FFCP PHASE1:Hg19::chr5:59481438..59481445,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:59481438..59481445,-
|short_description=p70@PDE4D
|description=CAGE_peak_70_at_PDE4D_5end
|association_with_transcript=-13bp_to_ENST00000546160_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000546160_5end | |||
|cluster_id=chr5:59481438..59481445,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_70_at_PDE4D_5end | |||
|id=chr5:59481438..59481445,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-21;29!UBERON:0001041;8.88e-21;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.06e-24!57;UBERON:0005068!4.06e-24!57;UBERON:0006241!4.06e-24!57;UBERON:0007135!4.06e-24!57;UBERON:0001017!8.65e-22!82;UBERON:0005743!1.75e-20!86;UBERON:0000955!1.94e-20!69;UBERON:0006238!1.94e-20!69;UBERON:0007023!7.48e-20!115;UBERON:0002616!1.16e-18!59;UBERON:0000073!6.02e-18!94;UBERON:0001016!6.02e-18!94;UBERON:0002791!7.40e-18!33;UBERON:0002020!1.66e-17!34;UBERON:0003528!1.66e-17!34;UBERON:0002420!2.93e-17!9;UBERON:0007245!2.93e-17!9;UBERON:0010009!2.93e-17!9;UBERON:0010011!2.93e-17!9;UBERON:0000454!2.93e-17!9;UBERON:0001893!3.03e-17!34;UBERON:0002780!5.49e-16!41;UBERON:0001890!5.49e-16!41;UBERON:0006240!5.49e-16!41;UBERON:0003080!1.59e-15!42;UBERON:0003075!3.84e-14!86;UBERON:0007284!3.84e-14!86;UBERON:0001869!9.64e-14!32;UBERON:0002346!2.84e-13!90;UBERON:0002308!7.68e-13!9;UBERON:0000125!7.68e-13!9;UBERON:0009663!1.42e-11!7;UBERON:0000349!7.94e-11!5;UBERON:0001871!3.02e-10!7;UBERON:0003076!3.66e-10!15;UBERON:0003057!3.66e-10!15;UBERON:0002619!7.50e-10!22;UBERON:0003056!1.24e-09!61;UBERON:0000153!2.12e-09!129;UBERON:0007811!2.12e-09!129;UBERON:0000033!4.31e-09!123;UBERON:0004121!6.39e-09!169;UBERON:0000025!9.09e-09!194;UBERON:0001950!1.17e-08!20;UBERON:0000924!1.44e-08!173;UBERON:0006601!1.44e-08!173;UBERON:0000956!1.57e-08!25;UBERON:0000203!1.57e-08!25;UBERON:0000369!5.53e-08!4;UBERON:0002435!5.53e-08!4;UBERON:0000204!5.53e-08!4;UBERON:0010082!5.53e-08!4;UBERON:0001876!7.11e-08!2;UBERON:0004111!1.18e-07!241;UBERON:0003127!1.71e-07!2;UBERON:0002298!7.49e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.23e-66;1!UBERON:0006518;1.23e-66;1!UBERON:0008949;1.23e-66;1!UBERON:0000101;1.23e-66;1!UBERON:0002167;1.23e-66;1!UBERON:0002048;7.08e-28;22!UBERON:0000117;7.08e-28;22!UBERON:0000171;7.08e-28;22!UBERON:0000170;7.08e-28;22!UBERON:0005178;1.93e-16;34!UBERON:0002224;1.93e-16;34!UBERON:0000065;3.44e-13;44!UBERON:0005181;5.68e-13;35!UBERON:0000915;6.72e-10;52!UBERON:0001004;7.38e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.23e-66,1;UBERON:0006518,1.23e-66,1;UBERON:0008949,1.23e-66,1;UBERON:0000101,1.23e-66,1;UBERON:0002167,1.23e-66,1;UBERON:0002048,7.08e-28,22;UBERON:0000117,7.08e-28,22;UBERON:0000171,7.08e-28,22;UBERON:0000170,7.08e-28,22;UBERON:0005597,7.08e-28,22;UBERON:0000118,7.08e-28,22;UBERON:0005178,1.78e-18,34;UBERON:0002224,1.78e-18,34;UBERON:0005181,5.55e-18,35;UBERON:0005153,4.49e-17,37;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0005157,1.10e-13,47;UBERON:0000915,1.77e-12,52;UBERON:0000065,4.68e-12,54;UBERON:0001004,4.40e-09,74;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
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| ||
|short_description=p70@PDE4D | |||
}} | }} |
Latest revision as of 08:06, 18 September 2015
Short description: | p70@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_70_at_PDE4D_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -13bp_to_ENST00000546160_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.23e-66 | 1 |
right lung lobe | 1.23e-66 | 1 |
lower lobe of lung | 1.23e-66 | 1 |
lobe of lung | 1.23e-66 | 1 |
right lung | 1.23e-66 | 1 |
lung | 7.08e-28 | 22 |
respiratory tube | 7.08e-28 | 22 |
respiration organ | 7.08e-28 | 22 |
pair of lungs | 7.08e-28 | 22 |
lung primordium | 7.08e-28 | 22 |
lung bud | 7.08e-28 | 22 |
thoracic cavity element | 1.78e-18 | 34 |
thoracic cavity | 1.78e-18 | 34 |
thoracic segment organ | 5.55e-18 | 35 |
epithelial bud | 4.49e-17 | 37 |
respiratory primordium | 1.18e-16 | 38 |
endoderm of foregut | 1.18e-16 | 38 |
epithelial fold | 1.10e-13 | 47 |
thoracic segment of trunk | 1.77e-12 | 52 |
respiratory tract | 4.68e-12 | 54 |
respiratory system | 4.40e-09 | 74 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |