FFCP PHASE1:Mm9::chr2:157249991..157250058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20779 | |EntrezGene=20779 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=Q80XU2,P05480 | |UniProt=Q80XU2,P05480 | ||
|association_with_transcript=0bp_to_ENSMUST00000029175,ENSMUST00000092576,NM_001025395,NM_009271,uc008npa.1,uc008npb.1,uc012cia.1_5end | |association_with_transcript=0bp_to_ENSMUST00000029175,ENSMUST00000092576,NM_001025395,NM_009271,uc008npa.1,uc008npb.1,uc012cia.1_5end | ||
|cluster_id=chr2:157249991..157250058,+ | |||
|description=CAGE_peak_1_at_Src_5end | |description=CAGE_peak_1_at_Src_5end | ||
|id=chr2:157249991..157250058,+ | |id=chr2:157249991..157250058,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.65e-11!70;CL:0000220!1.65e-11!70;CL:0000221!4.54e-11!44;CL:0000133!4.54e-11!44;CL:0002319!4.56e-11!43;CL:0000540!6.91e-11!33;CL:0000047!6.91e-11!33;CL:0000031!6.91e-11!33;CL:0000404!6.91e-11!33;CL:0000055!9.23e-09!50;CL:0000393!9.68e-09!39;CL:0000211!9.68e-09!39;CL:0000117!6.21e-08!23;CL:0000337!6.21e-08!23 | |ontology_enrichment_celltype=CL:0002321!1.65e-11!70;CL:0000220!1.65e-11!70;CL:0000221!4.54e-11!44;CL:0000133!4.54e-11!44;CL:0002319!4.56e-11!43;CL:0000540!6.91e-11!33;CL:0000047!6.91e-11!33;CL:0000031!6.91e-11!33;CL:0000404!6.91e-11!33;CL:0000055!9.23e-09!50;CL:0000393!9.68e-09!39;CL:0000211!9.68e-09!39;CL:0000117!6.21e-08!23;CL:0000337!6.21e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.72e-11,70;CL:0000221,4.50e-11,44;CL:0000133,4.50e-11,44;CL:0002319,4.52e-11,43;CL:0000540,6.86e-11,33;CL:0000047,6.86e-11,33;CL:0000031,6.86e-11,33;CL:0000404,6.86e-11,33;CL:0000393,9.63e-09,39;CL:0000211,9.63e-09,39;CL:0000117,6.17e-08,23;CL:0000337,6.17e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.82e-16!73;UBERON:0005743!3.82e-16!73;UBERON:0000073!1.47e-15!75;UBERON:0001016!1.47e-15!75;UBERON:0004121!1.34e-13!102;UBERON:0000924!1.34e-13!102;UBERON:0006601!1.34e-13!102;UBERON:0000160!4.32e-12!43;UBERON:0000955!2.53e-10!50;UBERON:0006238!2.53e-10!50;UBERON:0002616!3.20e-10!49;UBERON:0001049!3.74e-10!52;UBERON:0005068!3.74e-10!52;UBERON:0006241!3.74e-10!52;UBERON:0007135!3.74e-10!52;UBERON:0000033!4.59e-10!63;UBERON:0005409!1.48e-09!59;UBERON:0003080!1.71e-09!40;UBERON:0002780!2.20e-09!39;UBERON:0001890!2.20e-09!39;UBERON:0006240!2.20e-09!39;UBERON:0003056!3.38e-09!49;UBERON:0002020!3.51e-09!34;UBERON:0000344!6.90e-09!15;UBERON:0002346!1.53e-08!71;UBERON:0003075!1.53e-08!71;UBERON:0007284!1.53e-08!71;UBERON:0002791!3.56e-08!29;UBERON:0003528!3.56e-08!29;UBERON:0001893!3.56e-08!29;UBERON:0001242!1.04e-07!13;UBERON:0000060!1.04e-07!13;UBERON:0001262!1.04e-07!13;UBERON:0004786!1.04e-07!13;UBERON:0002050!5.12e-07!317;UBERON:0005423!5.12e-07!317 | |ontology_enrichment_uberon=UBERON:0001017!3.82e-16!73;UBERON:0005743!3.82e-16!73;UBERON:0000073!1.47e-15!75;UBERON:0001016!1.47e-15!75;UBERON:0004121!1.34e-13!102;UBERON:0000924!1.34e-13!102;UBERON:0006601!1.34e-13!102;UBERON:0000160!4.32e-12!43;UBERON:0000955!2.53e-10!50;UBERON:0006238!2.53e-10!50;UBERON:0002616!3.20e-10!49;UBERON:0001049!3.74e-10!52;UBERON:0005068!3.74e-10!52;UBERON:0006241!3.74e-10!52;UBERON:0007135!3.74e-10!52;UBERON:0000033!4.59e-10!63;UBERON:0005409!1.48e-09!59;UBERON:0003080!1.71e-09!40;UBERON:0002780!2.20e-09!39;UBERON:0001890!2.20e-09!39;UBERON:0006240!2.20e-09!39;UBERON:0003056!3.38e-09!49;UBERON:0002020!3.51e-09!34;UBERON:0000344!6.90e-09!15;UBERON:0002346!1.53e-08!71;UBERON:0003075!1.53e-08!71;UBERON:0007284!1.53e-08!71;UBERON:0002791!3.56e-08!29;UBERON:0003528!3.56e-08!29;UBERON:0001893!3.56e-08!29;UBERON:0001242!1.04e-07!13;UBERON:0000060!1.04e-07!13;UBERON:0001262!1.04e-07!13;UBERON:0004786!1.04e-07!13;UBERON:0002050!5.12e-07!317;UBERON:0005423!5.12e-07!317 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.61e-16,95;UBERON:0000924,2.61e-16,95;UBERON:0006601,2.61e-16,95;UBERON:0001017,3.77e-16,73;UBERON:0001016,1.45e-15,75;UBERON:0000160,1.18e-13,31;UBERON:0011216,1.12e-11,194;UBERON:0000073,2.54e-11,54;UBERON:0010371,2.94e-11,73;UBERON:0002346,4.27e-11,64;UBERON:0003075,4.27e-11,64;UBERON:0007284,4.27e-11,64;UBERON:0001049,3.71e-10,52;UBERON:0005068,3.71e-10,52;UBERON:0006241,3.71e-10,52;UBERON:0007135,3.71e-10,52;UBERON:0005409,7.20e-10,47;UBERON:0000955,1.58e-09,47;UBERON:0006238,1.58e-09,47;UBERON:0003080,1.70e-09,40;UBERON:0002616,1.99e-09,46;UBERON:0002780,2.19e-09,39;UBERON:0001890,2.19e-09,39;UBERON:0006240,2.19e-09,39;UBERON:0003056,3.35e-09,49;UBERON:0002020,3.49e-09,34;UBERON:0000344,6.86e-09,15;UBERON:0003528,3.54e-08,29;UBERON:0002791,3.54e-08,29;UBERON:0001893,3.54e-08,29;UBERON:0001242,1.03e-07,13;UBERON:0001262,1.03e-07,13;UBERON:0004786,1.03e-07,13 | |||
|phase1_expression=16.1750335575842,326.292006142803,358.994399878344,193.577095236371,268.480111251242,112.81487072479,88.0719655045132,5.16493293766305,0.422366166455,0.468129052643987,0,0.239316476986009,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0.315462165358238,0.548457734422955,0,17.093701320365,0.794327609607082,0,65.1169160769165,66.2992822284121,256.681687959414,178.766228406016,157.724942326071,90.0711008223212,69.308285683981,74.2797210695271,4.44521471421742,1.23012957516914,0,24.2635360591071,19.7819227976606,23.4794759701724,0,0,0,0,0.683045484958446,0.485510353031154,9.9458486200706,13.990016508293,9.72797786456912,25.0365230191373,18.532138292338,28.3395175727469,21.5817187972455,14.4186014274123,18.6878333674463,0.167782606057736,1.45072428402269,0.336093799142464,14.406528418013,13.7536051170603,18.5641953219879,41.4748744762175,32.268449735594,32.9592329823213,24.7356508410466,16.0073063300005,30.5965903875676,33.6214563272771,39.7868864369816,38.3488141463558,49.9483796918021,33.0769863264044,39.691745869517,42.6959671543305,25.4229376119385,28.2711732418065,34.4199145794021,37.5714246391487,39.5264078242309,25.3266526298594,36.6462660304489,28.417208652405,49.4573578988227,47.4820870