FFCP PHASE1:Hg19::chr3:149051346..149051364,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:149051346..149051364,-
|short_description=p3@TM4SF18
|description=CAGE_peak_3_at_TM4SF18_5end
|association_with_transcript=54bp_to_uc003exa.2_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116441 | |EntrezGene=116441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25181 | |HGNC=25181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_uc003exa.2_5end | |||
|cluster_id=chr3:149051346..149051364,- | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_3_at_TM4SF18_5end | |||
|id=chr3:149051346..149051364,- | |||
|ontology_enrichment_celltype=CL:0002139!6.36e-25!24;CL:0000115!1.41e-21!35;CL:0000071!1.35e-18!18;CL:0002546!1.35e-18!18;CL:0002078!8.05e-17!44;CL:1000413!4.77e-10!9;CL:0000213!2.10e-09!57;CL:0000215!2.10e-09!57;CL:0005020!6.87e-08!6;CL:0002138!6.87e-08!6;CL:0005022!6.87e-08!6;CL:0002544!3.07e-07!6;CL:0002543!4.87e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.27e-32;24!CL:0000115;6.78e-26;36!CL:0000071;3.67e-24;18!CL:0002078;2.03e-15;45!CL:1000413;7.44e-13;9!CL:0002138;5.22e-10;6!CL:0000213;9.72e-10;58!CL:0000215;9.72e-10;58!CL:0002544;3.95e-09;6!CL:0002543;9.11e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.56e-33,24;CL:0000115,9.35e-31,36;CL:0000071,2.75e-24,18;CL:0002546,2.75e-24,18;CL:0002078,6.03e-24,45;CL:0000213,6.60e-15,58;CL:0000215,6.60e-15,58;CL:1000413,7.09e-13,9;CL:0005020,5.29e-10,6;CL:0002138,5.29e-10,6;CL:0005022,5.29e-10,6;CL:0002544,3.87e-09,6;CL:0002543,7.14e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.67e-24;18!CL:0005022;5.22e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.91e-46!115;UBERON:0001049!3.41e-27!57;UBERON:0005068!3.41e-27!57;UBERON:0006241!3.41e-27!57;UBERON:0007135!3.41e-27!57;UBERON:0005743!9.48e-27!86;UBERON:0003075!3.33e-26!86;UBERON:0007284!3.33e-26!86;UBERON:0004111!9.78e-26!241;UBERON:0000025!1.18e-25!194;UBERON:0002616!1.37e-25!59;UBERON:0000477!5.57e-25!286;UBERON:0000073!8.37e-25!94;UBERON:0001016!8.37e-25!94;UBERON:0001017!2.40e-24!82;UBERON:0002346!5.03e-24!90;UBERON:0000955!6.10e-23!69;UBERON:0006238!6.10e-23!69;UBERON:0003080!1.18e-21!42;UBERON:0002780!6.15e-21!41;UBERON:0001890!6.15e-21!41;UBERON:0006240!6.15e-21!41;UBERON:0003056!3.47e-19!61;UBERON:0000119!5.89e-19!312;UBERON:0001986!1.35e-18!18;UBERON:0004638!1.35e-18!18;UBERON:0004852!1.35e-18!18;UBERON:0000483!2.32e-18!309;UBERON:0002020!3.37e-18!34;UBERON:0003528!3.37e-18!34;UBERON:0001893!1.29e-17!34;UBERON:0002791!5.10e-17!33;UBERON:0001869!1.75e-16!32;UBERON:0000153!7.34e-16!129;UBERON:0007811!7.34e-16!129;UBERON:0000487!1.15e-15!22;UBERON:0000033!6.10e-15!123;UBERON:0004121!4.97e-13!169;UBERON:0006914!7.86e-13!25;UBERON:0000467!1.47e-12!625;UBERON:0000480!1.92e-12!626;UBERON:0000924!3.44e-12!173;UBERON:0006601!3.44e-12!173;UBERON:0002619!3.64e-12!22;UBERON:0000956!6.88e-12!25;UBERON:0000203!6.88e-12!25;UBERON:0000468!7.70e-12!659;UBERON:0000481!9.49e-11!347;UBERON:0001950!1.42e-10!20;UBERON:0000064!2.74e-10!219;UBERON:0003915!4.77e-10!9;UBERON:0004700!4.77e-10!9;UBERON:0001917!4.77e-10!9;UBERON:0000475!5.32e-10!365;UBERON:0000922!4.71e-09!612;UBERON:0002308!4.05e-08!9;UBERON:0000125!4.05e-08!9;UBERON:0002049!4.97e-08!79;UBERON:0007798!4.97e-08!79;UBERON:0002050!5.71e-08!605;UBERON:0005423!5.71e-08!605;UBERON:0002298!8.56e-08!8;UBERON:0000062!8.59e-08!511;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0002420!1.86e-07!9;UBERON:0007245!1.86e-07!9;UBERON:0010009!1.86e-07!9;UBERON:0010011!1.86e-07!9;UBERON:0000454!1.86e-07!9;UBERON:0000055!3.83e-07!69;UBERON:0001009!7.26e-07!113;UBERON:0003076!8.69e-07!15;UBERON:0003057!8.69e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.67e-24;18!UBERON:0001986;3.67e-24;18!UBERON:0004852;3.67e-24;18!UBERON:0000487;7.11e-21;22!UBERON:0006914;1.56e-17;25!UBERON:0