MCL coexpression mm9:2293: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{MCL_coexpression_mm9 | {{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.262898873315649,-0.23959738979965,-0.178640716382255,-0.20198837261568,-0.272098397895188,-0.120992554404265,-0.114476759511432,-0.150456310198094,-0.139439369205689,-0.133788200480948,-0.178423051455981,-0.155956197753221,-0.227095461052502,-0.152432635979925,-0.24088192074645,-0.220565664074983,-0.272098397895188,-0.191330896727089,-0.178358900117072,-0.134653369210461,-0.0102655204111141,-0.153332527695322,-0.159213247412393,-0.144465700212391,-0.201406790700302,-0.18906638127852,-0.2046312383926,-0.217963655211197,-0.199583225416544,-0.210961681370102,-0.148629543568041,-0.272098397895188,-0.220050910759968,-0.272098397895188,-0.162934131283221,-0.13628259935775,-0.109500167456941,-0.272098397895188,-0.272098397895188,-0.272098397895188,-0.272098397895188,-0.215574434617285,-0.229129477170831,-0.0598801181359458,-0.0903236401876235,-0.057800855416356,0.0468910981624098,-0.138454217495898,-0.182069428017326,-0.13456740832423,-0.126104498620852,-0.272098397895188,-0.187759631265405,-0.174774784348079,-0.179591618417868,0.0375825757856804,0.190975910837428,0.112425815737533,0.13624858230571,0.0994703569728894,0.122252642279233,0.0293973609533722,0.08796366859963,-0.272098397895188,-0.272098397895188,-0.272098397895188,-0.132858748455293,-0.139598729501462,0.106446891764838,0.132185355167735,0.0751133905911602,0.0538953581680849,0.0967614264250017,0.0510296008412794,0.117970340601931,0.184216691817322,-0.14573229665466,-0.163792284826207,-0.108314833029422,0.100344443596291,0.140640345129179,0.174021214312395,-0.105717713888014,-0.22362514491044,-0.0860870139019873,0.199933947331,0.146084968891398,0.197898665686558,-0.156672961296564,-0.167525505343943,-0.0100270189416044,-0.204695421724945,-0.178873034814476,-0.00521055252252682,-0.127331276950004,-0.106782151133516,-0.0928039452065071,-0.0696450214896473,-0.125517803532024,-0.148558446269198,-0.040375809301351,-0.182459328774076,-0.134600891695683,-0.272098397895188,-0.139824214220484,-0.151849635551392,-0.183254492149198,-0.149815000358959,-0.133343573440986,-0.0257953798056691,0.213349804864072,0.111350647388886,0.0476189294775979,0.131165515895758,0.208172416038153,0.00299616395247967,-0.0495883143943148,-0.0912680833830226,-0.203292993293361,0.18301545010431,0.0354397020229361,-0.0887570913338948,-0.272098397895188,-0.104090259352313,0.0220571201901984,-0.151249490626475,-0.180821615227535,-0.272098397895188,-0.156272500070925,-0.0645893928545124,-0.119751763436645,0.119218843950814,-0.0987365713549073,-0.0572155121501468,-0.118529651052953,-0.0562303348621771,0.410666717539625,-0.0255186460090422,-0.137051591602472,-0.106941035696246,0.188473023640785,0.109176598246312,0.159087404407509,0.232995173921765,0.181889644885758,0.0692610241097735,0.0985696929283976,0.0581682667490784,0.301511042239969,0.503355839425303,0.55719899975735,0.367884698087994,0.489009783158762,0.310744451089781,0.221077819982199,0.637613360005641,-0.272098397895188,-0.227017041577641,-0.189664847970327,0.19517223197232,0.214637366518083,0.179945976016726,0.154656407464674,0.185774271256253,0.116652953407878,0.12840168558439,0.156921311205953,0.171524400945269,-0.00741882616895262,0.138963696315542,0.0465329196099167,0.0763650481230756,-0.0699509344036858,0.0813887110206283,-0.162765386382654,0.26227517086129,-0.21701660803242,-0.132255639148817,0.55865900573124,0.477799359272951,0.254004354128533,0.177299343170394,0.0594650490135383,0.078021685036357,-0.0407284600595193,-0.0213785394501978,-0.0153908862650133,0.144615022896931,0.0348763551976417,-0.160400486597745,-0.0167379311473803,-0.102274274418792,0.268083554773977,0.326388060566493,0.470607062008928,0.27324958680564,0.265975689875763,0.347333378757043,0.22917931594472,0.0629716173959761,0.0310249773065682,0.0795885298245315,-0.0899275501011424,0.0499141973465132,-0.0108313429184408,-0.0478753970355949,-0.0778384254530147,-0.0609174683549656,-0.0137080095224522,-0.0875116035993815,-0.103006856800703,0.0057745439833524,-0.0786098668399945,0.0640481172758216,0.0480540436014788,0.0167780876633597,-0.0441747421416095,-0.0511465817136359,-0.109568717745419,0.357229672923929,0.319755887846235,0.266443997589827,0.237513627972461,0.178365074604507,0.182753539842399,0.189452765689306,0.189451564226105,0.113205733828534,0.186513666207246,0.0829267492255006,0.0413196483357009,-0.00658680982088025,-0.272098397895188,-0.192175583423607,-0.154016922123605,-0.0537974342313683,-0.0503868750361122,-0.0382971503398856,-0.127527608639563,0.100511153209794,-0.0563925927003262,-0.0367936938953663,-0.0181563758827276,-0.035578693363096,0.00795378845629651,-0.0302854732861923,-0.0228059186990136,-0.0637600647914373,-0.123944483746952,-0.0404203242168138,0.136368050964987,0.519188474097185,0.471579205876807,0.259325080133461,-0.0886580888669479,0.267645488950541,0.264964194632788,0.212367008210449,0.204840119917377,0.241786929170135,0.184919781641884,0.174750611031854,0.251370231514201,0.073356842778235,0.00539454355105192,-0.150571898095911,-0.21571427138846,0.199764326352657,0.218214180307442,0.197980107696193,0.194060086813333,0.151583861933952,0.205391339684753,0.163776603127327,-0.153795039246688,-0.115253313880911,-0.0586423085765295,-0.0237079027510817,0.191023366152626,0.0862216077525089,0.0842938302827943,0.0089419038491341,-0.0203660859540836,-0.0674424174050708,-0.146780566566299,0.473803591988846,0.239789469493222,-0.0562680379553117,-0.067310589661924,-0.0854939749524008,-0.139878923576067,-0.119461782886054,-0.120492322772665,-0.083381336049981,0.495447939403553,0.318065728408651,0.351862005389783,0.190894336514316,0.213062953182438,0.150791007623496,0.230980094158567,0.0140671693056381,-0.0335724759640185,-0.184406636886767,-0.126626203057571,0.719564824992646,0.670413034448983,0.645615576671766,0.599199573573049,0.555685051597028,0.65420382002812,0.432280100221028,0.220716293377042,0.0359176259521132,-0.0354365803110435,-0.117322162856952,0.185438329185368,0.117489879955803,-0.00703745323256913,-0.0774181238395086,-0.0376740690193,-0.0911501635886919,-0.0799344327949336,-0.0757090547362755,-0.0604111847997025,-0.0952794969495612,-0.0734530008910516,-0.0610960563289786,-0.02129051034065,-0.0988113557446385,-0.232208711924552,-0.246220880557875,-0.194111461383255,-0.0118741043628832,0.0110846926223992,0.0650541763666184,-0.101490525394335,-0.0530376234441923,-0.107959199903626,-0.0531834075851826,-0.0651586767982288,-0.133047222720701,-0.272098397895188,-0.211004751844555,-0.179329353256412,-0.179286921201009,-0.178896751216738,-0.117760644432233,0.129149384119162,0.427710527375468,0.34221861197045,0.122282193934824,0.0318811439877065,0.124746028792574,0.0890880831247809,0.190398885948863,0.156165926867368,0.205969867287011,0.156158964129723,0.192283332439731,0.236563383648048,0.220178442546803,0.236311055487289,0.144062132932548,0.273151170078784,0.22361917703871,0.277985789709857,0.234497505454119,0.141291098955953,0.190170438750036,0.180269120980653,0.246593522998671,0.243471942201809,0.20505466561386,0.255920291898862,0.230658147422322,0.204147189802749,0.222561683723413,0.154157760031759,0.221793555631637,0.0423111056067257,0.226163848916092,0.160201293499246,0.289792049946164,0.256555915804403,0.113592580846102,0.314852047423652,0.189318183606253,0.189992382450289|coexpression_dpi_cluster_scores_median=0.238478326060838,-0.209146557493654,-0.193070147577409,-0.209146557493654,-0.209146557493654,-0.0777738236214298,-0.0647422338357628,-0.136701335209087,-0.114667453224277,-0.103365115774796,-0.192634817724861,-0.147701110319341,-0.209146557493654,-0.14065398677275,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.192506515047044,-0.105095453233822,0.010479917761174,-0.142453770203543,-0.154215209637685,-0.124720115237682,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.165658847601956,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.161656977379341,-0.1083539135284,-0.0547890497267816,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.106841521263554,-0.111320601520888,-0.0927845825797215,0.22430714777253,-0.123490299439499,-0.166022505532669,-0.1378173539782,-0.0608243866262893,-0.209146557493654,-0.209146557493654,-0.185338283509057,-0.194971951648636,0.0832899952637079,0.113305843040636,0.0667710436052938,0.165663533659163,0.116634794118897,0.128767916313656,0.0555119102784365,0.150915509001164,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.0699069080537592,-0.138544263401503,0.119090605326477,0.101486290830367,0.0318221317531163,0.0743172664923555,0.0387247193349924,0.0594211230952676,0.122153353935201,0.219874216111335,-0.127253308122219,-0.18305220543893,-0.110591571015909,0.088080710165716,0.105432177061809,0.126438466120242,-0.0472241425889267,-0.209146557493654,-0.0746961216596291,0.219765177939238,0.143971967302564,0.198396270613293,-0.178523565342914,-0.186659380619677,-0.0094900649930963,-0.209146557493654,-0.0449352723065536,-0.0449352723065536,-0.0449352723065536,-0.0493530170799307,-0.0977445647320696,-0.0449352723065536,-0.0868243218769481,-0.132905607351296,-0.0163222514091754,-0.200707372361052,-0.104990498204265,-0.209146557493654,-0.115437143253867,-0.139487985915683,-0.120302651747664,-0.158897150876633,-0.102475861694871,0.0115153404032