UBERON:0002012: Difference between revisions
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|has_quality= | |has_quality= | ||
|id=UBERON:0002012 | |id=UBERON:0002012 | ||
|is_a=UBERON: | |is_a=UBERON:0000077 ;;UBERON:0001637 ;;UBERON:0010314 ;;UBERON:0013768 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=pulmonary artery | |name=pulmonary artery | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0008886 | |part_of=UBERON:0008886 | ||
Latest revision as of 17:24, 12 September 2014
| Name: | pulmonary artery | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The pulmonary arteries carry blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood. In the human heart, the pulmonary trunk (pulmonary artery or main pulmonary artery) begins at the base of the right ventricle. It is short and wide - approximately 5 cm (2 inches) in length and 3 cm (1.2 inches) in diameter. It then branches into two pulmonary arteries (left and right), which deliver deoxygenated blood to the corresponding lung. [WP,unvetted]." [Wikipedia:Pulmonary_artery] | ||
| Xrefs: |
| ||
| Synonyms: |
"pulmonary arterial tree" EXACT [] "pulmonary arterial tree organ part" EXACT [] "truncus pulmonalis, arteria pulmonalis" RELATED LATIN [Wikipedia:Pulmonary_artery] | ||
| Alt_id: | UBERON:FMA_66326-MA_0002031 | ||
| Subset: | uberon_slim |
200px-Alveoli_diagram.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000077(mixed endoderm/mesoderm-derived structure),UBERON:0001637(artery),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0013768(great vessel of heart) |
|---|---|
| develops_from: | UBERON:0002061(truncus arteriosus) |
| part_of: | UBERON:0008886(pulmonary vascular system) |
Children
| part of: | CL:0002557 (fibroblast of pulmonary artery),CL:0002591 (smooth muscle cell of the pulmonary artery) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
- 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
- 11365-117I6 (Smooth Muscle Cells - Pulmonary Artery, donor2)
- 11437-118H6 (Smooth Muscle Cells - Pulmonary Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002012 (pulmonary artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_39166e6fcea678fdd61cb3a75bda0450 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_39166e6fcea678fdd61cb3a75bda0450 | p@chr8:90366581..90366594, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_39166e6fcea678fdd61cb3a75bda0450 | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_39166e6fcea678fdd61cb3a75bda0450 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_39166e6fcea678fdd61cb3a75bda0450 | p@chr8:90366581..90366594, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_39166e6fcea678fdd61cb3a75bda0450 | p@chr6:21648948..21648949, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_7e4ca4c57055178b54732f10303bfc7a | p@chr4:70707556..70707558, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_7e4ca4c57055178b54732f10303bfc7a | p@chr4:70707556..70707558, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_e2c87e2c433f03be9d3d850e4323295d | p14@FAS |
| 4.52e-50 | FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_e2c87e2c433f03be9d3d850e4323295d | p26@LINC00340 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_e2c87e2c433f03be9d3d850e4323295d | p@chr3:158928407..158928414, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_e2c87e2c433f03be9d3d850e4323295d | p@chrX:23072856..23072859, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_e2c87e2c433f03be9d3d850e4323295d | p@chr8:120651826..120651840, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_e2c87e2c433f03be9d3d850e4323295d | p14@FAS |
| 4.52e-50 | FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_e2c87e2c433f03be9d3d850e4323295d | p26@LINC00340 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_e2c87e2c433f03be9d3d850e4323295d | p@chr8:120651826..120651840, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_e2c87e2c433f03be9d3d850e4323295d | p@chr3:158928407..158928414, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_e2c87e2c433f03be9d3d850e4323295d | p@chrX:23072856..23072859, - |
| 3.61e-34 | FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_a76785a60288b619ce30b9561177386f | p@chr4:70707608..70707615, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_a76785a60288b619ce30b9561177386f | p@chr4:70707608..70707615, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_2357f32dada311498c02c2341453ae26 | p@chr3:156258392..156258395, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_2357f32dada311498c02c2341453ae26 | p@chr4:70690584..70690589, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_2357f32dada311498c02c2341453ae26 | p@chr11:131614903..131614910, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_2357f32dada311498c02c2341453ae26 | p@chr17:76824975..76824978, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_2357f32dada311498c02c2341453ae26 | p@chr3:156258392..156258395, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_2357f32dada311498c02c2341453ae26 | p@chr4:70690584..70690589, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_2357f32dada311498c02c2341453ae26 | p@chr17:76824975..76824978, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_2357f32dada311498c02c2341453ae26 | p@chr11:131614903..131614910, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p1@CACNG8 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr1:176668544..176668553, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr4:38147484..38147500, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr1:93043102..93043113, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p19@AMOTL1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p1@ENST00000406333 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr7:18834859..18834879, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p13@PTGIS |
