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FFCP PHASE1:Mm9::chr18:77803981..77804009,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225743
|EntrezGene=225743
|HGNC=
|HGNC=
|MCL_coexpression_id=100
|MCL_coexpression_id=100
|TSSclassifier=NA
|UniProt=E9QAU8
|UniProt=E9QAU8
|association_with_transcript=-106bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end
|association_with_transcript=-106bp_to_ENSMUST00000026494,NM_001164504,uc008frj.2,uc008frm.2_5end
|cluster_id=chr18:77803981..77804009,-
|description=CAGE_peak_5_at_Rnf165_5end
|description=CAGE_peak_5_at_Rnf165_5end
|id=chr18:77803981..77804009,-
|id=chr18:77803981..77804009,-
|ontology_enrichment_celltype=CL:0000540!6.33e-17!33;CL:0000047!6.33e-17!33;CL:0000031!6.33e-17!33;CL:0000404!6.33e-17!33;CL:0000221!5.95e-14!44;CL:0000133!5.95e-14!44;CL:0002319!1.80e-13!43;CL:0000393!8.66e-13!39;CL:0000211!8.66e-13!39;CL:0000117!8.02e-11!23;CL:0000337!8.02e-11!23;CL:0000055!4.66e-10!50;CL:0000107!7.75e-07!9
|ontology_enrichment_celltype=CL:0000540!6.33e-17!33;CL:0000047!6.33e-17!33;CL:0000031!6.33e-17!33;CL:0000404!6.33e-17!33;CL:0000221!5.95e-14!44;CL:0000133!5.95e-14!44;CL:0002319!1.80e-13!43;CL:0000393!8.66e-13!39;CL:0000211!8.66e-13!39;CL:0000117!8.02e-11!23;CL:0000337!8.02e-11!23;CL:0000055!4.66e-10!50;CL:0000107!7.75e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,7.79e-23,33;CL:0000047,7.79e-23,33;CL:0000031,7.79e-23,33;CL:0000404,7.79e-23,33;CL:0000393,2.82e-18,39;CL:0000211,2.82e-18,39;CL:0000221,7.77e-17,44;CL:0000133,7.77e-17,44;CL:0002319,5.92e-16,43;CL:0000107,5.85e-13,9;CL:0002609,7.85e-12,6;CL:0000117,3.21e-11,23;CL:0000337,3.21e-11,23;CL:0002321,3.82e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.85e-20!102;UBERON:0000924!1.85e-20!102;UBERON:0006601!1.85e-20!102;UBERON:0001017!1.88e-18!73;UBERON:0005743!1.88e-18!73;UBERON:0000073!2.77e-17!75;UBERON:0001016!2.77e-17!75;UBERON:0002346!1.18e-16!71;UBERON:0003075!1.18e-16!71;UBERON:0007284!1.18e-16!71;UBERON:0003056!6.03e-15!49;UBERON:0000033!1.25e-14!63;UBERON:0002020!7.80e-14!34;UBERON:0002791!3.52e-12!29;UBERON:0003528!3.52e-12!29;UBERON:0001893!3.52e-12!29;UBERON:0001049!7.08e-11!52;UBERON:0005068!7.08e-11!52;UBERON:0006241!7.08e-11!52;UBERON:0007135!7.08e-11!52;UBERON:0002780!1.06e-10!39;UBERON:0001890!1.06e-10!39;UBERON:0006240!1.06e-10!39;UBERON:0003080!1.24e-10!40;UBERON:0000956!7.86e-10!21;UBERON:0001869!7.86e-10!21;UBERON:0000203!7.86e-10!21;UBERON:0000955!8.38e-10!50;UBERON:0006238!8.38e-10!50;UBERON:0002616!2.26e-09!49;UBERON:0002619!1.64e-07!17;UBERON:0002410!7.75e-07!9
|ontology_enrichment_uberon=UBERON:0004121!1.85e-20!102;UBERON:0000924!1.85e-20!102;UBERON:0006601!1.85e-20!102;UBERON:0001017!1.88e-18!73;UBERON:0005743!1.88e-18!73;UBERON:0000073!2.77e-17!75;UBERON:0001016!2.77e-17!75;UBERON:0002346!1.18e-16!71;UBERON:0003075!1.18e-16!71;UBERON:0007284!1.18e-16!71;UBERON:0003056!6.03e-15!49;UBERON:0000033!1.25e-14!63;UBERON:0002020!7.80e-14!34;UBERON:0002791!3.52e-12!29;UBERON:0003528!3.52e-12!29;UBERON:0001893!3.52e-12!29;UBERON:0001049!7.08e-11!52;UBERON:0005068!7.08e-11!52;UBERON:0006241!7.08e-11!52;UBERON:0007135!7.08e-11!52;UBERON:0002780!1.06e-10!39;UBERON:0001890!1.06e-10!39;UBERON:0006240!1.06e-10!39;UBERON:0003080!1.24e-10!40;UBERON:0000956!7.86e-10!21;UBERON:0001869!7.86e-10!21;UBERON:0000203!7.86e-10!21;UBERON:0000955!8.38e-10!50;UBERON:0006238!8.38e-10!50;UBERON:0002616!2.26e-09!49;UBERON:0002619!1.64e-07!17;UBERON:0002410!7.75e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.78e-27,95;UBERON:0000924,2.78e-27,95;UBERON:0006601,2.78e-27,95;UBERON:0003056,2.98e-24,49;UBERON:0001017,1.67e-22,73;UBERON:0002346,2.54e-22,64;UBERON:0003075,2.54e-22,64;UBERON:0007284,2.54e-22,64;UBERON:0001016,1.24e-21,75;UBERON:0010371,5.21e-21,73;UBERON:0003528,3.68e-17,29;UBERON:0002791,3.68e-17,29;UBERON:0001893,3.68e-17,29;UBERON:0002780,1.08e-15,39;UBERON:0001890,1.08e-15,39;UBERON:0006240,1.08e-15,39;UBERON:0002020,1.49e-15,34;UBERON:0003080,3.80e-15,40;UBERON:0000956,5.36e-15,21;UBERON:0001869,5.36e-15,21;UBERON:0000203,5.36e-15,21;UBERON:0010314,1.17e-14,92;UBERON:0000955,3.49e-13,47;UBERON:0006238,3.49e-13,47;UBERON:0002410,5.85e-13,9;UBERON:0002616,2.26e-12,46;UBERON:0000020,4.27e-12,12;UBERON:0001032,4.27e-12,12;UBERON:0004456,4.27e-12,12;UBERON:0001049,1.85e-11,52;UBERON:0005068,1.85e-11,52;UBERON:0006241,1.85e-11,52;UBERON:0007135,1.85e-11,52;UBERON:0002619,1.93e-11,17;UBERON:0000970,2.57e-11,9;UBERON:0000019,2.57e-11,9;UBERON:0000047,2.57e-11,9;UBERON:0010312,2.57e-11,9;UBERON:0004088,2.57e-11,9;UBERON:0002104,2.57e-11,9;UBERON:0001456,2.57e-11,9;UBERON:0003072,2.57e-11,9;UBERON:0004128,2.57e-11,9;UBERON:0003071,2.57e-11,9;UBERON:0000033,5.50e-11,13;UBERON:0005085,5.50e-11,13;UBERON:0000073,8.34e-11,54;UBERON:0000010,2.96e-10,11;UBERON:0001444,5.96e-09,11
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0,0,0,0.257259436035947,0,0,7.89034197352431,3.1739458756322,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,10.1615820062308,13.2305819565057,7.15104868594699,0.571301968807607,0.220868540951614,10.4117179332711,9.87208351487835,6.43453150627015,0,0.893811366596314,0.921639199537461,8.17694983927202,7.86793734980723,4.68822033501084,0.279182999001381,0.56276261003168,0,0.883885756421003,0.854230084794618,2.60959224155421,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,2.63874139437015,0.347648640384553,0.511430914660661,0.62336413367868,1.62241263067758,0.203678727700633,0,0,0,1.56144531555244,5.0578462975364,3.24111833649629,4.21973489940002,6.5995404176788,5.63700369253339,5.34099829990454,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0,0,0,0,0,0,0,2.3131894342054,4.83651678182637,0,0.264450566663544,0.853153002140936,0.696710015581316,0.77320476793256,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.569003702859245,0.571242563048644,0,0.814605311381257,0.193952487167626,0.210407459670956,0.569128834118316,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,1.89304931649754,1.56175497718655,1.29254038639679,1.43381278771531,2.22798674082394,4.24614796183249,3.23848561339915,2.33804686329049,3.95287777946523,1.28528526568723,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0,0,0,0,2.52085531643834,1.16422815404479,0,0,0,0.493647061806363,0,0.469343416127421,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0.632671987162271,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.84130094602871,1.71868654031819,1.71853182343688,1.37016503954128,0,0.675022500231806,1.35096360967266,0,1.03552062350364,4.15149390336707,3.19219898720825,2.56100408631201,0.972426868273176,0.628839487883947,0.551530525350042,0,1.44224540067226,0.64183841918363,1.26348605881899,1.01391719956096,0.943131706930381,1.31098110457835,0.89635213366817,0.804096565378586,0,1.39061191133827,0.38581844092741,0,0.588795680537589,0,0.70990322463735,0.715308569841963,0.726732083161643,0.658765662907314,0.507687647350059,1.09756783723664,0.789209134313529,1.08643291076689,1.12228454331548,0.711810108745045,0.886540341380071,0.818462086339379,0.929621047115796,0.771626443924566,1.74867404556562,0.467863216890817,0,0.57386499620653,0.661774257358546,0.231867835620421
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.58328969722285,0,0,0,0,0,0.257259436035947,0,0,7.89034197352431,3.1739458756322,5.07065122804943,0,0,0,0,0,0.299600110518405,0.384218305321555,10.1615820062308,13.2305819565057,7.15104868594699,0.571301968807607,0.220868540951614,10.4117179332711,9.87208351487835,6.43453150627015,0,0.893811366596314,0.921639199537461,8.17694983927202,7.86793734980723,4.68822033501084,0.279182999001381,0.56276261003168,0,0.883885756421003,0.854230084794618,2.60959224155421,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,2.63874139437015,0.347648640384553,0.511430914660661,0.62336413367868,1.62241263067758,0.203678727700633,0,0,0,1.56144531555244,