151,0.176411971764268,0.0357844255250849,0.0374241654731111,0.123805948713815,0.233921192991217,0.00375120832941564,-0.109698799673962,-0.0476516303634646,-0.209146557493654,0.124287915266655,0.0302167524096791,-0.123301572805318,-0.209146557493654,-0.0997316797478411,0.0125237279673985,-0.138287696065849,-0.19743194526797,-0.209146557493654,-0.14833371495475,-0.0396039846072244,-0.0231267593242204,0.104605760805695,-0.0945236247854455,-0.0444242374354751,-0.0777843385315442,-0.0449352723065536,0.450420821874721,1.02699973376901e-05,-0.15881938171729,-0.0496707862053913,0.181546191302569,0.082147305731027,0.140963304064825,0.20768970457945,0.208455599187777,0.0425790223525704,0.0813008373952872,0.0955774299009846,0.274423853017295,0.46794490573667,0.515570449362962,0.329932837222978,0.461889913652639,0.260928015040125,0.160323702077177,0.612460022560891,-0.209146557493654,-0.209146557493654,-0.209146557493654,0.218160502351691,0.234589662945547,0.152482840324957,0.189397794086379,0.186673384197044,0.151122612685913,0.146921223528022,0.170480333514229,0.164243473676474,-0.0118543657942426,0.121200339719892,0.074039987285867,0.107340875405315,-0.0449352723065536,0.0801649405878443,-0.167701844245938,0.326760323129117,-0.209146557493654,-0.107244702101007,0.563354857771572,0.444083274081363,0.223370183200441,0.135588504689571,-0.0400243905885213,0.0902506586087334,-0.036521647812485,-0.0212079763205575,-0.00368918794653445,0.18292377665424,0.022681204228263,-0.156589688008389,-0.0313678460343746,-0.107436479460406,0.265865337166159,0.32555325280444,0.44117319269029,0.276861764458796,0.290379849260399,0.31354826558438,0.171978071535025,0.119219125155567,0.0460284305549539,0.0674468924337693,0.0055949695699655,0.0566405562020791,-0.0010156124898937,-0.0522575134345255,-0.09026183576525,-0.0449352723065536,-0.0116965417807077,-0.0657186185090465,-0.0802261688493502,0.0077451108232863,-0.0449352723065536,0.0522231703167647,0.053962554987554,0.0360985679992605,-0.01466258483307,-0.0398154003044734,-0.091740093699265,0.354528210206962,0.315811377774812,0.258545990104823,0.219391296388757,0.201285171811049,0.184880071690838,0.247027238086444,0.214274912824402,0.13954809969971,0.185939470974287,0.0808346328267257,0.0922090420810938,0.0654180761324375,-0.209146557493654,-0.209146557493654,-0.14382255906011,-0.00427745603469226,-0.0449352723065536,0.00079679583348047,-0.090843932092026,0.119600050288485,-0.0548030693475069,-0.0388942630910658,-0.0449352723065536,0.00159491233924189,-0.00125779273872497,-0.0449352723065536,0.0288736311816962,-0.0724413118849082,-0.0826502317883863,-0.0399698567429008,0.153352151134932,0.495984016394551,0.507190356503459,0.220782591410393,0.0192290238411397,0.286723222715082,0.300073156035391,0.207276564235086,0.203597371904287,0.250313137510385,0.159123815479576,0.225780993457742,0.245508688565154,0.0468421895099514,-0.007891393610568,-0.136932511004722,-0.209146557493654,0.179988018639645,0.212005785869528,0.170303269317327,0.205056246690951,0.129148019540988,0.247288713707284,0.141981197208631,-0.163370809193658,-0.0523014734793772,-0.0449352723065536,0.012571051595064,0.175248988663228,0.09032204326812,0.0603422564267377,-0.0119324985248335,-0.0413250161995842,-0.0886597309605126,-0.163604350627368,0.404869360711446,0.165811724638481,-0.00745971442746635,-0.0512693069661255,-0.0449352723065536,-0.115546561965034,-0.074712280585007,-0.0767733603582302,-0.103152907024581,0.500625286716673,0.324786076204004,0.348420851395402,0.185755433145386,0.207543781969399,0.133079076744071,0.241127429385869,0.0112119144107713,-0.0392832900631846,-0.204601988586433,-0.0890411209280413,0.663096002506741,0.634019678248616,0.57904002284729,0.578794588059505,0.48642074753291,0.624362711824124,0.381490023688341,0.166606149563587,0.0210825190165969,-0.0289778446672109,-0.0704330405268026,0.137520928228888,0.0703737403927781,-0.0209569325478876,-0.0561125843146126,-0.00558339729261485,-0.0449352723065536,-0.0784322753237622,-0.0449352723065536,-0.0141310823555015,-0.0472070844580599,-0.0449352723065536,-0.0249880277299815,-0.0209326175523686,-0.0689801459081876,-0.209146557493654,-0.209146557493654,-0.141746619641662,-0.0065805437237374,0.0520444183912626,0.0599924711850378,-0.101313880748403,-0.0449352723065536,-0.0450073595020919,-0.0449352723065536,0.052968283362479,-0.0449352723065536,-0.209146557493654,-0.0869592653923873,-0.0449352723065536,-0.194362557214918,-0.193582217246375,-0.0548088040306993,0.131989115837578,0.38365763642719,0.278943708283585,0.08835952559322,0.0724138088619515,0.138083633929015,0.014453919774563,0.190097211288722,0.133626135653472,0.211249320514587,0.160035955872717,0.147549480853699,0.226256909052043,0.180050099738098,0.224313854676582,0.167744813386657,0.280945303904939,0.188903761743749,0.304914107954894,0.15872602474981,0.169993418170129,0.171783736106142,0.126520217435395,0.24585307469572,0.204091585648626,0.19691478406105,0.228284225396218,0.249861221945315,0.175402820404891,0.215187774964753,0.13207270370646,0.201045088777912,-0.0414969913399294,0.213777513814174,0.117554027446339,0.226945945054798,0.235529414584997,0.0812527022386185,0.270960214229959,0.208873997427181,0.193667626720564|gostat_on_MCL_coexpression=GO:0030513;positive regulation of BMP signaling pathway;0.00328713088259464;!GO:0030510;regulation of BMP signaling pathway;0.00821782720648661;!GO:0030509;BMP signaling pathway;0.0105918661772494;!GO:0009967;positive regulation of signal transduction;0.0173122226483318;!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0173122226483318;!GO:0007167;enzyme linked receptor protein signaling pathway;0.0485764897094542;!|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000468!1.68e-09!333;UBERON:0002323!8.83e-07!37;UBERON:0004458!8.83e-07!37|tfbs_overrepresentation_for_novel_motifs=0.641384,0.402508,0.612053,0.688265,0.483253,1.67884,0.803568,0.370124,0.993085,0.949265,0.755749,0.790506,0.37041,0.81685,0.502646,0,1.02248,0.473993,0.352304,0.24402,0.570433,0.57409,0.815872,0.481455,0.620553,0.846564,1.62441,0.727368,0.535752,0.290745,0.711848,1.12823,0.471365,0.318879,0.503207,0.089443,0.460474,0.786577,0.434783,0.40068,0.478558,0.717547,1.04032,0.504971,0.66772,0.675898,0.938241,0.744678,0.162985,1.3327,1.0041,0.875451,0.282443,1.2746,1.29252,0.82458,0.549352,0.776619,0.882473,0.822375,1.10737,0.885556,1.02399,0.992216,0.8366,1.03484,1.43193,1.78579,1.1025,1.63712,0.590754,0.377213,0.593145,1.32691,0.323563,0.310084,0.318792,0.926147,1.08947,0.575233,0.37865,1.04072,0.884013,0.362446,1.20828,0.758875,0.129654,0.290918,0.943446,1.94914,1.50286,1.21342,1.14153,0.490141,0.430015,0.409166,0.367176,1.14445,0.938512,0.264911,0.460566,1.12793,1.25667,1.00472,1.00361,0.717061,1.06633,0.740267,0.580757,0.57247,0.633483,1.25851,0.576517,0.7614,1.51002,0.476467,0.442329,0.692434,1.02384,0.456123,1.33244,0.970073,0.848526,0.925183,1.56496,1.09333,0.812403,1.13449,1.43038,0.493609,1.23918,0.680176,1.40022,1.9576,1.53196,0.195549,0.650785,0.719099,1.482,2.31884,1.91709,1.43673,0.861473,1.1391,0.996781,0.718046,0.941555,2.27909,2.65949,0.485304,0.79777,0.184289,1.27621,0.416214,0.838313,1.35996,0.87653,0.516549,0.63863,0.650472,3.27965,1.20739,1.09379,0.630949,0.993294,0.830321,0.459159,0.788782,0.0824127|tfbs_overrepresentation_jaspar=MA0003.1;0.0356887,MA0004.1;0.6888,MA0006.1;0.497533,MA0007.1;0.672186,MA0009.1;2.60204,MA0014.1;0.581929,MA0017.1;0.528196,MA0019.1;0.964875,MA0024.1;1.11019,MA0025.1;1.39562,MA0027.1;2.81824,MA0028.1;0.509589,MA0029.1;1.08753,MA0030.1;1.09438,MA0031.1;1.05719,MA0038.1;0.846479,MA0040.1;1.16866,MA0041.1;0.604221,MA0042.1;0.589368,MA0043.1;1.25564,MA0046.1;1.1929,MA0048.1;0.266382,MA0050.1;0.731539,MA0051.1;0.856094,MA0052.1;1.17701,MA0055.1;0.125758,MA0056.1;0,MA0057.1;0.251896,MA0058.1;0.581673,MA0059.1;0.59559,MA0060.1;0.403071,MA0061.1;0.438628,MA0063.1;0,MA0066.1;0.834648,MA0067.1;1.50873,MA0068.1;0.256913,MA0069.1;1.17737,MA0070.1;1.16732,MA0071.1;0.73062,MA0072.1;1.15853,MA0073.1;10.0127,MA0074.1;0.795862,MA0076.1;0.550092,MA0077.1;1.13603,MA0078.1;0.891476,MA0081.1;0.621611,MA0083.1;1.25482,MA0084.1;1.84013,MA0087.1;1.21037,MA0088.1;0.201215,MA0089.1;0,MA0090.1;0.650768,MA0091.1;1.67688,MA0092.1;0.651119,MA0093.1;0.519148,MA0095.1;0,MA0098.1;0,MA0100.1;0.783305,MA0101.1;0.605676,MA0103.1;0.540576,MA0105.1;0.313353,MA0106.1;0.899777,MA0107.1;0.533522,MA0108.2;0.989014,MA0109.1;0,MA0111.1;0.666525,MA0113.1;0.869608,MA0114.1;0.43587,MA0115.1;1.25852,MA0116.1;2.15201,MA0117.1;1.22527,MA0119.1;0.606338,MA0122.1;1.24573,MA0124.1;1.45461,MA0125.1;1.37907,MA0130.1;0,MA0131.1;0.960068,MA0132.1;0,MA0133.1;0,MA0135.1;1.29308,MA0136.1;0.817395,MA0139.1;1.70536,MA0140.1;0.78318,MA0141.1;0.563066,MA0142.1;1.04199,MA0143.1;0.887119,MA0144.1;0.439506,MA0145.1;0.21199,MA0146.1;0.0944145,MA0147.1;0.453952,MA0148.1;0.706718,MA0149.1;0.611881,MA0062.2;0.856416,MA0035.2;0.788288,MA0039.2;2.95164,MA0138.2;0.951653,MA0002.2;0.368961,MA0137.2;0.559766,MA0104.2;1.0034,MA0047.2;0.845655,MA0112.2;0.211985,MA0065.2;0.212467,MA0150.1;0.67206,MA0151.1;0,MA0152.1;0.84577,MA0153.1;1.31015,MA0154.1;2.06517,MA0155.1;0.650923,MA0156.1;1.35382,MA0157.1;1.0083,MA0158.1;0,MA0159.1;0.465802,MA0160.1;0.71003,MA0161.1;0,MA0162.1;0.704935,MA0163.1;1.11502,MA0164.1;0.817786,MA0080.2;1.32296,MA0018.2;0.828253,MA0099.2;0.944966,MA0079.2;2.24437,MA0102.2;1.8929,MA0258.1;1.07695,MA0259.1;0.441366,MA0442.1;0}} | ||