296506,36.98484930953,21.217907924105,23.6360296213306,25.9757021220577,23.2756582524197,25.1997875014412,34.6702969235059,7.87552410665114,18.1371744256285,15.6526823898906,7.74381489283248,13.599426674155,2.15881276655127,0,0.896053774194671,13.9039975930434,12.1005529030421,15.5871602761721,12.7202246823722,19.858922188512,14.115912515575,22.9324715735981,14.2213340630666,50.0094304735905,51.432052691445,65.7181778519218,16.0999270403875,5.43769555659061,7.12522267511159,13.5318554877586,11.5696881758614,8.76338889573022,9.94769427647309,12.1116368349776,7.28866229712118,44.7422891599217,5.63937491987655,14.153768831198,8.8971767471075,8.83366073841574,9.69750506270444,50.325775528893,16.6885054296582,23.0391377494801,64.8860920229822,2.27648736561249,1.19980546198682,1.90605340609597,23.2175491077475,17.8425235099264,30.4083532113132,29.550134432687,37.8458876848889,27.8435979709811,32.2860113504838,13.0354385728405,13.9335807083304,15.4160882644542,16.2040229032585,15.4843327125617,14.4838325793088,15.48534316326,18.0845781402858,27.2145996605311,26.2633126583942,32.9830070450246,12.6764651662118,20.6945273215529,20.6125627382923,22.6976950171494,13.8093311429372,19.7413546950174,17.7608604926305,17.9030458674911,17.9130840136644,0,0,0,8.90640821902658,10.3191466391682,7.38254451990161,9.46978942340841,7.67380503814875,5.55361606394562,6.97601834251224,5.633741429392,7.00592054203017,5.9241545968853,1.97000956894914,4.13450928683864,4.5321996101853,3.07370161407471,4.56301823785264,38.6933505357994,27.2697222805104,140.427982768114,61.3525314659423,17.4896365438892,16.0243303583703,15.0774929746849,20.1683524623343,24.016828735246,32.5285820652476,78.7718242163889,50.7272780549954,53.0317290568569,45.1631191533412,52.6403035221624,70.1079138750293,52.7376841694254,74.279694923879,14.9837641752935,13.1385789501188,11.270773567308,16.2921062276251,12.0250542043928,18.2353131714828,16.5679727265554,11.513591542409,12.2459007716272,15.5480426541469,0.889357881261447,6.00642380577939,5.50365186316968,2.47348323623339,4.86864291332407,4.10001171579109,4.07401362850272,7.76779571117189,5.18832725680113,3.84385978463314,11.5014565221884,11.5363693777236,9.98520553966594,7.07220858251913,5.20252499213545,3.37710464954357,22.5398892003258,12.127450353311,18.0891123850649,17.8232340063948,19.2446003596572,24.6234198439469,24.5184950112594,44.6856053594359,27.5861502185834,28.568944964692,34.2827752613597,29.3315333341171,28.6657069897387,29.5084079506284,25.6345182696763,28.8270012423916,55.0775985781321,39.7348914678815,13.9679013289379,20.3948334670434,12.4590558486273,3.02965112645248,34.0748876969557,34.7490482424008,34.252320239515,37.7570700765032,47.2333189054675,44.4430153338467,31.1704240289669,33.3171678018896,24.5078422326845,22.8138134659483,13.3423680095772,18.16269157406,17.4289046508326,20.4562952485944,26.5490276679926,16.5090832585387,15.1161778482376,11.5049098651098,14.4697927511579,