| 7.05e-34 | FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr4:24645959..24645967, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chrX:140904171..140904173, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr8:134047162..134047169, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr9:16059821..16059828, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr13:38136724..38136726, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr7:22687639..22687644, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p1@CACNG8 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr1:176668544..176668553, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p19@AMOTL1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr13:38136724..38136726, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr1:93043102..93043113, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr7:18834859..18834879, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr4:38147484..38147500, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chrX:140904171..140904173, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr8:134047162..134047169, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p1@ENST00000406333 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr9:16059821..16059828, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_a780bda9d3c1dabe4f4bde7f3b93e03b | p13@PTGIS |
| 7.05e-34 | FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr4:24645959..24645967, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_a780bda9d3c1dabe4f4bde7f3b93e03b | p@chr7:22687639..22687644, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_3ff2836798c3130790cced7fb137908f | p@chr9:33797893..33797903, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_3ff2836798c3130790cced7fb137908f | p@chr9:33797893..33797903, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr8:123580995..123581003, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr4:891819..891820,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr4:891819..891820, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_c7edb653556cd89ff2a951cd67ca6b0e | p1@SNORD105 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr17:61995172..61995199, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr18:65175930..65175941, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_c7edb653556cd89ff2a951cd67ca6b0e | p13@RAB11FIP5 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr19:15509437..15509442, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_c7edb653556cd89ff2a951cd67ca6b0e | p16@HMGA1 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_c7edb653556cd89ff2a951cd67ca6b0e | p1@ENST00000492301 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr4:891819..891820,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr4:891819..891820, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_c7edb653556cd89ff2a951cd67ca6b0e | p1@SNORD105 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr8:123580995..123581003, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_c7edb653556cd89ff2a951cd67ca6b0e | p1@ENST00000492301 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_c7edb653556cd89ff2a951cd67ca6b0e | p16@HMGA1 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr17:61995172..61995199, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr18:65175930..65175941, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_c7edb653556cd89ff2a951cd67ca6b0e | p13@RAB11FIP5 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_c7edb653556cd89ff2a951cd67ca6b0e | p@chr19:15509437..15509442, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr6:148593641..148593643, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr9:33797981..33798005, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr3:11675748..11675759, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr5:146890197..146890224, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_1d8cac6c221d09713bad3a7e6a02b38c | p1@ENST00000521989 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_1d8cac6c221d09713bad3a7e6a02b38c | p28@ANK2 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr15:71371688..71371691, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_1d8cac6c221d09713bad3a7e6a02b38c | p5@BC031228 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr4:74392579..74392583, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_1d8cac6c221d09713bad3a7e6a02b38c | p10@FAM92A1 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr2:84316409..84316414, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr19:681941..681952,+#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr19:681941..681952, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr15:71371688..71371691,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr15:71371688..71371691, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr6:148593641..148593643, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr2:238116338..238116342, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr1:185703364..185703371, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr9:33797981..33798005, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_1d8cac6c221d09713bad3a7e6a02b38c | p5@BC031228 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_1d8cac6c221d09713bad3a7e6a02b38c | p1@ENST00000521989 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr4:74392579..74392583, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr2:84316409..84316414, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr3:11675748..11675759,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr3:11675748..11675759, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_1d8cac6c221d09713bad3a7e6a02b38c | p@chr5:146890197..146890224, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr4:114257151..114257163,+#_1d8cac6c221d09713bad3a7e6a02b38c | p28@ANK2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Major artery which supplies blood to the lungs.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