|coexpression_dpi_cluster_scores_mean=0.262898873315649,-0.23959738979965,-0.178640716382255,-0.20198837261568,-0.272098397895188,-0.120992554404265,-0.114476759511432,-0.150456310198094,-0.139439369205689,-0.133788200480948,-0.178423051455981,-0.155956197753221,-0.227095461052502,-0.152432635979925,-0.24088192074645,-0.220565664074983,-0.272098397895188,-0.191330896727089,-0.178358900117072,-0.134653369210461,-0.0102655204111141,-0.153332527695322,-0.159213247412393,-0.144465700212391,-0.201406790700302,-0.18906638127852,-0.2046312383926,-0.217963655211197,-0.199583225416544,-0.210961681370102,-0.148629543568041,-0.272098397895188,-0.220050910759968,-0.272098397895188,-0.162934131283221,-0.13628259935775,-0.109500167456941,-0.272098397895188,-0.272098397895188,-0.272098397895188,-0.272098397895188,-0.215574434617285,-0.229129477170831,-0.0598801181359458,-0.0903236401876235,-0.057800855416356,0.0468910981624098,-0.138454217495898,-0.182069428017326,-0.13456740832423,-0.126104498620852,-0.272098397895188,-0.187759631265405,-0.174774784348079,-0.179591618417868,0.0375825757856804,0.190975910837428,0.112425815737533,0.13624858230571,0.0994703569728894,0.122252642279233,0.0293973609533722,0.08796366859963,-0.272098397895188,-0.272098397895188,-0.272098397895188,-0.132858748455293,-0.139598729501462,0.106446891764838,0.132185355167735,0.0751133905911602,0.0538953581680849,0.0967614264250017,0.0510296008412794,0.117970340601931,0.184216691817322,-0.14573229665466,-0.163792284826207,-0.108314833029422,0.100344443596291,0.140640345129179,0.174021214312395,-0.105717713888014,-0.22362514491044,-0.0860870139019873,0.199933947331,0.146084968891398,0.197898665686558,-0.156672961296564,-0.167525505343943,-0.0100270189416044,-0.204695421724945,-0.178873034814476,-0.00521055252252682,-0.127331276950004,-0.106782151133516,-0.0928039452065071,-0.0696450214896473,-0.125517803532024,-0.148558446269198,-0.040375809301351,-0.182459328774076,-0.134600891695683,-0.272098397895188,-0.139824214220484,-0.151849635551392,-0.183254492149198,-0.149815000358959,-0.133343573440986,-0.0257953798056691,0.213349804864072,0.111350647388886,0.0476189294775979,0.131165515895758,0.208172416038153,0.00299616395247967,-0.0495883143943148,-0.0912680833830226,-0.203292993293361,0.18301545010431,0.0354397020229361,-0.0887570913338948,-0.272098397895188,-0.104090259352313,0.0220571201901984,-0.151249490626475,-0.180821615227535,-0.272098397895188,-0.156272500070925,-0.0645893928545124,-0.119751763436645,0.119218843950814,-0.0987365713549073,-0.0572155121501468,-0.118529651052953,-0.0562303348621771,0.410666717539625,-0.0255186460090422,-0.137051591602472,-0.106941035696246,0.188473023640785,0.109176598246312,0.159087404407509,0.232995173921765,0.181889644885758,0.0692610241097735,0.0985696929283976,0.0581682667490784,0.301511042239969,0.503355839425303,0.55719899975735,0.367884698087994,0.489009783158762,0.310744451089781,0.221077819982199,0.637613360005641,-0.272098397895188,-0.227017041577641,-0.189664847970327,0.19517223197232,0.214637366518083,0.179945976016726,0.154656407464674,0.185774271256253,0.116652953407878,0.12840168558439,0.156921311205953,0.171524400945269,-0.00741882616895262,0.138963696315542,0.0465329196099167,0.0763650481230756,-0.0699509344036858,0.0813887110206283,-0.162765386382654,0.26227517086129,-0.21701660803242,-0.132255639148817,0.55865900573124,0.477799359272951,0.254004354128533,0.177299343170394,0.0594650490135383,0.078021685036357,-0.0407284600595193,-0.0213785394501978,-0.0153908862650133,0.144615022896931,0.0348763551976417,-0.160400486597745,-0.0167379311473803,-0.102274274418792,0.268083554773977,0.326388060566493,0.470607062008928,0.27324958680564,0.265975689875763,0.347333378757043,0.22917931594472,0.0629716173959761,0.0310249773065682,0.0795885298245315,-0.0899275501011424,0.0499141973465132,-0.0108313429184408,-0.0478753970355949,-0.0778384254530147,-0.0609174683549656,-0.0137080095224522,-0.0875116035993815,-0.103006856800703,0.0057745439833524,-0.0786098668399945,0.0640481172758216,0.0480540436014788,0.0167780876633597,-0.0441747421416095,-0.0511465817136359,-0.109568717745419,0.357229672923929,0.319755887846235,0.266443997589827,0.237513627972461,0.178365074604507,0.182753539842399,0.189452765689306,0.189451564226105,0.113205733828534,0.186513666207246,0.0829267492255006,0.0413196483357009,-0.00658680982088025,-0.272098397895188,-0.192175583423607,-0.154016922123605,-0.0537974342313683,-0.0503868750361122,-0.0382971503398856,-0.127527608639563,0.100511153209794,-0.0563925927003262,-0.0367936938953663,-0.0181563758827276,-0.035578693363096,0.00795378845629651,-0.0302854732861923,-