FFCP PHASE1:Hg19::chr3:156807583..156807614,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:156807583..156807614,+
|short_description=p8@LOC100498859
|description=CAGE_peak_8_at_LOC100498859_5end
|association_with_transcript=-55bp_to_ENST000004679...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100498859 | |EntrezGene=100498859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENST00000467995,ENST00000471719,ENST00000474477,NR_034008_5end | |||
|cluster_id=chr3:156807583..156807614,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_8_at_LOC100498859_5end | |||
|id=chr3:156807583..156807614,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.15e-26;1!UBERON:0005062;9.22e-26;4!UBERON:0007284;9.22e-26;4!UBERON:0010226;1.11e-25;1 | |||
|ontology_enrichment_disease=DOID:114!4.85e-14!2;DOID:178!8.00e-08!1;DOID:326!8.00e-08!1;DOID:3978!8.00e-08!1;DOID:3394!8.00e-08!1;DOID:5844!8.00e-08!1;DOID:1287!1.95e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.46e-50;2!DOID:178;4.61e-26;1!DOID:326;4.61e-26;1!DOID:3978;4.61e-26;1!DOID:3394;4.61e-26;1!DOID:5844;4.61e-26;1!DOID:1287;6.73e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.46e-50,2;DOID:178,4.61e-26,1;DOID:326,4.61e-26,1;DOID:3978,4.61e-26,1;DOID:3394,4.61e-26,1;DOID:5844,4.61e-26,1;DOID:1287,6.73e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!6.54e-20!3;UBERON:0009751!6.54e-20!3;UBERON:0000946!6.54e-20!3;UBERON:0002523!6.54e-20!3;UBERON:0005983!6.54e-20!3;UBERON:0002165!6.54e-20!3;UBERON:0002062!6.54e-20!3;UBERON:0007280!6.54e-20!3;UBERON:0004151!1.31e-19!3;UBERON:0007100!9.34e-18!27;UBERON:0002133!9.14e-14!2;UBERON:0002081!1.33e-13!2;UBERON:0007023!1.60e-13!115;UBERON:0000948!4.62e-09!24;UBERON:0005498!4.62e-09!24;UBERON:0004140!4.62e-09!24;UBERON:0009881!4.62e-09!24;UBERON:0004141!4.62e-09!24;UBERON:0003084!4.62e-09!24;UBERON:0007005!4.62e-09!24;UBERON:0004139!4.62e-09!24;UBERON:0004291!4.62e-09!24;UBERON:0003103!4.98e-09!69;UBERON:0002146!7.03e-08!1;UBERON:0005623!7.03e-08!1;UBERON:0002135!8.54e-08!1;UBERON:0002084!9.71e-08!1;UBERON:0002082!9.71e-08!1;UBERON:0004706!9.71e-08!1;UBERON:0002702!1.10e-07!1;UBERON:0002134!1.18e-07!1;UBERON:0005208!1.18e-07!1;UBERON:0005946!1.18e-07!1;UBERON:0005965!1.18e-07!1;UBERON:0002078!1.18e-07!1;UBERON:0002079!1.25e-07!1;UBERON:0007029!1.42e-07!1;UBERON:0000998!1.51e-07!1;UBERON:0006868!1.51e-07!1;UBERON:0002342!2.14e-07!14;UBERON:0005062!2.14e-07!14;UBERON:0003112!2.66e-07!1;UBERON:0000032!2.66e-07!1;UBERON:0005253!2.66e-07!1;UBERON:0003128!2.66e-07!1;UBERON:0002241!2.66e-07!1;UBERON:0001703!2.66e-07!1;UBERON:0004761!2.66e-07!1;UBERON:0009617!2.66e-07!1;UBERON:0007190!