FFCP PHASE1:Hg19::chr3:76360054..76360097,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:76360054..76360097,+
|short_description=p4@ROBO2
|description=CAGE_peak_4_at_ROBO2_5end
|association_with_transcript=-149bp_to_ENST00000475034_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-149bp_to_ENST00000475034_5end | |||
|cluster_id=chr3:76360054..76360097,+ | |||
|coexpression_cluster_id=C4345 | |||
|description=CAGE_peak_4_at_ROBO2_5end | |||
|id=chr3:76360054..76360097,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.75e-07;2!CL:0000242;1.75e-07;2!CL:0002549;5.45e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.16e-07,2;CL:0002549,9.85e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.99e-16;82!UBERON:0006241;1.82e-10;3!UBERON:0003057;1.82e-10;3!UBERON:0010122;2.22e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.85e-59;32!UBERON:0003528;5.23e-59;34!UBERON:0002020;5.23e-59;34!UBERON:0002619;2.02e-58;22!UBERON:0002791;1.73e-55;32!UBERON:0001893;1.56e-53;34!UBERON:0001950;5.32e-53;20!UBERON:0000956;5.15e-51;25!UBERON:0000203;5.15e-51;25!UBERON:0002780;5.00e-48;41!UBERON:0001890;5.00e-48;41!UBERON:0000073;3.00e-40;53!UBERON:0002616;3.00e-40;53!UBERON:0001017;2.50e-32;75!UBERON:0000955;4.84e-29;68!UBERON:0001016;1.84e-25;83!UBERON:0000200;5.67e-20;6!UBERON:0002298;8.90e-19;6!UBERON:0002420;2.18e-18;9!UBERON:0007245;2.18e-18;9!UBERON:0010009;2.18e-18;9!UBERON:0010011;2.18e-18;9!UBERON:0000454;2.18e-18;9!UBERON:0000125;1.79e-17;9!UBERON:0002308;1.79e-17;9!UBERON:0001872;1.09e-16;5!UBERON:0000349;1.74e-16;5!UBERON:0002021;3.97e-16;5!UBERON:0000369;1.20e-14;4!UBERON:0002435;1.20e-14;4!UBERON:0000204;1.20e-14;4!UBERON:0009663;2.13e-12;7!UBERON:0001871;3.72e-12;6!UBERON:0005383;1.25e-11;3!UBERON:0005382;1.25e-11;3!UBERON:0007023;3.41e-11;114!UBERON:0001870;5.30e-11;3!UBERON:0002240;1.82e-10;3!UBERON:0005174;1.82e-10;3!UBERON:0001137;1.82e-10;3!UBERON:0001896;2.92e-10;3!UBERON:0005290;2.92e-10;3!UBERON:0000988;3.11e-10;3!UBERON:0011216;1.80e-09;132!UBERON:0004733;4.68e-09;12!UBERON:0002028;4.68e-09;12!UBERON:0001873;2.22e-08;2!UBERON:0004732;2.62e-08;13!UBERON:0001876;3.54e-08;2!UBERON:0002702;5.82e-08;2!UBERON:0001897;7.13e-08;2!UBERON:0010225;7.13e-08;2!UBERON:0001894;8.07e-08;7!UBERON:0002771;8.29e-08;2!UBERON:0010314;1.04e-07;132!UBERON:0001954;5.45e-07;2!UBERON:0002148;5.45e-07;2!UBERON:0005629;5.45e-07;2!UBERON:0006331;5.45e-07;2!UBERON:0009662;5.45e-07;2!UBERON:0003022;5.45e-07;2!UBERON:0005358;5.45e-07;2!UBERON:0001886;5.45e-07;2!UBERON:0002421;5.45e-07;2!UBERON:0004086;5.45e-07;2!UBERON:0002600;5.45e-07;2!UBERON:0005282;5.45e-07;2!UBERON:0005281;5.45e-07;2 | |||
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| ||
|short_description=p4@ROBO2 | |||
}} | }} |
Latest revision as of 15:59, 19 September 2015
Short description: | p4@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ROBO2_5end |
Coexpression cluster: | C4345_caudate_melanoma_merkel_smallcell_occipital_pons_amygdala |
Association with transcript: | -149bp_to_ENST00000475034_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.16e-07 | 2 |
fibroblast of choroid plexus | 9.85e-07 | 2 |