0.0228059186990136,-0.0637600647914373,-0.123944483746952,-0.0404203242168138,0.136368050964987,0.519188474097185,0.471579205876807,0.259325080133461,-0.0886580888669479,0.267645488950541,0.264964194632788,0.212367008210449,0.204840119917377,0.241786929170135,0.184919781641884,0.174750611031854,0.251370231514201,0.073356842778235,0.00539454355105192,-0.150571898095911,-0.21571427138846,0.199764326352657,0.218214180307442,0.197980107696193,0.194060086813333,0.151583861933952,0.205391339684753,0.163776603127327,-0.153795039246688,-0.115253313880911,-0.0586423085765295,-0.0237079027510817,0.191023366152626,0.0862216077525089,0.0842938302827943,0.0089419038491341,-0.0203660859540836,-0.0674424174050708,-0.146780566566299,0.473803591988846,0.239789469493222,-0.0562680379553117,-0.067310589661924,-0.0854939749524008,-0.139878923576067,-0.119461782886054,-0.120492322772665,-0.083381336049981,0.495447939403553,0.318065728408651,0.351862005389783,0.190894336514316,0.213062953182438,0.150791007623496,0.230980094158567,0.0140671693056381,-0.0335724759640185,-0.184406636886767,-0.126626203057571,0.719564824992646,0.670413034448983,0.645615576671766,0.599199573573049,0.555685051597028,0.65420382002812,0.432280100221028,0.220716293377042,0.0359176259521132,-0.0354365803110435,-0.117322162856952,0.185438329185368,0.117489879955803,-0.00703745323256913,-0.0774181238395086,-0.0376740690193,-0.0911501635886919,-0.0799344327949336,-0.0757090547362755,-0.0604111847997025,-0.0952794969495612,-0.0734530008910516,-0.0610960563289786,-0.02129051034065,-0.0988113557446385,-0.232208711924552,-0.246220880557875,-0.194111461383255,-0.0118741043628832,0.0110846926223992,0.0650541763666184,-0.101490525394335,-0.0530376234441923,-0.107959199903626,-0.0531834075851826,-0.0651586767982288,-0.133047222720701,-0.272098397895188,-0.211004751844555,-0.179329353256412,-0.179286921201009,-0.178896751216738,-0.117760644432233,0.129149384119162,0.427710527375468,0.34221861197045,0.122282193934824,0.0318811439877065,0.124746028792574,0.0890880831247809,0.190398885948863,0.156165926867368,0.205969867287011,0.156158964129723,0.192283332439731,0.236563383648048,0.220178442546803,0.236311055487289,0.144062132932548,0.273151170078784,0.22361917703871,0.277985789709857,0.234497505454119,0.141291098955953,0.190170438750036,0.180269120980653,0.246593522998671,0.243471942201809,0.20505466561386,0.255920291898862,0.230658147422322,0.204147189802749,0.222561683723413,0.154157760031759,0.221793555631637,0.0423111056067257,0.226163848916092,0.160201293499246,0.289792049946164,0.256555915804403,0.113592580846102,0.314852047423652,0.189318183606253,0.189992382450289 | |||
|coexpression_dpi_cluster_scores_median=0.238478326060838,-0.209146557493654,-0.193070147577409,-0.209146557493654,-0.209146557493654,-0.0777738236214298,-0.0647422338357628,-0.136701335209087,-0.114667453224277,-0.103365115774796,-0.192634817724861,-0.147701110319341,-0.209146557493654,-0.14065398677275,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.192506515047044,-0.105095453233822,0.010479917761174,-0.142453770203543,-0.154215209637685,-0.124720115237682,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.165658847601956,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.161656977379341,-0.1083539135284,-0.0547890497267816,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.106841521263554,-0.111320601520888,-0.0927845825797215,0.22430714777253,-0.123490299439499,-0.166022505532669,-0.1378173539782,-0.0608243866262893,-0.209146557493654,-0.209146557493654,-0.185338283509057,-0.194971951648636,0.0832899952637079,0.113305843040636,0.0667710436052938,0.165663533659163,0.116634794118897,0.128767916313656,0.0555119102784365,0.150915509001164,-0.209146557493654,-0.209146557493654,-0.209146557493654,-0.0699069080537592,-0.138544263401503,0.119090605326477,0.101486290830367,0.0318221317531163,0.0743172664923555,0.0387247193349924,0.0594211230952676,0.122153353935201,0.219874216111335,-0.127253308122219,-0.18305220543893,-0.110591571015909,0.088080710165716,0.105432177061809,0.126438466120242,-0.0472241425889267,-0.209146557493654,-0.0746961216596291,0.219765177939238,0.143971967302564,0.198396270613293,-0.178523565342914,-0.186659380619677,-0.0094900649930963,-0.209146557493654,-0.0449352723065536,-0.0449352723065536,-0.0449352723065536,-0.0493530170799307,-0.0977445647320696,-0.0449352723065536,-0.0868243218769481,-0.132905607351296,-0.0163222514091754,-0.200707372361052,-0.104990498204265,-0.209146557493654,-0.115437143253867,-0.139487985915683,-0.120302651747664,-0.158897150876633,-0.102475861694871,0.0115153404032151,0.176411971764268,0.0357844255250849,0.0374241654731111,0.123805948713