FFCP PHASE1:Hg19::chr5:59064162..59064173,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:59064162..59064173,-
|short_description=p72@PDE4D
|description=CAGE_peak_72_at_PDE4D_5end
|association_with_transcript=271bp_to_uc003jry.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=271bp_to_uc003jry.2_5end | |||
|cluster_id=chr5:59064162..59064173,- | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_72_at_PDE4D_5end | |||
|id=chr5:59064162..59064173,- | |||
|ontology_enrichment_celltype=CL:0002076!3.79e-18!43;CL:0002251!4.27e-16!21;CL:0000223!5.65e-14!59;CL:0002621!1.75e-12!3;CL:0000575!3.94e-09!2;CL:0000622!1.09e-07!5;CL:0002159!3.17e-07!13;CL:0000066!4.33e-07!254;CL:0000150!4.79e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000575;5.96e-34;2!CL:0002621;3.66e-23;3!CL:0002076;6.09e-10;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,5.04e-34,2;CL:0002621,4.09e-23,3;CL:0002076,2.10e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!1.94e-16!21;UBERON:0000161!2.79e-15!35;UBERON:0000165!3.63e-14!28;UBERON:0000930!3.63e-14!28;UBERON:0001004!7.89e-14!72;UBERON:0004119!5.45e-13!169;UBERON:0000925!5.45e-13!169;UBERON:0006595!5.45e-13!169;UBERON:0001949!1.75e-12!3;UBERON:0003729!4.27e-12!5;UBERON:0000344!1.19e-10!12;UBERON:0001444!1.47e-10!48;UBERON:0001007!1.87e-09!155;UBERON:0001555!1.87e-09!155;UBERON:0007026!1.87e-09!155;UBERON:0003343!3.31e-09!4;UBERON:0004785!3.31e-09!4;UBERON:0000974!4.42e-09!10;UBERON:0003102!1.82e-08!95;UBERON:0006562!6.48e-08!11;UBERON:0000065!3.40e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;3.66e-23;3!UBERON:0000964;9.45e-18;4!UBERON:0010409;9.45e-18;4!UBERON:0003929;9.43e-11;7!UBERON:0003350;1.41e-09;8!UBERON:0001828;1.41e-09;8!UBERON:0010313;6.34e-08;10!UBERON:0000486;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.09e-23,3;UBERON:0000964,8.69e-18,4;UBERON:0010409,8.69e-18,4;UBERON:0004348,8.69e-18,4;UBERON:0005427,8.69e-18,4;UBERON:0003350,1.47e-09,8;UBERON:0001828,1.47e-09,8;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10 | |||
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| ||
|short_description=p72@PDE4D | |||
}} | }} |
Latest revision as of 07:54, 18 September 2015
Short description: | p72@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_72_at_PDE4D_5end |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | 271bp_to_uc003jry.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 5.04e-34 | 2 |
gingival epithelial cell | 4.09e-23 | 3 |
endo-epithelial cell | 2.10e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.09e-23 | 3 |
cornea | 8.69e-18 | 4 |
eye surface | 8.69e-18 | 4 |
optic eminence | 8.69e-18 | 4 |
corneal primordium | 8.69e-18 | 4 |
epithelium of mucosa | 1.47e-09 | 8 |
gingiva | 1.47e-09 | 8 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |