FFCP PHASE1:Hg19::chr3:110688681..110688685,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:110688681..110688685,-
|short_description=p@chr3:110688681..110688685,-
|description=CAGE_peak_at_chr3:110688681..110688685,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:110688681..110688685,- | |||
|description=CAGE_peak_at_chr3:110688681..110688685,- | |||
|id=chr3:110688681..110688685,- | |||
|ontology_enrichment_celltype=CL:0000222!2.67e-16!119;CL:0002321!6.20e-16!248;CL:0000220!9.57e-16!246;CL:0000213!2.09e-10!57;CL:0000215!2.09e-10!57;CL:0000066!4.07e-09!254;CL:1000413!9.28e-09!9;CL:0000071!1.14e-08!18;CL:0002546!1.14e-08!18;CL:0002078!1.40e-08!44;CL:0000115!2.66e-08!35;CL:0002139!3.53e-08!24;CL:0000393!1.23e-07!60;CL:0000211!1.23e-07!60;CL:1000497!1.40e-07!18;CL:0002518!1.40e-07!18;CL:1000449!1.59e-07!16;CL:0000183!8.16e-07!59;CL:0000187!8.58e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:1000497;7.83e-12;17!CL:0002518;7.83e-12;17!CL:1000413;2.43e-11;9!CL:1000507;2.90e-11;10!CL:1000494;2.90e-11;10!CL:1000449;3.13e-11;15!CL:0000071;1.09e-10;18!CL:0000306;1.55e-09;4!CL:0002222;1.55e-09;4!CL:0002224;1.55e-09;4!CL:0002544;3.36e-09;6!CL:0000064;1.68e-08;3!CL:0000067;1.68e-08;3!CL:0005012;1.68e-08;3!CL:0002304;1.68e-08;3!CL:0002139;1.71e-07;24!CL:0002590;2.60e-07;3!CL:0002504;8.36e-07;3!CL:1000279;8.36e-07;3!CL:0000346;8.36e-07;3!CL:1000428;8.36e-07;3!CL:1000280;8.36e-07;3!CL:0000075;9.39e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,6.62e-12,17;CL:0002518,6.62e-12,17;CL:1000449,2.99e-11,15;CL:1000507,3.42e-11,10;CL:1000494,3.42e-11,10;CL:1000413,4.09e-11,9;CL:0000066,1.16e-10,253;CL:0000071,1.61e-10,18;CL:0002546,1.61e-10,18;CL:0002321,1.41e-09,250;CL:0000306,1.65e-09,4;CL:0002222,1.65e-09,4;CL:0002224,1.65e-09,4;CL:0000213,2.05e-09,58;CL:0000215,2.05e-09,58;CL:0002544,4.47e-09,6;CL:0000222,8.43e-09,121;CL:0000064,1.65e-08,3;CL:0000067,1.65e-08,3;CL:0005012,1.65e-08,3;CL:0002304,1.65e-08,3;CL:0002078,8.02e-08,45;CL:0000115,1.49e-07,36;CL:0002139,2.26e-07,24;CL:0002590,2.64e-07,3;CL:0000346,5.57e-07,3;CL:1000428,5.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.09e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr3:110688681..110688685,- | |||
}} | }} |
Latest revision as of 14:08, 29 July 2015
Short description: | p@chr3:110688681..110688685, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:110688681..110688685, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 6.62e-12 | 17 |
kidney epithelial cell | 6.62e-12 | 17 |
epithelial cell of nephron | 2.99e-11 | 15 |
kidney tubule cell | 3.42e-11 | 10 |
nephron tubule epithelial cell | 3.42e-11 | 10 |
endothelial cell of artery | 4.09e-11 | 9 |
epithelial cell | 1.16e-10 | 253 |
blood vessel endothelial cell | 1.61e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.61e-10 | 18 |
embryonic cell | 1.41e-09 | 250 |
crystallin accumulating cell | 1.65e-09 | 4 |
vertebrate lens cell | 1.65e-09 | 4 |
lens epithelial cell | 1.65e-09 | 4 |
lining cell | 2.05e-09 | 58 |
barrier cell | 2.05e-09 | 58 |
aortic endothelial cell | 4.47e-09 | 6 |
mesodermal cell | 8.43e-09 | 121 |
ciliated cell | 1.65e-08 | 3 |
ciliated epithelial cell | 1.65e-08 | 3 |
multi-ciliated epithelial cell | 1.65e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.65e-08 | 3 |
meso-epithelial cell | 8.02e-08 | 45 |
endothelial cell | 1.49e-07 | 36 |
endothelial cell of vascular tree | 2.26e-07 | 24 |
smooth muscle cell of the brain vasculature | 2.64e-07 | 3 |
hair follicle dermal papilla cell | 5.57e-07 | 3 |
stem cell of epidermis | 5.57e-07 | 3 |