FFCP PHASE1:Mm9::chr16:38550224..38550250,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224143 | |EntrezGene=224143 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=399 | |MCL_coexpression_id=399 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BYB9,Q8BLG5 | |UniProt=Q8BYB9,Q8BLG5 | ||
|association_with_transcript=15bp_to_NM_172380,uc007zfc.1,uc007zfd.1_5end | |association_with_transcript=15bp_to_NM_172380,uc007zfc.1,uc007zfd.1_5end | ||
|cluster_id=chr16:38550224..38550250,- | |||
|description=CAGE_peak_2_at_Poglut1_5end | |description=CAGE_peak_2_at_Poglut1_5end | ||
|id=chr16:38550224..38550250,- | |id=chr16:38550224..38550250,- | ||
|ontology_enrichment_celltype=CL:0000540!5.89e-14!33;CL:0000047!5.89e-14!33;CL:0000031!5.89e-14!33;CL:0000404!5.89e-14!33;CL:0000393!4.19e-13!39;CL:0000211!4.19e-13!39;CL:0002319!1.13e-10!43;CL:0000221!1.29e-10!44;CL:0000133!1.29e-10!44;CL:0000117!3.47e-10!23;CL:0000337!3.47e-10!23;CL:0000055!3.77e-10!50 | |ontology_enrichment_celltype=CL:0000540!5.89e-14!33;CL:0000047!5.89e-14!33;CL:0000031!5.89e-14!33;CL:0000404!5.89e-14!33;CL:0000393!4.19e-13!39;CL:0000211!4.19e-13!39;CL:0002319!1.13e-10!43;CL:0000221!1.29e-10!44;CL:0000133!1.29e-10!44;CL:0000117!3.47e-10!23;CL:0000337!3.47e-10!23;CL:0000055!3.77e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.16e-15,33;CL:0000047,2.16e-15,33;CL:0000031,2.16e-15,33;CL:0000404,2.16e-15,33;CL:0000393,2.02e-14,39;CL:0000211,2.02e-14,39;CL:0000117,3.48e-11,23;CL:0000337,3.48e-11,23;CL:0002319,6.73e-11,43;CL:0000221,7.63e-11,44;CL:0000133,7.63e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.89e-27!73;UBERON:0005743!8.89e-27!73;UBERON:0000073!2.19e-26!75;UBERON:0001016!2.19e-26!75;UBERON:0002346!1.49e-22!71;UBERON:0003075!1.49e-22!71;UBERON:0007284!1.49e-22!71;UBERON:0004121!2.05e-22!102;UBERON:0000924!2.05e-22!102;UBERON:0006601!2.05e-22!102;UBERON:0000153!1.96e-21!94;UBERON:0001049!3.87e-21!52;UBERON:0005068!3.87e-21!52;UBERON:0006241!3.87e-21!52;UBERON:0007135!3.87e-21!52;UBERON:0000033!8.64e-21!63;UBERON:0000955!3.33e-20!50;UBERON:0006238!3.33e-20!50;UBERON:0002616!1.56e-19!49;UBERON:0007811!4.10e-18!86;UBERON:0003056!1.01e-17!49;UBERON:0003080!4.91e-16!40;UBERON:0002780!2.36e-15!39;UBERON:0001890!2.36e-15!39;UBERON:0006240!2.36e-15!39;UBERON:0002020!1.19e-14!34;UBERON:0002791!2.84e-12!29;UBERON:0003528!2.84e-12!29;UBERON:0001893!2.84e-12!29;UBERON:0000956!1.44e-08!21;UBERON:0001869!1.44e-08!21;UBERON:0000203!1.44e-08!21;UBERON:0002619!3.36e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!8.89e-27!73;UBERON:0005743!8.89e-27!73;UBERON:0000073!2.19e-26!75;UBERON:0001016!2.19e-26!75;UBERON:0002346!1.49e-22!71;UBERON:0003075!1.49e-22!71;UBERON:0007284!1.49e-22!71;UBERON:0004121!2.05e-22!102;UBERON:0000924!2.05e-22!102;UBERON:0006601!2.05e-22!102;UBERON:0000153!1.96e-21!94;UBERON:0001049!3.87e-21!52;UBERON:0005068!3.87e-21!52;UBERON:0006241!3.87e-21!52;UBERON:0007135!3.87e-21!52;UBERON:0000033!8.64e-21!63;UBERON:0000955!3.33e-20!50;UBERON:0006238!3.33e-20!50;UBERON:0002616!1.56e-19!49;UBERON:0007811!4.10e-18!86;UBERON:0003056!1.01e-17!49;UBERON:0003080!4.91e-16!40;UBERON:0002780!2.36e-15!39;UBERON:0001890!2.36e-15!39;UBERON:0006240!2.36e-15!39;UBERON:0002020!1.19e-14!34;UBERON:0002791!2.84e-12!29;UBERON:0003528!2.84e-12!29;UBERON:0001893!2.84e-12!29;UBERON:0000956!1.44e-08!21;UBERON:0001869!1.44e-08!21;UBERON:0000203!1.44e-08!21;UBERON:0002619!3.36e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.93e-29,73;UBERON:0001016,3.57e-28,75;UBERON:0002346,3.43e-26,64;UBERON:0003075,3.43e-26,64;UBERON:0007284