FFCP PHASE1:Hg19::chr4:185274655..185274676,-: Difference between revisions
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|id=chr4:185274655..185274676,-
|short_description=p1@LOC728175
|description=CAGE_peak_1_at_LOC728175_5end
|association_with_transcript=453bp_to_ENST00000317596,NR_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=728175 | |EntrezGene=728175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=453bp_to_ENST00000317596,NR_040108,uc003iwd.1_5end | |||
|cluster_id=chr4:185274655..185274676,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_1_at_LOC728175_5end | |||
|id=chr4:185274655..185274676,- | |||
|ontology_enrichment_celltype=CL:0000945!3.95e-29!24;CL:0000826!3.95e-29!24;CL:0000542!5.49e-17!53;CL:0000051!5.49e-17!53;CL:0000838!9.84e-15!52;CL:0000946!1.36e-07!1;CL:0000786!1.36e-07!1;CL:0000980!1.36e-07!1;CL:0002127!1.85e-07!1;CL:0000914!1.85e-07!1;CL:0000911!1.85e-07!1;CL:0000814!1.85e-07!1;CL:0002042!1.85e-07!1;CL:0002039!1.85e-07!1;CL:0002040!1.85e-07!1;CL:0002041!1.85e-07!1;CL:0000236!3.72e-07!14;CL:0002087!3.83e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.92e-68;24!CL:0000946;6.23e-18;1!CL:0000786;6.23e-18;1!CL:0002127;1.57e-17;1!CL:0000911;1.57e-17;1!CL:0000814;1.57e-17;1!CL:0000542;1.91e-15;53!CL:0002087;1.72e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-67,24;CL:0000826,1.03e-67,24;CL:0000838,1.81e-37,52;CL:0000542,9.47e-37,53;CL:0000051,9.47e-37,53;CL:0000946,6.23e-18,1;CL:0000786,6.23e-18,1;CL:0000980,6.23e-18,1;CL:0002127,1.44e-17,1;CL:0000914,1.44e-17,1;CL:0000911,1.44e-17,1;CL:0000814,1.44e-17,1;CL:0002042,1.44e-17,1;CL:0002039,1.44e-17,1;CL:0002040,1.44e-17,1;CL:0002041,1.44e-17,1;CL:0002087,2.15e-16,115;CL:0002031,1.11e-15,120;CL:0000738,9.44e-14,136;CL:0002032,1.72e-11,161;CL:0000837,1.72e-11,161;CL:0000236,3.36e-11,14;CL:0000037,5.62e-11,168;CL:0000988,2.25e-10,177;CL:0000785,1.22e-09,2;CL:0000955,1.22e-09,2;CL:0000818,1.22e-09,2;CL:0000954,1.22e-09,2;CL:0000816,1.22e-09,2;CL:0000893,1.86e-09,2;CL:0002489,1.86e-09,2;CL:0000809,1.86e-09,2;CL:0000808,1.86e-09,2;CL:0000894,1.86e-09,2;CL:0000806,1.86e-09,2;CL:0000807,1.86e-09,2;CL:0000805,1.86e-09,2;CL:0002425,1.86e-09,2;CL:0000817,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.91e-15;53!CL:0000954;1.22e-09;2!CL:0002425;1.94e-09;2 | |||
|ontology_enrichment_disease=DOID:630!1.27e-07!1;DOID:0050177!1.27e-07!1;DOID:0050427!1.27e-07!1;DOID:2355!1.54e-07!1;DOID:12603!2.84e-07!1;DOID:8552!5.84e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;5.26e-18;1!DOID:0050177;5.26e-18;1!DOID:0050427;5.26e-18;1!DOID:2355;8.72e-18;1!DOID:0060058;1.87e-15;10!DOID:74;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.26e-18,1;DOID:0050177,5.26e-18,1;DOID:0050427,5.26e-18,1;DOID:2355,8.72e-18,1;DOID:0060058,1.92e-15,10;DOID:74,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.55e-30!7;UBERON:0002106!2.23e-18!3;UBERON:0004854!2.23e-18!3;UBERON:0009034!2.23e-18!3;UBERON:0002095!2.23e-18!3;UBERON:0004782!2.23e-18!3;UBERON:0003281!2.23e-18!3;UBERON:0009664!2.23e-18!3;UBERON:0002296!2.23e-18!3;UBERON:0005602!2.23e-18!3;UBERON:0001179!2.23e-18!3;UBERON:0006293!2.23e-18!3;UBERON:0002370!7.91e-14!4;UBERON:0005058!7.91e-14!4;UBERON:0009113!7.91e-14!4;UBERON:0003295!7.91e-14!4;UBERON:0005562!7.91e-14!4;UBERON:0001042!1.33e-09!10;UBERON:0009145!1.33e-09!10;UBERON:0003351!2.19e-09!6;UBERON:0006562!9.73e-09!11;UBERON:0009722!1.08e-08!11;UBERON:0007690!1.08e-08!11;UBERON:0005057!1.22e-07!26;UBERON:0005409!3.01e-07!35;UBERON:0001154!3.02e-07!1;UBERON:0001153!3.02e-07!1;UBERON:0002372!3.21e-07!1;UBERON:0001961!3.21e-07!1;UBERON:0001744!3.21e-07!1;UBERON:0001735!3.21e-07!1;UBERON:0000945!3.38e-07!8;UBERON:0010039!3.38e-07!8;UBERON:0006834!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.14e-10,7;UBERON:0005057,2.14e-10,7;UBERON:0002106,6.88e-07,3;UBERON:0004854,6.88e-07,3;UBERON:0009034,6.88e-07,3;UBERON:0002095,6.88e-07,3;UBERON:0004782,6.88e-07,3;UBERON:0003281,6.88e-07,3;UBERON:0009664,6.88e-07,3;UBERON:0002296,6.88e-07,3;UBERON:0005602,6.88e-07,3;UBERON:0001179,6.88e-07,3;UBERON:0006293,6.88e-07,3 | |||
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|short_description=p1@LOC728175 | |||
}} | }} |
Latest revision as of 01:09, 17 September 2015
Short description: | p1@LOC728175 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC728175_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 453bp_to_ENST00000317596, NR_040108, uc003iwd.1_5end |
EntrezGene: | LOC728175 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.14e-10 | 7 |
immune organ | 2.14e-10 | 7 |
spleen | 6.88e-07 | 3 |
gastrointestinal system mesentery | 6.88e-07 | 3 |
stomach region | 6.88e-07 | 3 |
mesentery | 6.88e-07 | 3 |
gastrointestinal system serosa | 6.88e-07 | 3 |
mesentery of stomach | 6.88e-07 | 3 |
gut mesentery | 6.88e-07 | 3 |
dorsal mesentery | 6.88e-07 | 3 |
dorsal mesogastrium | 6.88e-07 | 3 |
peritoneal cavity | 6.88e-07 | 3 |
spleen primordium | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.26e-18 | 1 |
monogenic disease | 5.26e-18 | 1 |
xeroderma pigmentosum | 5.26e-18 | 1 |
anemia | 8.72e-18 | 1 |
lymphoma | 1.92e-15 | 10 |
hematopoietic system disease | 1.44e-09 | 2 |