FFCP PHASE1:Hg19::chr5:141337686..141337697,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:141337686..141337697,-
|short_description=p2@PCDH12
|description=CAGE_peak_2_at_PCDH12_5end
|association_with_transcript=-9bp_to_BC042634_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51294 | |EntrezGene=51294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8657 | |HGNC=8657 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUP8 | |UniProt=Q8IUP8 | ||
|association_with_transcript=-9bp_to_BC042634_5end | |||
|cluster_id=chr5:141337686..141337697,- | |||
|coexpression_cluster_id=C4469 | |||
|description=CAGE_peak_2_at_PCDH12_5end | |||
|id=chr5:141337686..141337697,- | |||
|ontology_enrichment_celltype=CL:0002139!4.91e-36!24;CL:0000115!1.00e-27!35;CL:0000071!1.61e-27!18;CL:0002546!1.61e-27!18;CL:1000413!1.45e-21!9;CL:0002078!1.18e-20!44;CL:0002544!5.37e-15!6;CL:0000213!1.89e-14!57;CL:0000215!1.89e-14!57;CL:0005020!4.97e-10!6;CL:0002138!4.97e-10!6;CL:0005022!4.97e-10!6;CL:0002618!3.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-68;24!CL:0000071;6.41e-54;18!CL:1000413;2.54e-52;9!CL:0000115;5.84e-45;36!CL:0002544;1.13e-35;6!CL:0002078;4.28e-28;45!CL:0000213;2.05e-17;58!CL:0000215;2.05e-17;58!CL:0002138;3.41e-16;6!CL:0002545;3.66e-13;2!CL:0002144;2.00e-09;3!CL:0000076;3.41e-09;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.28e-69,24;CL:0000071,1.40e-54,18;CL:0002546,1.40e-54,18;CL:1000413,1.83e-53,9;CL:0000115,2.36e-50,36;CL:0002078,1.60e-39,45;CL:0002544,2.45e-36,6;CL:0000213,8.36e-30,58;CL:0000215,8.36e-30,58;CL:0005020,4.51e-16,6;CL:0002138,4.51e-16,6;CL:0005022,4.51e-16,6;CL:0000076,1.04e-13,63;CL:0002545,2.00e-13,2;CL:0000222,2.69e-12,121;CL:0002144,2.05e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002546;6.41e-54;18!CL:0005022;3.41e-16;6!UBERON:0004872;1.09e-13;7!UBERON:0003124;3.96e-07;1!UBERON:0010226;3.96e-07;1!UBERON:0004140;3.96e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@PCDH12 | |||
}} | }} |
Latest revision as of 05:31, 25 September 2015
Short description: | p2@PCDH12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCDH12_5end |
Coexpression cluster: | C4469_Endothelial_lung_spleen_placenta_Hepatic_adipose_skeletal |
Association with transcript: | -9bp_to_BC042634_5end |
EntrezGene: | PCDH12 |
HGNC: | 8657 |
UniProt: | Q8IUP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.28e-69 | 24 |
blood vessel endothelial cell | 1.40e-54 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.40e-54 | 18 |
endothelial cell of artery | 1.83e-53 | 9 |
endothelial cell | 2.36e-50 | 36 |
meso-epithelial cell | 1.60e-39 | 45 |
aortic endothelial cell | 2.45e-36 | 6 |
lining cell | 8.36e-30 | 58 |
barrier cell | 8.36e-30 | 58 |
lymphangioblast | 4.51e-16 | 6 |
endothelial cell of lymphatic vessel | 4.51e-16 | 6 |
vascular lymphangioblast | 4.51e-16 | 6 |
squamous epithelial cell | 1.04e-13 | 63 |
thoracic aorta endothelial cell | 2.00e-13 | 2 |
mesodermal cell | 2.69e-12 | 121 |
capillary endothelial cell | 2.05e-09 | 3 |