,3.43e-26,64;UBERON:0000073,1.01e-23,54;UBERON:0004121,1.27e-23,95;UBERON:0000924,1.27e-23,95;UBERON:0006601,1.27e-23,95;UBERON:0001049,1.28e-22,52;UBERON:0005068,1.28e-22,52;UBERON:0006241,1.28e-22,52;UBERON:0007135,1.28e-22,52;UBERON:0010371,1.14e-20,73;UBERON:0000955,9.20e-20,47;UBERON:0006238,9.20e-20,47;UBERON:0002616,4.89e-19,46;UBERON:0003056,1.71e-18,49;UBERON:0003080,5.94e-17,40;UBERON:0002780,3.35e-16,39;UBERON:0001890,3.35e-16,39;UBERON:0006240,3.35e-16,39;UBERON:0002020,2.17e-15,34;UBERON:0010314,2.86e-14,92;UBERON:0003528,9.30e-13,29;UBERON:0002791,9.30e-13,29;UBERON:0001893,9.30e-13,29;UBERON:0000956,1.14e-08,21;UBERON:0001869,1.14e-08,21;UBERON:0000203,1.14e-08,21;UBERON:0002619,3.73e-07,17 | |||
|phase1_expression=1.76163731815273,0.697950815278722,0,0,0,0.503637815735669,1.63528848416868,0.516493293766305,3.37892933164,5.14941957908386,1.36974374580404,0.957265907944037,0.171200729931206,0.437102012094987,0.666219523631325,0.202475267389826,0,0.473193248037357,0.411343300817216,0,1.19060606211498,1.09220046320974,3.39559725880616,1.11994695955385,1.37645568640302,0.57423196411502,1.29228598847722,1.29282739611533,0,0,0.221730510655305,3.17515336729816,1.23012957516914,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,2.39203954153597,2.83855407414641,3.48738829107195,1.56478268869608,1.09012578190223,0.659058548203415,0.972149495371417,1.25987779462826,0,0.503347818173209,1.45072428402269,2.68875039313971,0.257259436035947,0.573066879877513,1.03134418455488,2.83243045203437,2.64495489636016,1.90149421051854,1.0165335962074,0,0,0,0,0.599200221036809,1.15265491596466,2.90330914463737,3.10513658162888,2.3135745748652,2.28520787523043,3.3130281142742,2.57230678351403,2.30029130443767,4.5960939330501,5.50579404996943,4.34136949489638,2.91852413186863,3.56092976871523,4.66586982372289,2.6045668527838,3.07101298901519,3.93933827022176,4.27835093775068,3.53554302568401,5.26775218956681,6.15118171223492,0.984440513331393,1.28471652181535,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,1.02258193546835,1.81850203222008,1.06001872353102,1.26759077799012,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,3.6251303710604,0.742210695324124,2.25530924795977,0.608930956624282,1.38369298353635,1.05505848386836,1.05829836422134,0.376999773989026,0.494389935468748,0.433798070759735,0,0.970601099684455,0.441683036920787,0.484875253135222,0,2.34224637609238,3.77004072264219,0.255457055208591,0.599075622529601,2.39961092397363,0.762421362438388,6.14141621559773,4.57500602818627,4.14659361972453,3.99795936442236,3.83573185995496,7.2725815595846,4.05603157669394,1.62942982160506,0.622034853050465,2.27450482590307,1.05220927943237,5.07469727554544,2.5289231487682,3.96136685571768,2.71268672104287,1.83698547708585,2.43416068541215,2.43624483855295,0.776110112217047,4.95806383745537,4.16033376369202,5.80638709741031,3.5071317188412,2.78047249225598,2.089512999133,1.02891068203972,1.59227413454795,1.40442637462647,0.257347907114715,0.852490498186778,1.44988040774851,0.938104239924385,1.08037236876609,0.473489471170421,0.787056926989615,0.462801338662135,0.232533944750408,1.3413670069981,0.467061369468678,0.329119699826961,0.656669856316381,0.162137619091711,0.292399974850665,0,0.268412837520744,5.67782861123144,5.65975368086064,0,0,3.19932375802851,3.0190767341857,1.03093969057675,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.648414149624083,0.995706366271836,1.70701110857774,1.71372768914593,2.25415471346161,1.01825663922657,1.93952487167626,0.98190147846446,0.569128834118316,0,0.31399