002780;2.73e-15;41!UBERON:0001890;2.73e-15;41!UBERON:0000073;5.32e-14;53!UBERON:0002616;5.32e-14;53!UBERON:0003528;1.10e-13;34!UBERON:0002020;1.10e-13;34!UBERON:0001893;1.50e-13;34!UBERON:0002791;3.42e-13;32!UBERON:0001869;5.24e-13;32!UBERON:0003915;7.44e-13;9!UBERON:0004700;7.44e-13;9!UBERON:0001917;7.44e-13;9!UBERON:0000490;3.97e-12;33!UBERON:0007023;1.37e-11;114!UBERON:0002619;6.27e-11;22!UBERON:0001017;3.25e-10;75!UBERON:0000125;3.85e-10;9!UBERON:0002308;3.85e-10;9!UBERON:0000955;3.10e-09;68!UBERON:0000956;3.95e-09;25!UBERON:0000203;3.95e-09;25!UBERON:0001950;4.55e-09;20!UBERON:0001016;5.64e-08;83!UBERON:0002298;5.88e-08;6!UBERON:0009663;6.23e-08;7!UBERON:0002420;1.21e-07;9!UBERON:0007245;1.21e-07;9!UBERON:0010009;1.21e-07;9!UBERON:0010011;1.21e-07;9!UBERON:0000454;1.21e-07;9!UBERON:0001473;3.79e-07;8!UBERON:0004536;3.79e-07;8!UBERON:0006558;3.79e-07;8!UBERON:0002465;7.32e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.75e-43,114;UBERON:0004111,5.74e-29,240;UBERON:0000025,4.31e-28,192;UBERON:0001049,7.06e-27,56;UBERON:0005068,7.06e-27,56;UBERON:0006241,7.06e-27,56;UBERON:0007135,7.06e-27,56;UBERON:0000073,1.71e-24,53;UBERON:0002616,1.71e-24,53;UBERON:0004638,2.75e-24,18;UBERON:0001986,2.75e-24,18;UBERON:0004852,2.75e-24,18;UBERON:0001017,1.13e-22,81;UBERON:0000955,7.62e-22,68;UBERON:0006238,7.62e-22,68;UBERON:0003075,1.32e-21,82;UBERON:0007284,1.32e-21,82;UBERON:0000487,5.45e-21,22;UBERON:0002780,2.99e-20,41;UBERON:0001890,2.99e-20,41;UBERON:0003080,2.99e-20,41;UBERON:0006240,2.99e-20,41;UBERON:0002346,6.54e-20,86;UBERON:0001016,7.09e-20,89;UBERON:0010314,4.92e-18,132;UBERON:0006914,1.24e-17,25;UBERON:0000119,1.42e-16,309;UBERON:0003528,1.80e-16,34;UBERON:0002020,1.80e-16,34;UBERON:0000483,7.35e-16,306;UBERON:0003056,7.58e-16,61;UBERON:0001893,7.88e-16,34;UBERON:0010371,1.10e-15,104;UBERON:0002791,1.54e-14,32;UBERON:0001869,2.00e-14,32;UBERON:0003915,7.09e-13,9;UBERON:0004700,7.09e-13,9;UBERON:0001917,7.09e-13,9;UBERON:0011216,2.38e-12,223;UBERON:0002619,9.13e-11,22;UBERON:0000125,2.62e-10,9;UBERON:0002308,2.62e-10,9;UBERON:0004121,2.58e-09,171;UBERON:0000924,2.58e-09,171;UBERON:0006601,2.58e-09,171;UBERON:0000055,4.68e-09,68;UBERON:0000956,5.43e-09,25;UBERON:0000203,5.43e-09,25;UBERON:0001950,6.98e-09,20;UBERON:0002049,8.03e-09,78;UBERON:0007798,8.03e-09,78;UBERON:0003914,1.43e-08,117;UBERON:0004872,2.35e-08,83;UBERON:0009663,4.48e-08,7;UBERON:0002298,5.73e-08,6;UBERON:0001009,6.32e-08,112;UBERON:0004535,6.88e-08,109;UBERON:0003076,8.56e-08,15;UBERON:0003057,8.56e-08,15;UBERON:0002420,9.50e-08,9;UBERON:0007245,9.50e-08,9;UBERON:0010009,9.50e-08,9;UBERON:0010011,9.50e-08,9;UBERON:0000454,9.50e-08,9;UBERON:0001473,3.83e-07,8;UBERON:0004536,3.83e-07,8;UBERON:0006558,3.83e-07,8;UBERON:0002465,5.77e-07,10;UBERON:0000922,7.58e-07,592;UBERON:0005423,9.20e-07,581 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.55725123687061,0,0,0,0.795285947051099,0,0.189069634328136,0,0.351339142772504,3.40545596294053,0,0,0,0,0,0,0,0,13.1183188862025,4.30117297553062,12.1499175562658,6.78369530308812,7.97048928798821,5.50236083880135,7.73281376186199,52.7170188705431,41.2688864716584,61.5885927486993,82.5800100073751,20.5273468543998,51.2530320851156,35.2956557132034,4.86085168729056,50.2757470239369,13.4717623575702,16.6664991115317,6.13266549863533,1.89853131913626,7.32806975721629,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,1.48181739276657,1.14423332179421,3.17850598054356,2.30470369792,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6209745479887,1.40241773803446,0,0,1.26755034821831,0,1.18157981336281,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,2.88662684050547,0.34779121492523,0,52.9824863283141,45.8355657450845,44.3292174706614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0.857479297891735,1.23344192779897,0,2.42016343