FFCP PHASE1:Hg19::chr2:216995311..216995323,+: Difference between revisions
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|id=chr2:216995311..216995323,+
|short_description=p27@XRCC5
|description=CAGE_peak_27_at_XRCC5_5end
|association_with_transcript=-109bp_to_ENST00000471649_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7520 | |EntrezGene=7520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12833 | |HGNC=12833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_ENST00000471649_5end | |||
|cluster_id=chr2:216995311..216995323,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_27_at_XRCC5_5end | |||
|id=chr2:216995311..216995323,+ | |||
|ontology_enrichment_celltype=CL:0002195!6.94e-16!2;CL:0002571!6.94e-16!2 | |||
|ontology_enrichment_celltype_v019=CL:0002195;1.09e-49;2!CL:0002571;1.09e-49;2!CL:0000182;3.14e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.09e-49,2;CL:0002571,1.09e-49,2;CL:0000182,3.01e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.23e-13!19;UBERON:0006925!1.23e-13!19;UBERON:0008836!1.23e-13!19;UBERON:0005057!3.48e-13!26;UBERON:0002368!1.93e-12!35;UBERON:0008835!1.05e-11!22;UBERON:0003894!1.05e-11!22;UBERON:0009854!3.59e-11!23;UBERON:0007499!3.11e-10!25;UBERON:0009497!3.11e-10!25;UBERON:0000015!3.11e-10!25;UBERON:0002423!3.11e-10!25;UBERON:0006235!3.11e-10!25;UBERON:0004161!3.11e-10!25;UBERON:0009856!8.08e-10!26;UBERON:0009663!1.21e-09!7;UBERON:0004921!1.49e-09!129;UBERON:0004185!1.49e-09!129;UBERON:0000949!2.01e-09!45;UBERON:0007023!2.26e-09!115;UBERON:0001007!1.08e-08!155;UBERON:0001555!1.08e-08!155;UBERON:0007026!1.08e-08!155;UBERON:0002146!1.48e-08!1;UBERON:0005623!1.48e-08!1;UBERON:0002365!3.81e-08!31;UBERON:0002330!3.81e-08!31;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1;UBERON:0000369!7.72e-08!4;UBERON:0002435!7.72e-08!4;UBERON:0000204!7.72e-08!4;UBERON:0010082!7.72e-08!4;UBERON:0004119!1.00e-07!169;UBERON:0000925!1.00e-07!169;UBERON:0006595!1.00e-07!169;UBERON:0002308!1.32e-07!9;UBERON:0002420!1.32e-07!9;UBERON:0000125!1.32e-07!9;UBERON:0007245!1.32e-07!9;UBERON:0010009!1.32e-07!9;UBERON:0010011!1.32e-07!9;UBERON:0000454!1.32e-07!9;UBERON:0005177!1.58e-07!107;UBERON:0001041!5.08e-07!98;UBERON:0002530!6.45e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.41e-32;19!UBERON:0006925;1.41e-32;19!UBERON:0002423;7.24e-25;25!UBERON:0002368;1.88e-24;33!UBERON:0002365;4.49e-20;31!UBERON:0002330;4.49e-20;31!UBERON:0000949;2.35e-17;43!UBERON:0000007;1.29e-13;2!UBERON:0002530;3.33e-12;57!UBERON:0005172;3.08e-11;52!UBERON:0005173;3.08e-11;52!UBERON:0003296;1.86e-07;4!UBERON:0010133;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.28e-32,19;UBERON:0006925,1.28e-32,19;UBERON:0008836,1.28e-32,19;UBERON:0008835,3.10e-28,22;UBERON:0003894,3.10e-28,22;UBERON:0009854,5.01e-27,23;UBERON:0002368,2.10e-25,35;UBERON:0007499,6.72e-25,25;UBERON:0009497,6.72e-25,25;UBERON:0000015,6.72e-25,25;UBERON:0002423,6.72e-25,25;UBERON:0006235,6.72e-25,25;UBERON:0004161,6.72e-25,25;UBERON:0009856,5.87e-24,26;UBERON:0002365,3.71e-20,31;UBERON:0002330,3.71e-20,31;UBERON:0000949,8.15e-20,45;UBERON:0002530,3.69e-15,59;UBERON:0000007,1.55e-13,2;UBERON:0003929,1.06e-11,54;UBERON:0005172,1.06e-11,54;UBERON:0005173,1.06e-11,54;UBERON:0002417,1.48e-10,60;UBERON:0000916,1.48e-10,60;UBERON:0005911,8.95e-08,82;UBERON:0003296,2.04e-07,4;UBERON:0010133,2.04e-07,4;UBERON:0001041,2.46e-07,87 | |||
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|short_description=p27@XRCC5 | |||
}} | }} |
Latest revision as of 05:56, 20 September 2015
Short description: | p27@XRCC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_XRCC5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -109bp_to_ENST00000471649_5end |
EntrezGene: | XRCC5 |
HGNC: | 12833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.09e-49 | 2 |
hepatic mesenchymal stem cell | 1.09e-49 | 2 |
hepatocyte | 3.01e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.28e-32 | 19 |
digestive gland | 1.28e-32 | 19 |
liver bud | 1.28e-32 | 19 |
hepatic diverticulum | 3.10e-28 | 22 |
liver primordium | 3.10e-28 | 22 |
digestive tract diverticulum | 5.01e-27 | 23 |
endocrine gland | 2.10e-25 | 35 |
epithelial sac | 6.72e-25 | 25 |
epithelium of foregut-midgut junction | 6.72e-25 | 25 |
anatomical boundary | 6.72e-25 | 25 |
hepatobiliary system | 6.72e-25 | 25 |
foregut-midgut junction | 6.72e-25 | 25 |
septum transversum | 6.72e-25 | 25 |
sac | 5.87e-24 | 26 |
exocrine gland | 3.71e-20 | 31 |
exocrine system | 3.71e-20 | 31 |
endocrine system | 8.15e-20 | 45 |
gland | 3.69e-15 | 59 |
pituitary gland | 1.55e-13 | 2 |
gut epithelium | 1.06e-11 | 54 |
abdomen element | 1.06e-11 | 54 |
abdominal segment element | 1.06e-11 | 54 |
abdominal segment of trunk | 1.48e-10 | 60 |
abdomen | 1.48e-10 | 60 |
endo-epithelium | 8.95e-08 | 82 |
gland of diencephalon | 2.04e-07 | 4 |
neuroendocrine gland | 2.04e-07 | 4 |
foregut | 2.46e-07 | 87 |