745568275,0.616985819609003,0,0.333690211432188,1.37591296579242,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,2.65287976478679,2.44447464663039,2.20668611507745,0.704070744865506,0.167506257441816,1.19021820443007,0.780534591431195,0.945810864637146,0.664394068946325,0.159454768657487,0.327726629431476,0.863424909329478,0.578596234326046,0,0,0.983528546038072,0.827810238914197,7.06422595946285,5.15731421005694,3.27869890753351,0.252470927204373,4.10160685241134,3.12350995437311,4.73931475012158,3.34556317133573,2.67358408898873,2.26461224631066,5.66734982344852,3.79932615284705,2.37172666767914,5.46246237917072,0.851640511249612,1.95872164033981,1.79175655288934,0.329940245945071,0,2.18502572539483,0.302323556964751,1.50884063804718,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0,0,1.05418608574999,0,1.02131881726136,2.88097750450096,3.10460841078611,2.7863814554107,3.19212420556092,2.31879462882692,3.1264313914403,2.13125464380219,0.704015124191131,1.0591603543191,0.441056796109924,0.16488625294148,0.807322133479528,0.603129249281559,0.596861720015682,0.820704498725306,0,5.56275906031529,0.341741761595705,0.619160603889667,0.740778109478847,0.753473828018764,0.546776910884101,1.83022538565218,0.509935289981566,0.559805809294632,1.24379976423981,0,4.58687190692646,2.03319467126849,1.29606408986162,1.25452977608681,0.87345025498471,0.539457385539283,0.661227645802687,0.523511883968059,0.129614973291793,1.24267862617385,0,1.64468200648377,1.98550188548517,2.13896307178452,2.84151611651008,0.844780627453891,1.40828686374905,1.5624526181274,2.09718688851422,0.483168241652012,0.576060012515731,1.58005560314089,1.82452693761148,1.84879722896689,2.33857481360031,1.25318686967237,1.19208812868759,1.20195449519969,1.47689527174577,1.31256384932592,0.838274873204998,0.806609481094724,1.07203668813728,1.34696578296461,1.40252282617883,0,1.10992976687032,1.25599399253266,1.51096154727671,0.579568782096571,0.750729901804728,1.46521299413812,0.643105137237198,1.00314420807073,6.7770221114048,5.06357760157895,5.72895513439397,3.60891682921744,3.42541259885321,1.5107877947794,3.37511250115903,4.95353323546643,4.98456649882625,3.62432218226274,4.56664329370377,1.99512436700516,3.41467211508268,1.45864030240976,1.46729213839588,0.735374033800057,0.222246727801615,0.618105171716683,1.28367683836726,0.505394423527595,2.5347929989024,2.82939512079114,1.591905626988,1.21647789569252,1.32101578597911,0.952587382566147,0.695305955669133,0.77163688185482,1.64834360321323,1.61918812147837,1.02860775715625,0.70990322463735,1.1921809497366,1.30811774969096,1.78807822789128,1.77690676572521,1.46342378298218,1.57841826862706,0.679020569229309,1.12228454331548,1.42362021749009,0.689531376628944,1.22769312950907,0.77468420592983,1.73615949883027,3.49734809113124,1.40358965067245,1.07435527024149,1.14772999241306,0.882365676478062,0.463735671240843 | |phase1_expression=1.76163731815273,0.697950815278722,0,0,0,0.503637815735669,1.63528848416868,0.516493293766305,3.37892933164,5.14941957908386,1.36974374580404,0.957265907944037,0.171200729931206,0.437102012094987,0.666219523631325,0.202475267389826,0,0.473193248037357,0.411343300817216,0,1.19060606211498,1.09220046320974,3.39559725880616,1.11994695955385,1.37645568640302,0.57423196411502,1.29228598847722,1.29282739611533,0,0,0.221730510655305,3.17515336729816,1.23012957516914,0,0.288851619751275,0,0,0.418531630736908,0,0,0,0,0,2.39203954153597,2.83855407414641,3.48738829107195,1.56478268869608,1.09012578190223,0.659058548203415,0.972149495371417,1.25987779462826,0