FFCP PHASE1:Hg19::chr3:107941436..107941490,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:107941436..107941490,+
|short_description=p@chr3:107941436..107941490,+
|description=CAGE_peak_at_chr3:107941436..107941490,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:107941436..107941490,+ | |||
|coexpression_cluster_id=C1577 | |||
|description=CAGE_peak_at_chr3:107941436..107941490,+ | |||
|id=chr3:107941436..107941490,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.38e-43!140;CL:0000037!1.68e-39!172;CL:0000566!1.68e-39!172;CL:0002031!2.37e-36!124;CL:0002032!3.95e-36!165;CL:0000837!3.95e-36!165;CL:0000988!3.97e-36!182;CL:0002087!7.98e-35!119;CL:0000542!6.23e-23!53;CL:0000051!6.23e-23!53;CL:0000838!1.35e-22!52;CL:0002057!2.54e-17!42;CL:0000860!9.78e-16!45;CL:0000766!3.91e-15!76;CL:0000763!9.34e-15!112;CL:0000049!9.34e-15!112;CL:0000557!2.24e-14!71;CL:0000134!2.33e-14!358;CL:0002320!2.22e-13!365;CL:0000839!2.27e-13!70;CL:0000791!3.86e-13!18;CL:0000789!3.86e-13!18;CL:0002420!3.86e-13!18;CL:0002419!3.86e-13!18;CL:0000790!3.86e-13!18;CL:0000084!6.71e-13!25;CL:0000827!6.71e-13!25;CL:0002009!1.96e-12!65;CL:0000219!1.97e-11!390;CL:0002194!2.22e-11!63;CL:0000576!2.22e-11!63;CL:0000040!2.22e-11!63;CL:0000559!2.22e-11!63;CL:0000048!6.47e-10!430;CL:0000034!1.41e-09!444;CL:0000723!2.62e-09!436;CL:0000236!4.47e-09!14;CL:0000945!9.00e-09!24;CL:0000826!9.00e-09!24;CL:0000625!1.02e-08!11;CL:0002393!1.28e-07!9;CL:0002397!1.28e-07!9;CL:0000451!2.51e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.29e-24;18!CL:0000789;1.29e-24;18!CL:0002419;1.29e-24;18!CL:0000542;1.04e-19;53!CL:0000236;3.35e-19;13!CL:0000084;1.51e-16;25!CL:0002087;1.55e-15;104!CL:0000625;1.58e-14;11!CL:0000624;7.09e-14;6!CL:0002393;3.11e-13;6!CL:0002397;3.11e-13;6!CL:0000945;6.06e-13;24!CL:0000738;6.01e-11;136!CL:0000451;8.75e-11;10!CL:0000453;5.11e-10;5!CL:0000576;1.12e-09;48!CL:0000988;1.34e-09;177!CL:0000766;2.95e-09;69!CL:0000623;2.32e-08;3!CL:0000767;9.96e-08;3!CL:0000990;1.18e-07;8!CL:0000898;2.28e-07;3!CL:0000219;2.94e-07;193!CL:0000784;4.93e-07;3!CL:0000860;5.61e-07;33!CL:0002057;5.61e-07;33!CL:0000094;8.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.42e-65,136;CL:0000037,1.37e-56,168;CL:0000988,1.00e-52,177;CL:0002032,6.44e-49,161;CL:0000837,6.44e-49,161;CL:0002031,3.93e-48,120;CL:0002087,5.68e-46,115;CL:0000838,1.93e-33,52;CL:0000542,1.26e-32,53;CL:0000051,1.26e-32,53;CL:0000791,1.33e-24,18;CL:0000789,1.33e-24,18;CL:0002420,1.33e-24,18;CL:0002419,1.33e-24,18;CL:0000790,1.33e-24,18;CL:0000766,1.98e-19,72;CL:0000763,1.65e-18,108;CL:0000049,1.65e-18,108;CL:0000134,2.76e-18,354;CL:0000557,5.26e-18,67;CL:0000236,1.44e-17,14;CL:0002320,1.48e-17,361;CL:0000084,1.54e-16,25;CL:0000827,1.54e-16,25;CL:0000860,4.25e-16,42;CL:0002057,4.25e-16,42;CL:0000219,5.39e-15,386;CL:0000625,1.58e-14,11;CL:0002393,2.56e-14,9;CL:0002397,2.56e-14,9;CL:0000839,3.39e-14,66;CL:0002009,5.19e-14,61;CL:0000624,7.45e-14,6;CL:0000473,2.19e-13,48;CL:0000234,2.19e-13,48;CL:0000034,6.70e-13,441;CL:0000945,7.42e-13,24;CL:0000826,7.42e-13,24;CL:0002194,5.51e-12,59;CL:0000576,5.51e-12,59;CL:0000040,5.51e-12,59;CL:0000559,5.51e-12,59;CL:0000048,6.86e-12,427;CL:0000723,1.83e-11,433;CL:0000451,9.03e-11,10;CL:0000453,5.38e-10,5;CL:0000623,2.36e-08,3;CL:0000825,2.36e-08,3;CL:0000767,8.15e-08,3;CL:0000990,1.22e-07,8;CL:0000898,2.31e-07,3;CL:0000784,4.89e-07,3;CL:0000094,8.27e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.29e-24;18!CL:0000051;1.04e-19;53!CL:0002057;5.94e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.41e-16!102;UBERON:0003061!2.41e-16!102;UBERON:0002193!9.70e-15!112;UBERON:0002371!7.02e-14!80;UBERON:0001474!6.42e-13!86;UBERON:0002384!1.05e-12!375;UBERON:0004765!1.34e-08!101;UBERON:0001434!1.34e-08!101;UBERON:0002405!1.65e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.73e-21,98;UBERON:0003061,2.73e-21,98;UBERON:0002193,2.39e-18,108;UBERON:0002371,7.65e-18,76;UBERON:0002384,1.46e-16,371;UBERON:0001474,6.22e-16,82;UBERON:0002405,2.40e-15,93;UBERON:0004765,8.55e-14,90;UBERON:0001434,1.27e-11,100 | |||
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|short_description=p@chr3:107941436..107941490,+ | |||
}} | }} |
Latest revision as of 14:04, 29 July 2015
Short description: | p@chr3:107941436..107941490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:107941436..107941490, + |
Coexpression cluster: | C1577_Mast_CD4_CD34_CD8_Natural_CD14_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.73e-21 | 98 |
blood island | 2.73e-21 | 98 |
hemolymphoid system | 2.39e-18 | 108 |
bone marrow | 7.65e-18 | 76 |
connective tissue | 1.46e-16 | 371 |
bone element | 6.22e-16 | 82 |
immune system | 2.40e-15 | 93 |
skeletal element | 8.55e-14 | 90 |
skeletal system | 1.27e-11 | 100 |