209135,0,0,4.22651376278,0,0,0,0,0,0.142977993658148,0,0,4.88604276440603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,6.8240030442538,14.6280586537803,9.28438439239199,1.54227252690289,0,0,2.54876273045038,0,0,0,0,10.2580050046556,0.328014645699706,1.30151357865721,1.95777922130672,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33061483573184,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66270448179735,0,0,4.54617834890261,0,0,0,0.994147647766298,2.39138007897872,0,0,0.211125408127993,0.19924798825107,0.828851746593443,0,0,0,0,8.08815160325942,0,0,1.08507746200627,0,0,1.93866549219044,4.54563680993071,0,0,0,2.89999830173917,0,0,0,0,0,0,1.77148277162768,3.0149109656352,0,1.87984741883082,1.18219047581419,0.438770794307945,0,0,2.38545801361771,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,29.1177329048677,0.163232808159148,0,0,0.995261931078505,1.41532103205343,3.66618086960175,0,0,0,1.07841812769083,4.81546588379273,3.74823113160543,0,0,8.01175252462506,1.57833761139756,3.62972148145992,1.22429104652196,2.52746318513952,0,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,4.02156551738102,0.173559738335131,0,0,1.92199335066233,0,0,0,0,2.13375836274523,0,2.93774963014692,0,0.19871461170299,2.46912104227927,0,0,0.426905989478705,0,0.144090417154106,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0,4.20294202096853,4.79168826121976,0,0,0,0.558564802544508,1.83328339209347,1.43574604915363,0.798716001995964,0.429226048136571,1.56220020209311,2.28423806454869,0,0,0,0,0,2.85439696392771,0,3.97614844904652,5.5843396505746,0.643012593860077,1.51293380256957,2.07720169014593,0,0,2.67298049295309,0,6.54087370583345,2.51782023047991,1.6896053843105,0.537862017998534,0,6.4322579373603,3.31045985182716,0,0,0,0,0,0,0,0,1.75862680413699,0,3.61992277812342,5.68600187493567,1.88195521672762,0,2.0289608387862,4.87333345808964,0.414239055347196,1.9846640872478,0,0,0,1.08803560673895,4.2617281983859,1.22538230705385,0.983617892129413,0.157054096250234,0.886068179966986,2.56255156294123,3.254964198369,6.30750115259078,2.66229723688445,2.35966331177257,0.968440444553616,0,1.66814029295813,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86264752779733,0,4.15048033548593,1.64093091392604,0.504143392443436,0.622415272177961,1.61475645631851,1.42769420259154,0,0,0,0,0,0,0,1.72983755203292,0,2.34454203369928,0,0.163771917510097,0,1.95858995393344,1.56215619722769,2.06686796501184,2.60004821795018,0,0,3.47347824872506,0,0,0,2.35398605553177,1.21393120847326,2.73194629621557,4.96733272910777,0,12.5186246889315,4.48600237647089,1.05236437700559,0,0.111231401892069,2.51177897121645,2.35673384874003,0,5.47895232305697,8.85303123996348,0,4.28859265059938,0,1.74362138052188,0.173858272302579,0,0,0,0,0,0.709992004383392,0.511280428554946,1.27016115057279,0,0,0,0,0.588901401691458,0,0,3.18254701254366,2.3196288626764,2.91426595835484,0,0,0,0,0,0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| ||
|short_description=p3@TM4SF18 | |||
}} | }} |
Latest revision as of 21:14, 15 September 2015
Short description: | p3@TM4SF18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TM4SF18_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 54bp_to_uc003exa.2_5end |
EntrezGene: | TM4SF18 |
HGNC: | 25181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.56e-33 | 24 |
endothelial cell | 9.35e-31 | 36 |
blood vessel endothelial cell | 2.75e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.75e-24 | 18 |
meso-epithelial cell | 6.03e-24 | 45 |
lining cell | 6.60e-15 | 58 |
barrier cell | 6.60e-15 | 58 |
endothelial cell of artery | 7.09e-13 | 9 |
lymphangioblast | 5.29e-10 | 6 |
endothelial cell of lymphatic vessel | 5.29e-10 | 6 |
vascular lymphangioblast | 5.29e-10 | 6 |
aortic endothelial cell | 3.87e-09 | 6 |
vein endothelial cell | 7.14e-09 | 6 |