,0.503347818173209,1.45072428402269,2.68875039313971,0.257259436035947,0.573066879877513,1.03134418455488,2.83243045203437,2.64495489636016,1.90149421051854,1.0165335962074,0,0,0,0,0.599200221036809,1.15265491596466,2.90330914463737,3.10513658162888,2.3135745748652,2.28520787523043,3.3130281142742,2.57230678351403,2.30029130443767,4.5960939330501,5.50579404996943,4.34136949489638,2.91852413186863,3.56092976871523,4.66586982372289,2.6045668527838,3.07101298901519,3.93933827022176,4.27835093775068,3.53554302568401,5.26775218956681,6.15118171223492,0.984440513331393,1.28471652181535,0.289864488701678,0.860423876981386,0,0,0,0,0.280888840263504,1.02258193546835,1.81850203222008,1.06001872353102,1.26759077799012,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,3.6251303710604,0.742210695324124,2.25530924795977,0.608930956624282,1.38369298353635,1.05505848386836,1.05829836422134,0.376999773989026,0.494389935468748,0.433798070759735,0,0.970601099684455,0.441683036920787,0.484875253135222,0,2.34224637609238,3.77004072264219,0.255457055208591,0.599075622529601,2.39961092397363,0.762421362438388,6.14141621559773,4.57500602818627,4.14659361972453,3.99795936442236,3.83573185995496,7.2725815595846,4.05603157669394,1.62942982160506,0.622034853050465,2.27450482590307,1.05220927943237,5.07469727554544,2.5289231487682,3.96136685571768,2.71268672104287,1.83698547708585,2.43416068541215,2.43624483855295,0.776110112217047,4.95806383745537,4.16033376369202,5.80638709741031,3.5071317188412,2.78047249225598,2.089512999133,1.02891068203972,1.59227413454795,1.40442637462647,0.257347907114715,0.852490498186778,1.44988040774851,0.938104239924385,1.08037236876609,0.473489471170421,0.787056926989615,0.462801338662135,0.232533944750408,1.3413670069981,0.467061369468678,0.329119699826961,0.656669856316381,0.162137619091711,0.292399974850665,0,0.268412837520744,5.67782861123144,5.65975368086064,0,0,3.19932375802851,3.0190767341857,1.03093969057675,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.648414149624083,0.995706366271836,1.70701110857774,1.71372768914593,2.25415471346161,1.01825663922657,1.93952487167626,0.98190147846446,0.569128834118316,0,0.31399745568275,0.616985819609003,0,0.333690211432188,1.37591296579242,0.224862112384854,0,0,0.50925170356284,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,2.65287976478679,2.44447464663039,2.20668611507745,0.704070744865506,0.167506257441816,1.19021820443007,0.780534591431195,0.945810864637146,0.664394068946325,0.159454768657487,0.327726629431476,0.863424909329478,0.578596234326046,0,0,0.983528546038072,0.827810238914197,7.06422595946285,5.15731421005694,3.27869890753351,0.252470927204373,4.10160685241134,3.12350995437311,4.73931475012158,3.34556317133573,2.67358408898873,2.26461224631066,5.66734982344852,3.79932615284705,2.37172666767914,5.46246237917072,0.851640511249612,1.95872164033981,1.79175655288934,0.329940245945071,0,2.18502572539483,0.302323556964751,1.50884063804718,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0,0,1.05418608574999,0,1.02131881726136,2.88097750450096,3.10460841078611,2.7863814554107,3.19212420556092,2.31879462882692,3.1264313914403,2.13125464380219,0.704015124191131,1.0591603543191,0.441056796109924,0.16488625294148,0.807322133479528,0.603129249281559,0.596861720015682,0.820704498725306,0,5.56275906031529,0.341741761595705,0.619160603889667,0.740778109478847,0.753473828018764,0.546776910884101,1.83022538565218,0.509935289981566,0.559805809294632,1.24379976423981,0,4.58687190692646,2.03319467126849,1.29606408986162,1.25452977608681