815,0.233921192991217,0.00375120832941564,-0.109698799673962,-0.0476516303634646,-0.209146557493654,0.124287915266655,0.0302167524096791,-0.123301572805318,-0.209146557493654,-0.0997316797478411,0.0125237279673985,-0.138287696065849,-0.19743194526797,-0.209146557493654,-0.14833371495475,-0.0396039846072244,-0.0231267593242204,0.104605760805695,-0.0945236247854455,-0.0444242374354751,-0.0777843385315442,-0.0449352723065536,0.450420821874721,1.02699973376901e-05,-0.15881938171729,-0.0496707862053913,0.181546191302569,0.082147305731027,0.140963304064825,0.20768970457945,0.208455599187777,0.0425790223525704,0.0813008373952872,0.0955774299009846,0.274423853017295,0.46794490573667,0.515570449362962,0.329932837222978,0.461889913652639,0.260928015040125,0.160323702077177,0.612460022560891,-0.209146557493654,-0.209146557493654,-0.209146557493654,0.218160502351691,0.234589662945547,0.152482840324957,0.189397794086379,0.186673384197044,0.151122612685913,0.146921223528022,0.170480333514229,0.164243473676474,-0.0118543657942426,0.121200339719892,0.074039987285867,0.107340875405315,-0.0449352723065536,0.0801649405878443,-0.167701844245938,0.326760323129117,-0.209146557493654,-0.107244702101007,0.563354857771572,0.444083274081363,0.223370183200441,0.135588504689571,-0.0400243905885213,0.0902506586087334,-0.036521647812485,-0.0212079763205575,-0.00368918794653445,0.18292377665424,0.022681204228263,-0.156589688008389,-0.0313678460343746,-0.107436479460406,0.265865337166159,0.32555325280444,0.44117319269029,0.276861764458796,0.290379849260399,0.31354826558438,0.171978071535025,0.119219125155567,0.0460284305549539,0.0674468924337693,0.0055949695699655,0.0566405562020791,-0.0010156124898937,-0.0522575134345255,-0.09026183576525,-0.0449352723065536,-0.0116965417807077,-0.0657186185090465,-0.0802261688493502,0.0077451108232863,-0.0449352723065536,0.0522231703167647,0.053962554987554,0.0360985679992605,-0.01466258483307,-0.0398154003044734,-0.091740093699265,0.354528210206962,0.315811377774812,0.258545990104823,0.219391296388757,0.201285171811049,0.184880071690838,0.247027238086444,0.214274912824402,0.13954809969971,0.185939470974287,0.0808346328267257,0.0922090420810938,0.0654180761324375,-0.209146557493654,-0.209146557493654,-0.14382255906011,-0.00427745603469226,-0.0449352723065536,0.00079679583348047,-0.090843932092026,0.119600050288485,-0.0548030693475069,-0.0388942630910658,-0.0449352723065536,0.00159491233924189,-0.00125779273872497,-0.0449352723065536,0.0288736311816962,-0.0724413118849082,-0.0826502317883863,-0.0399698567429008,0.153352151134932,0.495984016394551,0.507190356503459,0.220782591410393,0.0192290238411397,0.286723222715082,0.300073156035391,0.207276564235086,0.203597371904287,0.250313137510385,0.159123815479576,0.225780993457742,0.245508688565154,0.0468421895099514,-0.007891393610568,-0.136932511004722,-0.209146557493654,0.179988018639645,0.212005785869528,0.170303269317327,0.205056246690951,0.129148019540988,0.247288713707284,0.141981197208631,-0.163370809193658,-0.0523014734793772,-0.0449352723065536,0.012571051595064,0.175248988663228,0.09032204326812,0.0603422564267377,-0.0119324985248335,-0.0413250161995842,-0.0886597309605126,-0.163604350627368,0.404869360711446,0.165811724638481,-0.00745971442746635,-0.0512693069661255,-0.0449352723065536,-0.115546561965034,-0.074712280585007,-0.0767733603582302,-0.103152907024581,0.500625286716673,0.324786076204004,0.348420851395402,0.185755433145386,0.207543781969399,0.133079076744071,0.241127429385869,0.0112119144107713,-0.0392832900631846,-0.204601988586433,-0.0890411209280413,0.663096002506741,0.634019678248616,0.57904002284729,0.578794588059505,0.48642074753291,0.624362711824124,0.381490023688341,0.166606149563587,0.0210825190165969,-0.0289778446672109,-0.0704330405268026,0.137520928228888,0.0703737403927781,-0.0209569325478876,-0.0561125843146126,-0.00558339729261485,-0.0449352723065536,-0.0784322753237622,-0.0449352723065536,-0.0141310823555015,-0.0472070844580599,-0.0449352723065536,-0.0249880277299815,-0.0209326175523686,-0.0689801459081876,-0.209146557493654,-0.209146557493654,-0.141746619641662,-0.0065805437237374,0.0520444183912626,0.0599924711850378,-0.101313880748403,-0.0449352723065536,-0.0450073595020919,-0.0449352723065536,0.052968283362479,-0.0449352723065536,-0.209146557493654,-0.0869592653923873,-0.0449352723065536,-0.194362557214918,-0.193582217246375,-0.0548088040306993,0.131989115837578,0.38365763642719,0.278943708283585,0.08835952559322,0.0724138088619515,0.138083633929015,0.014453919774563,0.190097211288722,0.133626135653472,0.211249320514587,0.160035955872717,0.147549480853699,0.226256909052043,0.180050099738098,0.224313854676582,0.167744813386657,0.280945303904939,0.188903761743749,0.304914107954894,0.15872602474981,0.169993418170129,0.171783736106142,0.126520217435395,0.24585307469572,0.204091585648626,0.19691478406105,0.228284225396218,0.249861221945315,0.175402820404891,0.215187774964753,0.13207270370646,0.201045088777912,-0.0414969913399294,0.213777513814174,0.117554027446339,0.226945945054798,0.235529414584997,0.0812527022386185,0.270960214229959,0.208873997427181,0.193667626720564 | |||