16.908933136916,36.179961043551,21.8120237686503,16.3988794056972,18.0140952023415,18.9753495434998,18.5643977846736,17.0219802876894,20.3469036255381,30.011214637599,28.7211626942334,19.8621061679346,26.5769538227085,18.7585883486418,22.8348711835949,35.4354279176203,52.5343535742274,22.2733682035512,15.1695352706162,12.2712964288888,13.6910339586914,16.4733834724328,19.3686261699172,58.8791289992298,12.4234952347041,3.07567585436135,13.6215332855727,6.2966139305702,3.20226376907975,3.2806614653046,2.28778173206523,10.1987057996313,8.95689294871411,10.9177979305495,27.6854479224383,16.2913036694285,15.0456405673868,16.6328224865574,18.3997700492732,22.4913440658563,27.107733623349,32.234847732881,31.6724689800676,57.9378930614314,22.3682152711293,1.12738587736838,16.2973035187937,13.0712207461107,13.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| ||
|short_description=p1@Src | |short_description=p1@Src | ||
}} | }} |
Latest revision as of 00:43, 26 September 2015
Short description: | p1@Src |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Src_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000029175, ENSMUST00000092576, NM_001025395, NM_009271, uc008npa.1, uc008npb.1, uc012cia.1_5end |
EntrezGene: | Src |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.72e-11 | 70 |
ectodermal cell | 4.50e-11 | 44 |
neurectodermal cell | 4.50e-11 | 44 |
neural cell | 4.52e-11 | 43 |
neuron | 6.86e-11 | 33 |
neuronal stem cell | 6.86e-11 | 33 |
neuroblast | 6.86e-11 | 33 |
electrically signaling cell | 6.86e-11 | 33 |
electrically responsive cell | 9.63e-09 | 39 |
electrically active cell | 9.63e-09 | 39 |
CNS neuron (sensu Vertebrata) | 6.17e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.17e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.61e-16 | 95 |
ectoderm | 2.61e-16 | 95 |
presumptive ectoderm | 2.61e-16 | 95 |
central nervous system | 3.77e-16 | 73 |
nervous system | 1.45e-15 | 75 |
intestine | 1.18e-13 | 31 |
organ system subdivision | 1.12e-11 | 194 |
regional part of nervous system | 2.54e-11 | 54 |
ecto-epithelium | 2.94e-11 | 73 |
neurectoderm | 4.27e-11 | 64 |
neural plate | 4.27e-11 | 64 |
presumptive neural plate | 4.27e-11 | 64 |
neural tube | 3.71e-10 | 52 |
neural rod | 3.71e-10 | 52 |
future spinal cord | 3.71e-10 | 52 |
neural keel | 3.71e-10 | 52 |
gastrointestinal system | 7.20e-10 | 47 |
brain | 1.58e-09 | 47 |
future brain | 1.58e-09 | 47 |
anterior neural tube | 1.70e-09 | 40 |
regional part of brain | 1.99e-09 | 46 |
regional part of forebrain | 2.19e-09 | 39 |
forebrain | 2.19e-09 | 39 |
future forebrain | 2.19e-09 | 39 |
pre-chordal neural plate | 3.35e-09 | 49 |
gray matter | 3.49e-09 | 34 |
mucosa | 6.86e-09 | 15 |
brain grey matter | 3.54e-08 | 29 |
regional part of telencephalon | 3.54e-08 | 29 |
telencephalon | 3.54e-08 | 29 |
intestinal mucosa | 1.03e-07 | 13 |
wall of intestine | 1.03e-07 | 13 |
gastrointestinal system mucosa | 1.03e-07 | 13 |