FFCP PHASE1:Hg19::chr5:134788086..134788121,-: Difference between revisions
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|id=chr5:134788086..134788121,-
|short_description=p3@TIFAB
|description=CAGE_peak_3_at_TIFAB_5end
|association_with_transcript=0bp_to_ENST00000537858,NM_001099221,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=497189 | |EntrezGene=497189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34024 | |HGNC=34024 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZNK6 | |UniProt=Q6ZNK6 | ||
|association_with_transcript=0bp_to_ENST00000537858,NM_001099221,uc003law.3_5end | |||
|cluster_id=chr5:134788086..134788121,- | |||
|coexpression_cluster_id=C488 | |||
|description=CAGE_peak_3_at_TIFAB_5end | |||
|id=chr5:134788086..134788121,- | |||
|ontology_enrichment_celltype=CL:0000763!3.49e-31!112;CL:0000049!3.49e-31!112;CL:0000037!1.91e-27!172;CL:0000566!1.91e-27!172;CL:0000988!3.93e-25!182;CL:0002009!1.96e-24!65;CL:0002032!1.00e-23!165;CL:0000837!1.00e-23!165;CL:0002194!2.00e-23!63;CL:0000576!2.00e-23!63;CL:0000040!2.00e-23!63;CL:0000559!2.00e-23!63;CL:0000557!2.87e-23!71;CL:0000766!1.42e-22!76;CL:0000839!7.63e-22!70;CL:0000738!1.25e-21!140;CL:0000451!5.85e-18!10;CL:0002031!2.04e-15!124;CL:0002087!2.80e-15!119;CL:0000990!1.78e-13!8;CL:0000784!8.04e-09!3;CL:0000453!1.23e-08!5;CL:0002619!1.23e-08!3;CL:0000235!1.29e-08!10;CL:0000840!3.25e-07!5;CL:0001029!3.25e-07!5;CL:0000134!4.16e-07!358;CL:0002057!4.25e-07!42;CL:0002320!9.96e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000451;1.71e-46;10!CL:0000990;1.77e-34;8!CL:0000453;5.94e-21;5!CL:0000784;9.99e-21;3!CL:0002619;3.38e-20;3!CL:0000840;1.19e-17;5!CL:0000235;1.04e-10;6!CL:0000037;1.35e-07;1!CL:0001024;1.35e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,2.70e-46,10;CL:0000990,2.73e-34,8;CL:0000763,2.64e-22,108;CL:0000049,2.64e-22,108;CL:0000453,7.13e-21,5;CL:0000784,1.03e-20,3;CL:0002619,3.17e-20,3;CL:0000037,1.03e-17,168;CL:0000840,1.52e-17,5;CL:0001029,1.52e-17,5;CL:0000988,1.40e-16,177;CL:0002032,1.26e-13,161;CL:0000837,1.26e-13,161;CL:0002009,6.92e-13,61;CL:0000557,1.50e-11,67;CL:0002194,3.63e-11,59;CL:0000576,3.63e-11,59;CL:0000040,3.63e-11,59;CL:0000559,3.63e-11,59;CL:0000235,1.04e-10,6;CL:0000738,2.69e-10,136;CL:0000839,8.58e-10,66;CL:0000766,7.94e-09,72;CL:0001024,9.72e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000049;2.07e-08;108!UBERON:0001045;1.35e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!5.05e-09!31;DOID:1240!8.86e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.37e-12;31!DOID:225;1.35e-07;1!DOID:1240;2.72e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.67e-12,31;DOID:1240,1.06e-09,39;DOID:225,1.64e-07,1;DOID:2531,3.81e-07,51;DOID:0060083,3.81e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-25!102;UBERON:0003061!1.17e-25!102;UBERON:0002193!1.88e-25!112;UBERON:0002405!9.80e-22!115;UBERON:0002371!2.36e-21!80;UBERON:0001474!2.97e-19!86;UBERON:0004765!4.05e-15!101;UBERON:0001434!4.05e-15!101;UBERON:0003081!2.91e-09!216;UBERON:0004177!9.40e-08!7;UBERON:0002204!3.07e-07!167;UBERON:0002106!6.18e-07!3;UBERON:0004854!6.18e-07!3;UBERON:0009034!6.18e-07!3;UBERON:0002095!6.18e-07!3;UBERON:0004782!6.18e-07!3;UBERON:0003281!6.18e-07!3;UBERON:0009664!6.18e-07!3;UBERON:0002296!6.18e-07!3;UBERON:0005602!6.18e-07!3;UBERON:0001179!6.18e-07!3;UBERON:0006293!6.