FFCP PHASE1:Mm9::chr4:151792907..151792919,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16498 | |EntrezGene=16498 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |MCL_coexpression_id=16 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-391bp_to_ENSMUST00000161844_5end | |association_with_transcript=-391bp_to_ENSMUST00000161844_5end | ||
|cluster_id=chr4:151792907..151792919,- | |||
|description=CAGE_peak_10_at_Kcnab2_5end | |description=CAGE_peak_10_at_Kcnab2_5end | ||
|id=chr4:151792907..151792919,- | |id=chr4:151792907..151792919,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.14e-07,2;CL:0000328,1.14e-07,2;CL:0002573,1.14e-07,2;CL:0002376,1.14e-07,2;CL:0000218,1.14e-07,2;CL:0000692,1.14e-07,2;CL:0002377,1.14e-07,2;CL:0002375,1.14e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!2.88e-13!12;UBERON:0001032!2.88e-13!12;UBERON:0004456!2.88e-13!12;UBERON:0004121!6.56e-13!102;UBERON:0000924!6.56e-13!102;UBERON:0006601!6.56e-13!102;UBERON:0005085!4.68e-12!13;UBERON:0000970!5.68e-12!9;UBERON:0000019!5.68e-12!9;UBERON:0000047!5.68e-12!9;UBERON:0004088!5.68e-12!9;UBERON:0002104!5.68e-12!9;UBERON:0001456!5.68e-12!9;UBERON:0003072!5.68e-12!9;UBERON:0003071!5.68e-12!9;UBERON:0004128!5.68e-12!9;UBERON:0000033!1.51e-10!63;UBERON:0002346!1.70e-10!71;UBERON:0003075!1.70e-10!71;UBERON:0007284!1.70e-10!71;UBERON:0002298!6.59e-10!6;UBERON:0001444!1.77e-09!11;UBERON:0003056!7.04e-08!49;UBERON:0002950!1.59e-07!4;UBERON:0001891!1.59e-07!4;UBERON:0009616!1.59e-07!4;UBERON:0000073!6.28e-07!75;UBERON:0001016!6.28e-07!75 | |ontology_enrichment_uberon=UBERON:0000020!2.88e-13!12;UBERON:0001032!2.88e-13!12;UBERON:0004456!2.88e-13!12;UBERON:0004121!6.56e-13!102;UBERON:0000924!6.56e-13!102;UBERON:0006601!6.56e-13!102;UBERON:0005085!4.68e-12!13;UBERON:0000970!5.68e-12!9;UBERON:0000019!5.68e-12!9;UBERON:0000047!5.68e-12!9;UBERON:0004088!5.68e-12!9;UBERON:0002104!5.68e-12!9;UBERON:0001456!5.68e-12!9;UBERON:0003072!5.68e-12!9;UBERON:0003071!5.68e-12!9;UBERON:0004128!5.68e-12!9;UBERON:0000033!1.51e-10!63;UBERON:0002346!1.70e-10!71;UBERON:0003075!1.70e-10!71;UBERON:0007284!1.70e-10!71;UBERON:0002298!6.59e-10!6;UBERON:0001444!1.77e-09!11;UBERON:0003056!7.04e-08!49;UBERON:0002950!1.59e-07!4;UBERON:0001891!1.59e-07!4;UBERON:0009616!1.59e-07!4;UBERON:0000073!6.28e-07!75;UBERON:0001016!6.28e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.44e-22,9;UBERON:0000019,1.44e-22,9;UBERON:0000047,1.44e-22,9;UBERON:0010312,1.44e-22,9;UBERON:0004088,1.44e-22,9;UBERON:0002104,1.44e-22,9;UBERON:0001456,1.44e-22,9;UBERON:0003072,1.44e-22,9;UBERON:0004128,1.44e-22,9;UBERON:0003071,1.44e-22,9;UBERON:0001444,1.41e-18,11;UBERON:0000020,4.43e-17,12;UBERON:0001032,4.43e-17,12;UBERON:0004456,4.43e-17,12;UBERON:0000033,8.25e-16,13;UBERON:0005085,8.25e-16,13;UBERON:0002346,3.38e-07,64;UBERON:0003075,3.38e-07,64;UBERON:0007284,3.38e-07,64 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,1.22238598221448,0,0,0.186399445825301,0.37863096666592,1.5870027622425,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0,0.162241263067758,0,0,0,1.26265113531884,0.130120442962704,0.229902104433473,0.360124259610698,0,0.680364991513279,1.40925092313335,1.12442069471675,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0.163934945376675,0,0,0.780877488593277,1.50796378412959,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0,0.49465875882444,0,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,1.22238598221448,0,0,0.186399445825301,0.37863096666592,1.5870027622425,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0,0.162241263067758,0,0,0,1.26265113531884,0.130120442962704,0.229902104433473,0.360124259610698,0,0.680364991513279,1.40925092313335,1.12442069471675,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0.163934945376675,0,0,0.780877488593277,1.50796378412959,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0,0,0.49465875882444,0,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0 | ||
|short_description=p10@Kcnab2 | |short_description=p10@Kcnab2 | ||
}} | }} |
Latest revision as of 19:08, 26 September 2015
Short description: | p10@Kcnab2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Kcnab2_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -391bp_to_ENSMUST00000161844_5end |
EntrezGene: | Kcnab2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.14e-07 | 2 |
myelin accumulating cell | 1.14e-07 | 2 |
Schwann cell | 1.14e-07 | 2 |
non-myelinating Schwann cell | 1.14e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 1.14e-07 | 2 |
terminal Schwann cell | 1.14e-07 | 2 |
immature Schwann cell | 1.14e-07 | 2 |
Schwann cell precursor | 1.14e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
eye | 1.44e-22 | 9 |
camera-type eye | 1.44e-22 | 9 |
simple eye | 1.44e-22 | 9 |
immature eye | 1.44e-22 | 9 |
ocular region | 1.44e-22 | 9 |
visual system | 1.44e-22 | 9 |
face | 1.44e-22 | 9 |
optic cup | 1.44e-22 | 9 |
optic vesicle | 1.44e-22 | 9 |
eye primordium | 1.44e-22 | 9 |
subdivision of head | 1.41e-18 | 11 |
sense organ | 4.43e-17 | 12 |
sensory system | 4.43e-17 | 12 |
entire sense organ system | 4.43e-17 | 12 |
head | 8.25e-16 | 13 |
ectodermal placode | 8.25e-16 | 13 |
neurectoderm | 3.38e-07 | 64 |
neural plate | 3.38e-07 | 64 |
presumptive neural plate | 3.38e-07 | 64 |