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.58e-48;25!UBERON:0003978;5.99e-34;3!UBERON:0000946;5.99e-34;3!UBERON:0002146;3.15e-26;1!UBERON:0005623;3.15e-26;1!UBERON:0002135;5.93e-26;1!UBERON:0002084;1.11e-25;1!UBERON:0002082;1.11e-25;1!UBERON:0000948;1.86e-18;22!UBERON:0002133;1.07e-13;2!UBERON:0010313;6.13e-11;10!UBERON:0003103;1.36e-09;61!UBERON:0004151;1.74e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.95e-45,27;UBERON:0003978,5.51e-34,3;UBERON:0009751,5.51e-34,3;UBERON:0000946,5.51e-34,3;UBERON:0002523,5.51e-34,3;UBERON:0005983,5.51e-34,3;UBERON:0002165,5.51e-34,3;UBERON:0002062,5.51e-34,3;UBERON:0007280,5.51e-34,3;UBERON:0002146,2.78e-26,1;UBERON:0005623,2.78e-26,1;UBERON:0002135,5.93e-26,1;UBERON:0002084,9.79e-26,1;UBERON:0002082,9.79e-26,1;UBERON:0010226,9.79e-26,1;UBERON:0003103,6.69e-18,68;UBERON:0000948,5.68e-17,24;UBERON:0005498,5.68e-17,24;UBERON:0004140,5.68e-17,24;UBERON:0009881,5.68e-17,24;UBERON:0004141,5.68e-17,24;UBERON:0003084,5.68e-17,24;UBERON:0007005,5.68e-17,24;UBERON:0004139,5.68e-17,24;UBERON:0004291,5.68e-17,24;UBERON:0004797,3.29e-15,7;UBERON:0002133,1.07e-13,2;UBERON:0010313,5.98e-11,10;UBERON:0002342,5.98e-11,10;UBERON:0005062,5.98e-11,10;UBERON:0001009,6.96e-11,112;UBERON:0004151,1.67e-09,3;UBERON:0007023,6.31e-08,114 | |||
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|short_description=p8@LOC100498859 | |||
}} | }} |
Latest revision as of 06:55, 16 September 2015
Short description: | p8@LOC100498859 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LOC100498859_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -55bp_to_ENST00000467995, ENST00000471719, ENST00000474477, NR_034008_5end |
EntrezGene: | LOC100498859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.95e-45 | 27 |
valve | 5.51e-34 | 3 |
cardiac mesenchyme | 5.51e-34 | 3 |
cardial valve | 5.51e-34 | 3 |
tunica intima | 5.51e-34 | 3 |
heart layer | 5.51e-34 | 3 |
endocardium | 5.51e-34 | 3 |
endocardial cushion | 5.51e-34 | 3 |
presumptive endocardium | 5.51e-34 | 3 |
pulmonary valve | 2.78e-26 | 1 |
semi-lunar valve | 2.78e-26 | 1 |
mitral valve | 5.93e-26 | 1 |
heart left ventricle | 9.79e-26 | 1 |
cardiac ventricle | 9.79e-26 | 1 |
future cardiac ventricle | 9.79e-26 | 1 |
compound organ | 6.69e-18 | 68 |
heart | 5.68e-17 | 24 |
primitive heart tube | 5.68e-17 | 24 |
primary heart field | 5.68e-17 | 24 |
anterior lateral plate mesoderm | 5.68e-17 | 24 |
heart tube | 5.68e-17 | 24 |
heart primordium | 5.68e-17 | 24 |
cardiac mesoderm | 5.68e-17 | 24 |
cardiogenic plate | 5.68e-17 | 24 |
heart rudiment | 5.68e-17 | 24 |
blood vessel layer | 3.29e-15 | 7 |
atrioventricular valve | 1.07e-13 | 2 |
neural crest-derived structure | 5.98e-11 | 10 |
neural crest | 5.98e-11 | 10 |
neural fold | 5.98e-11 | 10 |
circulatory system | 6.96e-11 | 112 |
cardiac chamber | 1.67e-09 | 3 |
adult organism | 6.31e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.46e-50 | 2 |
vascular disease | 4.61e-26 | 1 |
ischemia | 4.61e-26 | 1 |
extrinsic cardiomyopathy | 4.61e-26 | 1 |
myocardial ischemia | 4.61e-26 | 1 |
myocardial infarction | 4.61e-26 | 1 |
cardiovascular system disease | 6.73e-26 | 4 |