FFCP PHASE1:Mm9::chr5:31419095..31419100,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58522 | |EntrezGene=58522 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=35 | |MCL_coexpression_id=35 | ||
|TSSclassifier=NA | |||
|UniProt=E9QAT9 | |UniProt=E9QAT9 | ||
|association_with_transcript=-6bp_to_ENSMUST00000114637_5end | |association_with_transcript=-6bp_to_ENSMUST00000114637_5end | ||
|cluster_id=chr5:31419095..31419100,+ | |||
|description=CAGE_peak_6_at_Trim54_5end | |description=CAGE_peak_6_at_Trim54_5end | ||
|id=chr5:31419095..31419100,+ | |id=chr5:31419095..31419100,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!4.28e-09!5;UBERON:0002472!4.28e-09!5;UBERON:0008784!4.28e-09!5;UBERON:0006058!4.28e-09!5;UBERON:0004709!4.28e-09!5;UBERON:0005420!4.28e-09!5;UBERON:0006057!4.28e-09!5;UBERON:0000978!4.28e-09!5;UBERON:0002103!4.28e-09!5;UBERON:0000376!4.28e-09!5;UBERON:0000154!4.28e-09!5;UBERON:0005730!4.28e-09!5;UBERON:0002529!1.80e-07!6;UBERON:0000981!2.34e-07!4;UBERON:0002495!2.34e-07!4;UBERON:0003608!2.34e-07!4;UBERON:0003826!2.34e-07!4;UBERON:0008202!2.34e-07!4;UBERON:0004375!2.34e-07!4;UBERON:0002428!2.34e-07!4;UBERON:0003464!2.34e-07!4;UBERON:0003606!2.34e-07!4;UBERON:0009749!2.34e-07!4;UBERON:0003860!2.34e-07!4;UBERON:0005856!2.34e-07!4;UBERON:0005866!2.34e-07!4;UBERON:0007828!2.34e-07!4;UBERON:0005254!2.34e-07!4;UBERON:0001271!2.34e-07!4;UBERON:0002091!2.34e-07!4;UBERON:0001464!2.34e-07!4;UBERON:0003285!2.34e-07!4;UBERON:0010129!2.34e-07!4;UBERON:0006234!2.34e-07!4 | |ontology_enrichment_uberon=UBERON:0005418!4.28e-09!5;UBERON:0002472!4.28e-09!5;UBERON:0008784!4.28e-09!5;UBERON:0006058!4.28e-09!5;UBERON:0004709!4.28e-09!5;UBERON:0005420!4.28e-09!5;UBERON:0006057!4.28e-09!5;UBERON:0000978!4.28e-09!5;UBERON:0002103!4.28e-09!5;UBERON:0000376!4.28e-09!5;UBERON:0000154!4.28e-09!5;UBERON:0005730!4.28e-09!5;UBERON:0002529!1.80e-07!6;UBERON:0000981!2.34e-07!4;UBERON:0002495!2.34e-07!4;UBERON:0003608!2.34e-07!4;UBERON:0003826!2.34e-07!4;UBERON:0008202!2.34e-07!4;UBERON:0004375!2.34e-07!4;UBERON:0002428!2.34e-07!4;UBERON:0003464!2.34e-07!4;UBERON:0003606!2.34e-07!4;UBERON:0009749!2.34e-07!4;UBERON:0003860!2.34e-07!4;UBERON:0005856!2.34e-07!4;UBERON:0005866!2.34e-07!4;UBERON:0007828!2.34e-07!4;UBERON:0005254!2.34e-07!4;UBERON:0001271!2.34e-07!4;UBERON:0002091!2.34e-07!4;UBERON:0001464!2.34e-07!4;UBERON:0003285!2.34e-07!4;UBERON:0010129!2.34e-07!4;UBERON:0006234!2.34e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001374,1.63e-10,1;UBERON:0004252,1.63e-10,1;UBERON:0003663,1.63e-10,1;UBERON:0005090,1.63e-10,1;UBERON:0001630,1.63e-10,1;UBERON:0003661,1.63e-10,1;UBERON:0010890,1.63e-10,1;UBERON:0001383,1.63e-10,1;UBERON:0001723,3.74e-10,1;UBERON:0001033,3.74e-10,1;UBERON:0010056,3.74e-10,1;UBERON:0007100,2.94e-08,18;UBERON:0000948,2.94e-08,18;UBERON:0005498,2.94e-08,18;UBERON:0004140,2.94e-08,18;UBERON:0009881,2.94e-08,18;UBERON:0004141,2.94e-08,18;UBERON:0003084,2.94e-08,18;UBERON:0007005,2.94e-08,18;UBERON:0004139,2.94e-08,18;UBERON:0004291,2.94e-08,18;UBERON:0005418,4.02e-08,5;UBERON:0002472,4.02e-08,5;UBERON:0008784,4.02e-08,5;UBERON:0006058,4.02e-08,5;UBERON:0004709,4.02e-08,5;UBERON:0002529,4.02e-08,5;UBERON:0010538,4.02e-08,5;UBERON:0005420,4.02e-08,5;UBERON:0010758,4.02e-08,5;UBERON:0000978,4.02e-08,5;UBERON:0002103,4.02e-08,5;UBERON:0000376,4.02e-08,5;UBERON:0000154,4.02e-08,5;UBERON:0010709,4.02e-08,5;UBERON:0005730,4.02e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.485300549842228,0.441683036920787,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,2.26992666728396,2.33919979880532,1.75640092232841,6.71032093801859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,7.32165688892682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26730383615211,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.746661096422973,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.238436189947321,0.436039249896986,0.282328141245992,0.592302255241736,0,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.818462086339379,0.309873682371932,0.771626443924566,0.499621155875892,0.233931608445408,1.07435527024149,1.91288332068843,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.485300549842228,0.441683036920787,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,2.26992666728396,2.33919979880532,1.75640092232841,6.71032093801859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,7.32165688892682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26730383615211,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.758091635291392,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.746661096422973,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.238436189947321,0.436039249896986,0.282328141245992,0.592302255241736,0,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.818462086339379,0.309873682371932,0.771626443924566,0.499621155875892,0.233931608445408,1.07435527024149,1.91288332068843,0,0.463735671240843 | ||
|short_description=p6@Trim54 | |short_description=p6@Trim54 | ||
}} | }} |
Latest revision as of 22:19, 25 September 2015
Short description: | p6@Trim54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Trim54_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | -6bp_to_ENSMUST00000114637_5end |
EntrezGene: | Trim54 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
biceps femoris | 1.63e-10 | 1 |
hindlimb stylopod muscle | 1.63e-10 | 1 |
hindlimb muscle | 1.63e-10 | 1 |
muscle structure | 1.63e-10 | 1 |
muscle organ | 1.63e-10 | 1 |
limb muscle | 1.63e-10 | 1 |
pelvic complex muscle | 1.63e-10 | 1 |
muscle of leg | 1.63e-10 | 1 |
tongue | 3.74e-10 | 1 |
gustatory system | 3.74e-10 | 1 |
future tongue | 3.74e-10 | 1 |
primary circulatory organ | 2.94e-08 | 18 |
heart | 2.94e-08 | 18 |
primitive heart tube | 2.94e-08 | 18 |
primary heart field | 2.94e-08 | 18 |
anterior lateral plate mesoderm | 2.94e-08 | 18 |
heart tube | 2.94e-08 | 18 |
heart primordium | 2.94e-08 | 18 |
cardiac mesoderm | 2.94e-08 | 18 |
cardiogenic plate | 2.94e-08 | 18 |
heart rudiment | 2.94e-08 | 18 |
hindlimb bud | 4.02e-08 | 5 |
stylopod | 4.02e-08 | 5 |
lower limb segment | 4.02e-08 | 5 |
multi-limb segment region | 4.02e-08 | 5 |
pelvic appendage | 4.02e-08 | 5 |
limb segment | 4.02e-08 | 5 |
paired limb/fin segment | 4.02e-08 | 5 |
pelvic appendage bud | 4.02e-08 | 5 |
subdivision of organism along appendicular axis | 4.02e-08 | 5 |
leg | 4.02e-08 | 5 |
hindlimb | 4.02e-08 | 5 |
hindlimb stylopod | 4.02e-08 | 5 |
posterior region of body | 4.02e-08 | 5 |
pelvic complex | 4.02e-08 | 5 |
hindlimb/pelvic fin field | 4.02e-08 | 5 |