,0.87345025498471,0.539457385539283,0.661227645802687,0.523511883968059,0.129614973291793,1.24267862617385,0,1.64468200648377,1.98550188548517,2.13896307178452,2.84151611651008,0.844780627453891,1.40828686374905,1.5624526181274,2.09718688851422,0.483168241652012,0.576060012515731,1.58005560314089,1.82452693761148,1.84879722896689,2.33857481360031,1.25318686967237,1.19208812868759,1.20195449519969,1.47689527174577,1.31256384932592,0.838274873204998,0.806609481094724,1.07203668813728,1.34696578296461,1.40252282617883,0,1.10992976687032,1.25599399253266,1.51096154727671,0.579568782096571,0.750729901804728,1.46521299413812,0.643105137237198,1.00314420807073,6.7770221114048,5.06357760157895,5.72895513439397,3.60891682921744,3.42541259885321,1.5107877947794,3.37511250115903,4.95353323546643,4.98456649882625,3.62432218226274,4.56664329370377,1.99512436700516,3.41467211508268,1.45864030240976,1.46729213839588,0.735374033800057,0.222246727801615,0.618105171716683,1.28367683836726,0.505394423527595,2.5347929989024,2.82939512079114,1.591905626988,1.21647789569252,1.32101578597911,0.952587382566147,0.695305955669133,0.77163688185482,1.64834360321323,1.61918812147837,1.02860775715625,0.70990322463735,1.1921809497366,1.30811774969096,1.78807822789128,1.77690676572521,1.46342378298218,1.57841826862706,0.679020569229309,1.12228454331548,1.42362021749009,0.689531376628944,1.22769312950907,0.77468420592983,1.73615949883027,3.49734809113124,1.40358965067245,1.07435527024149,1.14772999241306,0.882365676478062,0.463735671240843 | ||
|short_description=p2@Poglut1 | |short_description=p2@Poglut1 | ||
}} | }} |
Latest revision as of 00:00, 2 October 2015
Short description: | p2@Poglut1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Poglut1_5end |
Coexpression cluster: | MCL_coexpression_mm9:399 |
Association with transcript: | 15bp_to_NM_172380, uc007zfc.1, uc007zfd.1_5end |
EntrezGene: | Poglut1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.16e-15 | 33 |
neuronal stem cell | 2.16e-15 | 33 |
neuroblast | 2.16e-15 | 33 |
electrically signaling cell | 2.16e-15 | 33 |
electrically responsive cell | 2.02e-14 | 39 |
electrically active cell | 2.02e-14 | 39 |
CNS neuron (sensu Vertebrata) | 3.48e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.48e-11 | 23 |
neural cell | 6.73e-11 | 43 |
ectodermal cell | 7.63e-11 | 44 |
neurectodermal cell | 7.63e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.93e-29 | 73 |
nervous system | 3.57e-28 | 75 |
neurectoderm | 3.43e-26 | 64 |
neural plate | 3.43e-26 | 64 |
presumptive neural plate | 3.43e-26 | 64 |
regional part of nervous system | 1.01e-23 | 54 |
ectoderm-derived structure | 1.27e-23 | 95 |
ectoderm | 1.27e-23 | 95 |
presumptive ectoderm | 1.27e-23 | 95 |
neural tube | 1.28e-22 | 52 |
neural rod | 1.28e-22 | 52 |
future spinal cord | 1.28e-22 | 52 |
neural keel | 1.28e-22 | 52 |
ecto-epithelium | 1.14e-20 | 73 |
brain | 9.20e-20 | 47 |
future brain | 9.20e-20 | 47 |
regional part of brain | 4.89e-19 | 46 |
pre-chordal neural plate | 1.71e-18 | 49 |
anterior neural tube | 5.94e-17 | 40 |
regional part of forebrain | 3.35e-16 | 39 |
forebrain | 3.35e-16 | 39 |
future forebrain | 3.35e-16 | 39 |
gray matter | 2.17e-15 | 34 |
structure with developmental contribution from neural crest | 2.86e-14 | 92 |
brain grey matter | 9.30e-13 | 29 |
regional part of telencephalon | 9.30e-13 | 29 |
telencephalon | 9.30e-13 | 29 |
cerebral cortex | 1.14e-08 | 21 |
cerebral hemisphere | 1.14e-08 | 21 |
pallium | 1.14e-08 | 21 |
regional part of cerebral cortex | 3.73e-07 | 17 |