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.35e-07;1!UBERON:0001154;1.35e-07;1!UBERON:0001153;1.35e-07;1!UBERON:0009854;1.35e-07;1!UBERON:0001961;1.35e-07;1!UBERON:0001744;1.35e-07;1!UBERON:0001042;1.35e-07;1!UBERON:0001735;1.35e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.05e-12,76;UBERON:0002405,8.71e-11,93;UBERON:0001474,9.71e-11,82;UBERON:0004765,1.41e-09,90;UBERON:0002193,6.26e-09,108;UBERON:0002390,1.32e-08,98;UBERON:0003061,1.32e-08,98;UBERON:0001434,2.19e-08,100;UBERON:0002372,1.04e-07,1;UBERON:0001961,1.04e-07,1;UBERON:0001744,1.04e-07,1;UBERON:0001735,1.04e-07,1;UBERON:0001154,1.54e-07,1;UBERON:0001153,1.54e-07,1;UBERON:0001045,1.54e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,1.76160263600908,0.553995408531877,0.200544447470142,0,1.56740831967947,4.85840499028469,2.06060454107349,0.290796477559129,0,0.485168122375632,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0447784237956,2.26028532882071,4.76981248610684,4.0039643754609,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.51579964002488,14.7583757638122,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0.962479855263359,0,0,0,0,0,0,0.383010740264733,0,0,0,12.5529073468256,0,0,0,4.81764225311099,38.5437440734901,2.98092366383228,1.03051603426729,0.921722292925374,2.01308497103174,1.66849141711908,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0.123084805461069,0,0,0,34.7869211754273,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,2.249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72804432375144,1.0629187225069,2.12635012532597,0,0,0,0,1.06691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,0,0,0,0,0.0939839179798536,0.644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.775066918032073,0.434523000071005,0,0,0.202117188958219,0.217716747896961,0,1.68380132536469,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p3@TIFAB | |||
}} | }} |
Latest revision as of 18:20, 24 September 2015
Short description: | p3@TIFAB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TIFAB_5end |
Coexpression cluster: | C488_biphenotypic_acute_skeletal_hippocampus_Monocytederived_diaphragm_small |
Association with transcript: | 0bp_to_ENST00000537858, NM_001099221, uc003law.3_5end |
EntrezGene: | TIFAB |
HGNC: | 34024 |
UniProt: | Q6ZNK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 2.70e-46 | 10 |
conventional dendritic cell | 2.73e-34 | 8 |
myeloid cell | 2.64e-22 | 108 |
common myeloid progenitor | 2.64e-22 | 108 |
Langerhans cell | 7.13e-21 | 5 |
plasmacytoid dendritic cell | 1.03e-20 | 3 |
adult endothelial progenitor cell | 3.17e-20 | 3 |
hematopoietic stem cell | 1.03e-17 | 168 |
immature conventional dendritic cell | 1.52e-17 | 5 |
common dendritic progenitor | 1.52e-17 | 5 |
hematopoietic cell | 1.40e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.26e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.26e-13 | 161 |
macrophage dendritic cell progenitor | 6.92e-13 | 61 |
granulocyte monocyte progenitor cell | 1.50e-11 | 67 |
monopoietic cell | 3.63e-11 | 59 |
monocyte | 3.63e-11 | 59 |
monoblast | 3.63e-11 | 59 |
promonocyte | 3.63e-11 | 59 |
macrophage | 1.04e-10 | 6 |
leukocyte | 2.69e-10 | 136 |
myeloid lineage restricted progenitor cell | 8.58e-10 | 66 |
myeloid leukocyte | 7.94e-09 | 72 |
CD34-positive, CD38-negative hematopoietic stem cell | 9.72e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.05e-12 | 76 |
immune system | 8.71e-11 | 93 |
bone element | 9.71e-11 | 82 |
skeletal element | 1.41e-09 | 90 |
hemolymphoid system | 6.26e-09 | 108 |
hematopoietic system | 1.32e-08 | 98 |
blood island | 1.32e-08 | 98 |
skeletal system | 2.19e-08 | 100 |
tonsil | 1.04e-07 | 1 |
mucosa-associated lymphoid tissue | 1.04e-07 | 1 |
lymphoid tissue | 1.04e-07 | 1 |
tonsillar ring | 1.04e-07 | 1 |
vermiform appendix | 1.54e-07 | 1 |
caecum | 1.54e-07 | 1 |
midgut | 1.54e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.67e-12 | 31 |
leukemia | 1.06e-09 | 39 |
syndrome | 1.64e-07 | 1 |
hematologic cancer | 3.81e-07 | 51 |
immune system cancer | 3.81e-07 | 51 |