5.0578462975364,3.24111833649629,4.21973489940002,6.5995404176788,5.63700369253339,5.34099829990454,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0.796137067273973,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0,0,0,0,0,0,0,2.3131894342054,4.83651678182637,0,0.264450566663544,0.853153002140936,0.696710015581316,0.77320476793256,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.569003702859245,0.571242563048644,0,0.814605311381257,0.193952487167626,0.210407459670956,0.569128834118316,0,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0,0.157635144106191,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,1.89304931649754,1.56175497718655,1.29254038639679,1.43381278771531,2.22798674082394,4.24614796183249,3.23848561339915,2.33804686329049,3.95287777946523,1.28528526568723,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0,0,0,0,2.52085531643834,1.16422815404479,0,0,0,0.493647061806363,0,0.469343416127421,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0.632671987162271,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.205421914329655,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.84130094602871,1.71868654031819,1.71853182343688,1.37016503954128,0,0.675022500231806,1.35096360967266,0,1.03552062350364,4.15149390336707,3.19219898720825,2.56100408631201,0.972426868273176,0.628839487883947,0.551530525350042,0,1.44224540067226,0.64183841918363,1.26348605881899,1.01391719956096,0.943131706930381,1.31098110457835,0.89635213366817,0.804096565378586,0,1.39061191133827,0.38581844092741,0,0.588795680537589,0,0.70990322463735,0.715308569841963,0.726732083161643,0.658765662907314,0.507687647350059,1.09756783723664,0.789209134313529,1.08643291076689,1.12228454331548,0.711810108745045,0.886540341380071,0.818462086339379,0.929621047115796,0.771626443924566,1.74867404556562,0.467863216890817,0,0.57386499620653,0.661774257358546,0.231867835620421
|short_description=p5@Rnf165
|short_description=p5@Rnf165
}}
}}

Latest revision as of 18:05, 1 October 2015

Short description:p5@Rnf165
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rnf165_5end
Coexpression cluster:MCL_coexpression_mm9:100
Association with transcript: -106bp_to_ENSMUST00000026494, NM_001164504, uc008frj.2, uc008frm.2_5end
EntrezGene:Rnf165
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Rnf165

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.16
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.23
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.87
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.78e-2795
ectoderm2.78e-2795
presumptive ectoderm2.78e-2795
pre-chordal neural plate2.98e-2449
central nervous system1.67e-2273
neurectoderm2.54e-2264
neural plate2.54e-2264
presumptive neural plate2.54e-2264
nervous system1.24e-2175
ecto-epithelium5.21e-2173
brain grey matter3.68e-1729
regional part of telencephalon3.68e-1729
telencephalon3.68e-1729
regional part of forebrain1.08e-1539
forebrain1.08e-1539
future forebrain1.08e-1539
gray matter1.49e-1534
anterior neural tube3.80e-1540
cerebral cortex5.36e-1521
cerebral hemisphere5.36e-1521
pallium5.36e-1521
structure with developmental contribution from neural crest1.17e-1492
brain3.49e-1347
future brain3.49e-1347
autonomic nervous system5.85e-139
regional part of brain2.26e-1246
sense organ4.27e-1212
sensory system4.27e-1212
entire sense organ system4.27e-1212
neural tube1.85e-1152
neural rod1.85e-1152
future spinal cord1.85e-1152
neural keel1.85e-1152
regional part of cerebral cortex1.93e-1117
eye2.57e-119
camera-type eye2.57e-119
simple eye2.57e-119
immature eye2.57e-119
ocular region2.57e-119
visual system2.57e-119
face2.57e-119
optic cup2.57e-119
optic vesicle2.57e-119
eye primordium2.57e-119
head5.50e-1113
ectodermal placode5.50e-1113
regional part of nervous system8.34e-1154
peripheral nervous system2.96e-1011
subdivision of head5.96e-0911
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