|gostat_on_MCL_coexpression=GO:0030513;positive regulation of BMP signaling pathway;0.00328713088259464;!GO:0030510;regulation of BMP signaling pathway;0.00821782720648661;!GO:0030509;BMP signaling pathway;0.0105918661772494;!GO:0009967;positive regulation of signal transduction;0.0173122226483318;!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0173122226483318;!GO:0007167;enzyme linked receptor protein signaling pathway;0.0485764897094542;! | |||
}} |
Latest revision as of 18:18, 17 September 2013
Phase1 CAGE Peaks
Short description | |
---|---|
Mm9::chr1:164147618..164147639,+ | p2@Dnm3os |
Mm9::chr6:29457946..29457974,- | p1@Kcp |
Mm9::chr6:29457979..29457992,- | p2@Kcp |
Mm9::chrX:92640128..92640168,- | p1@Fam123b |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
GO ID | GO name | FDR corrected p-value |
---|---|---|
GO:0030513 | positive regulation of BMP signaling pathway | 0.00328713088259464 |
GO:0030510 | regulation of BMP signaling pathway | 0.00821782720648661 |
GO:0030509 | BMP signaling pathway | 0.0105918661772494 |
GO:0009967 | positive regulation of signal transduction | 0.0173122226483318 |
GO:0007178 | transmembrane receptor protein serine/threonine kinase signaling pathway | 0.0173122226483318 |
GO:0007167 | enzyme linked receptor protein signaling pathway | 0.0485764897094542 |
Relative expression of the co-expression cluster over median <br>Analyst:
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
multi-cellular organism | 1.68e-09 | 333 |
body cavity | 8.83e-07 | 37 |
body cavity or lining | 8.83e-07 | 37 |
TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.0356887 |
MA0004.1 | 0.6888 |
MA0006.1 | 0.497533 |
MA0007.1 | 0.672186 |
MA0009.1 | 2.60204 |
MA0014.1 | 0.581929 |
MA0017.1 | 0.528196 |
MA0019.1 | 0.964875 |
MA0024.1 | 1.11019 |
MA0025.1 | 1.39562 |
MA0027.1 | 2.81824 |
MA0028.1 | 0.509589 |
MA0029.1 | 1.08753 |
MA0030.1 | 1.09438 |
MA0031.1 | 1.05719 |
MA0038.1 | 0.846479 |
MA0040.1 | 1.16866 |
MA0041.1 | 0.604221 |
MA0042.1 | 0.589368 |
MA0043.1 | 1.25564 |
MA0046.1 | 1.1929 |
MA0048.1 | 0.266382 |
MA0050.1 | 0.731539 |
MA0051.1 | 0.856094 |
MA0052.1 | 1.17701 |
MA0055.1 | 0.125758 |
MA0056.1 | 0 |
MA0057.1 | 0.251896 |
MA0058.1 | 0.581673 |
MA0059.1 | 0.59559 |
MA0060.1 | 0.403071 |
MA0061.1 | 0.438628 |
MA0063.1 | 0 |
MA0066.1 | 0.834648 |
MA0067.1 | 1.50873 |
MA0068.1 | 0.256913 |
MA0069.1 | 1.17737 |
MA0070.1 | 1.16732 |
MA0071.1 | 0.73062 |
MA0072.1 | 1.15853 |
MA0073.1 | 10.0127 |
MA0074.1 | 0.795862 |
MA0076.1 | 0.550092 |
MA0077.1 | 1.13603 |
MA0078.1 | 0.891476 |
MA0081.1 | 0.621611 |
MA0083.1 | 1.25482 |
MA0084.1 | 1.84013 |
MA0087.1 | 1.21037 |
MA0088.1 | 0.201215 |
MA0089.1 | 0 |
MA0090.1 | 0.650768 |
MA0091.1 | 1.67688 |
MA0092.1 | 0.651119 |
MA0093.1 | 0.519148 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.783305 |
MA0101.1 | 0.605676 |
MA0103.1 | 0.540576 |
MA0105.1 | 0.313353 |
MA0106.1 | 0.899777 |
MA0107.1 | 0.533522 |
MA0108.2 | 0.989014 |
MA0109.1 | 0 |
MA0111.1 | 0.666525 |
MA0113.1 | 0.869608 |
MA0114.1 | 0.43587 |
MA0115.1 | 1.25852 |
MA0116.1 | 2.15201 |
MA0117.1 | 1.22527 |
MA0119.1 | 0.606338 |
MA0122.1 | 1.24573 |
MA0124.1 | 1.45461 |
MA0125.1 | 1.37907 |
MA0130.1 | 0 |
MA0131.1 | 0.960068 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.29308 |
MA0136.1 | 0.817395 |
MA0139.1 | 1.70536 |
MA0140.1 | 0.78318 |
MA0141.1 | 0.563066 |
MA0142.1 | 1.04199 |
MA0143.1 | 0.887119 |
MA0144.1 | 0.439506 |
MA0145.1 | 0.21199 |
MA0146.1 | 0.0944145 |
MA0147.1 | 0.453952 |
MA0148.1 | 0.706718 |
MA0149.1 | 0.611881 |
MA0062.2 | 0.856416 |
MA0035.2 | 0.788288 |
MA0039.2 | 2.95164 |
MA0138.2 | 0.951653 |
MA0002.2 | 0.368961 |
MA0137.2 | 0.559766 |
MA0104.2 | 1.0034 |
MA0047.2 | 0.845655 |
MA0112.2 | 0.211985 |
MA0065.2 | 0.212467 |
MA0150.1 | 0.67206 |
MA0151.1 | 0 |
MA0152.1 | 0.84577 |
MA0153.1 | 1.31015 |
MA0154.1 | 2.06517 |
MA0155.1 | 0.650923 |
MA0156.1 | 1.35382 |
MA0157.1 | 1.0083 |
MA0158.1 | 0 |
MA0159.1 | 0.465802 |
MA0160.1 | 0.71003 |
MA0161.1 | 0 |
MA0162.1 | 0.704935 |
MA0163.1 | 1.11502 |
MA0164.1 | 0.817786 |
MA0080.2 | 1.32296 |
MA0018.2 | 0.828253 |
MA0099.2 | 0.944966 |
MA0079.2 | 2.24437 |
MA0102.2 | 1.8929 |
MA0258.1 | 1.07695 |
MA0259.1 | 0.441366 |
MA0442.1 | 0 |