FFCP PHASE1:Hg19::chr2:54194783..54194785,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:54194783..54194785,-
|short_description=p@chr2:54194783..54194785,-
|description=CAGE_peak_at_chr2:54194783..54194785,-
|association_with_transcript=NA
|E...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:54194783..54194785,- | |||
|coexpression_cluster_id=C416 | |||
|description=CAGE_peak_at_chr2:54194783..54194785,- | |||
|id=chr2:54194783..54194785,- | |||
|ontology_enrichment_celltype=CL:0000738!5.12e-10!140;CL:0002031!1.71e-08!124;CL:0002087!7.76e-08!119;CL:0000037!8.46e-08!172;CL:0000566!8.46e-08!172;CL:0002057!2.01e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.65e-07;6!CL:0002393;2.10e-07;6!CL:0002397;2.10e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.43e-11,136;CL:0002393,1.41e-09,9;CL:0002397,1.41e-09,9;CL:0002031,2.82e-09,120;CL:0000860,4.18e-08,42;CL:0002057,4.18e-08,42;CL:0002087,5.34e-08,115;CL:0000766,7.51e-08,72;CL:0000037,1.99e-07,168;CL:0000624,3.30e-07,6;CL:0000473,4.36e-07,48;CL:0000234,4.36e-07,48;CL:0000839,5.54e-07,66;CL:0000557,6.72e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-13!115;UBERON:0003080!3.52e-07!42;UBERON:0002780!4.30e-07!41;UBERON:0001890!4.30e-07!41;UBERON:0006240!4.30e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-07,98;UBERON:0003061,1.51e-07,98 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0.286235987131057,0.684372125364421,0,0.61130724598361,0.492603536699674,0.472264687882075,1.57345710739562,5.75744097145819,1.54816123316076,0.919421224478927,0,0,0.46480320348181,0.995184627411951,0.587200878669695,8.86392653651004,6.01633342410425,11.5015761479401,0.223915474239924,0.32389366601898,1.03030227053675,1.16318591023652,0.755751887377619,0.727752183563449,1.85943229524548,1.6446715520873,1.85823822537062,2.58923153089935,0.512321413058201,0.709446689665756,1.37898272294647,0.645484683583826,0,1.31769637679823,0,0.674170453335254,1.53041946185451,0,0,0.329851300186716,1.39624560335142,0,0.870627715885752,1.13477044938228,2.4912889959823,0.75374599577023,0.521482918420201,0.65156653411535,1.21079900526674,0.736555271975129,1.58231193720442,1.05627643155971,4.03948169933583,1.46761051855863,1.34794357375794,4.20495299956218,0.48217676009124,1.14005097496499,2.58591680358817,2.92262646023414,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,2.84606484554724,2.34894875748376,4.20500550937752,1.32171328579026,3.36305137788922,0.263384084775077,3.540775862049,8.64623678048162,7.81285696198135,0.334372990781356,2.28145586643513,1.89379122293893,1.94826728407911,0.891283655081389,2.06224135232386,1.99380505125259,1.35401931882508,3.20228299314188,2.34106825607781,2.13769275984779,2.48715016007264,0.579606171470105,2.81744470007915,1.87278579662799,5.22677619024884,0.113309342697566,1.14966148080576,1.71813722741315,3.03623630423403,0,0.651083453856419,0.950452044448374,0,0.383959833463255,2.49861453104692,0.473554504088034,0,7.4594494993151,11.7673686144743,8.11016661743674,0,0,0,1.44575660953827,0,0.579386075843295,0,0.486634870302636,0.378139268656271,0.443458794925128,0.614843499851882,0.916853528483988,0,0,0,0.522389211897802,0.26591592103773,1.19245312152671,0.571994910780128,0.74291500265913,0,0,1.38856200643038,0,0.419499436209906,0,0.208994966536811,1.03366703667732,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.535798369704479,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0.993943903390637,0.506522046658319,1.85372853138506,0.573673241497627,0,0,0,0,0.311211035399766,0.404132016209064,0.980771418680752,0.302714855289863,0,0,0,0,0,0.587172493218824,1.13311061057692,1.12360645361799,0.816616685019573,0.61417158655884,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0.375355559615893,0,0.438977620880838,0.30648779579902,0.600952235626387,0,0.538168907066586,0.640672166455702,0,1.50045548042201,0.618315175430633,2.06112432036503,0.18611685633159,0.843881661206331,0.292311015483596,2.01947019395292,0.552299391853796,0.323292113637624,2.13005755509969,0.10075209822764,0.169560592310488,0.193260853163297,0.818238361772504,0,0.487894824518382,0.132529768321485,0.580969714347592,0.207322110030741,0,1.45990943630332,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,1.32438929824395,0,0.343135620597051,0.219500570817251,0,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0.925971025153221,0,0,0,0.492434012174795,0.468008530278475,0.148631162288728,0,0.503946384596579,0.141775097242386,0.0895585227028483,0,0,0,0.528290604079356,1.03664057770386,1.72943944100354,2.14612136824846,0,0,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.560425719967636,4.53170748464433,10.9970063178354,8.98401253958239,0.254094624222463,0,0,0.502548796003046,0,2.99602809578873,8.97484377612075,0.828831026872071,0,0,0,0.415941723061614,0.535286966391485,0.946214490203608,0.702848489956279,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,4.34212854858063,8.84428223356329,2.881644060693,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0.482561763430822,0,0.308419387605311,0,0.246381468041427,0,0.232420756919918,0.846016147141356,0.200506470303285,0.276242966807689,0,0,0.393373244878272,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.509752546090077,0,0,1.97333888981341,2.3529190592241,0,0,0.325378394664303,1.854738209659,0.824125183365091,1.32015199872941,0,0,0,0.290012154876366,0.462145851343933,0.767518373630648,0.689182862422653,0.429680979473094,0.435050081742686,0,0.0890320356467374,0.330569830721956,0.192190067365106,2.04180339991335,0.2023155617111,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.511795582622668,0,0,0,1.07923474549989,0.823611089208164,0.471249609382746,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.8484325917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| ||
|short_description=p@chr2:54194783..54194785,- | |||
}} | }} |
Latest revision as of 10:47, 29 July 2015
Short description: | p@chr2:54194783..54194785, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:54194783..54194785, - |
Coexpression cluster: | C416_CD4_Neutrophils_CD8_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.43e-11 | 136 |
intermediate monocyte | 1.41e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.41e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 2.82e-09 | 120 |
classical monocyte | 4.18e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.18e-08 | 42 |
nongranular leukocyte | 5.34e-08 | 115 |
myeloid leukocyte | 7.51e-08 | 72 |
hematopoietic stem cell | 1.99e-07 | 168 |
CD4-positive, alpha-beta T cell | 3.30e-07 | 6 |
defensive cell | 4.36e-07 | 48 |
phagocyte | 4.36e-07 | 48 |
myeloid lineage restricted progenitor cell | 5.54e-07 | 66 |
granulocyte monocyte progenitor cell | 6.72e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-07 | 98 |
blood island | 1.51e-07 | 98 |