FFCP PHASE1:Hg19::chr6:11538902..11538907,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:11538902..11538907,-
|short_description=p@chr6:11538902..11538907,-
|description=CAGE_peak_at_chr6:11538902..11538907,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:11538902..11538907,- | |||
|coexpression_cluster_id=C4548 | |||
|description=CAGE_peak_at_chr6:11538902..11538907,- | |||
|id=chr6:11538902..11538907,- | |||
|ontology_enrichment_celltype=CL:0002057!2.31e-45!42;CL:0000860!2.51e-41!45;CL:0000037!5.03e-38!172;CL:0000566!5.03e-38!172;CL:0000766!3.10e-36!76;CL:0000738!4.20e-36!140;CL:0000988!2.13e-34!182;CL:0000763!7.08e-32!112;CL:0000049!7.08e-32!112;CL:0002032!1.29e-31!165;CL:0000837!1.29e-31!165;CL:0000557!1.38e-30!71;CL:0002194!1.34e-29!63;CL:0000576!1.34e-29!63;CL:0000040!1.34e-29!63;CL:0000559!1.34e-29!63;CL:0000839!1.61e-29!70;CL:0002087!1.02e-28!119;CL:0002009!3.08e-28!65;CL:0002031!2.55e-25!124;CL:0002393!4.02e-13!9;CL:0002397!4.02e-13!9;CL:0000219!2.75e-09!390;CL:0000134!4.84e-09!358;CL:0002320!2.00e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.65e-38;33!CL:0002057;5.65e-38;33!CL:0000576;6.46e-35;48!CL:0000473;3.97e-31;39!CL:0000234;3.97e-31;39!CL:0002393;1.23e-27;6!CL:0002397;1.23e-27;6!CL:0000766;6.06e-27;69!CL:0000784;1.48e-15;3!CL:0000767;1.21e-14;3!CL:0000763;3.81e-12;100!CL:0000094;1.49e-09;8!CL:0000738;2.36e-09;136!CL:0002087;4.94e-09;104!CL:0000226;5.04e-07;3!CL:0000842;5.04e-07;3!CL:0000081;5.85e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.76e-63,42;CL:0002057,2.76e-63,42;CL:0000473,3.45e-59,48;CL:0000234,3.45e-59,48;CL:0000766,2.11e-54,72;CL:0002194,3.80e-50,59;CL:0000576,3.80e-50,59;CL:0000040,3.80e-50,59;CL:0000559,3.80e-50,59;CL:0002009,2.51e-48,61;CL:0000557,5.85e-47,67;CL:0000839,2.98e-44,66;CL:0000738,2.75e-41,136;CL:0000763,2.91e-39,108;CL:0000049,2.91e-39,108;CL:0000037,4.11e-36,168;CL:0000988,6.96e-34,177;CL:0002087,2.77e-31,115;CL:0002032,1.51e-27,161;CL:0000837,1.51e-27,161;CL:0002031,1.80e-25,120;CL:0002393,2.56e-24,9;CL:0002397,2.56e-24,9;CL:0000784,1.38e-15,3;CL:0000767,6.31e-15,3;CL:0000134,6.49e-14,354;CL:0002320,1.74e-13,361;CL:0000219,5.69e-12,386;CL:0000034,2.41e-10,441;CL:0000048,4.06e-10,427;CL:0000723,7.32e-10,433;CL:0000094,1.03e-09,8;CL:0000081,4.50e-07,11;CL:0000226,5.12e-07,3;CL:0000842,5.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.51e-43;42!CL:0000049;8.40e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.24e-27!102;UBERON:0003061!9.24e-27!102;UBERON:0002371!1.16e-26!80;UBERON:0001474!7.95e-26!86;UBERON:0002193!9.46e-23!112;UBERON:0004765!1.33e-19!101;UBERON:0001434!1.33e-19!101;UBERON:0002405!2.94e-17!115;UBERON:0003081!6.82e-08!216;UBERON:0002204!8.89e-08!167;UBERON:0002384!1.33e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.02e-40,76;UBERON:0001474,2.64e-37,82;UBERON:0002390,2.77e-35,98;UBERON:0003061,2.77e-35,98;UBERON:0004765,1.86e-33,90;UBERON:0002405,3.49e-32,93;UBERON:0002193,2.02e-31,108;UBERON:0001434,1.66e-29,100;UBERON:0002204,3.49e-15,167;UBERON:0003081,1.22e-13,203;UBERON:0002384,6.72e-13,371 | |||
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| ||
|short_description=p@chr6:11538902..11538907,- | |||
}} | }} |
Latest revision as of 18:35, 30 July 2015
Short description: | p@chr6:11538902..11538907, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:11538902..11538907, - |
Coexpression cluster: | C4548_CD14_Neutrophils_Basophils_granulocyte_Dendritic_Eosinophils_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.02e-40 | 76 |
bone element | 2.64e-37 | 82 |
hematopoietic system | 2.77e-35 | 98 |
blood island | 2.77e-35 | 98 |
skeletal element | 1.86e-33 | 90 |
immune system | 3.49e-32 | 93 |
hemolymphoid system | 2.02e-31 | 108 |
skeletal system | 1.66e-29 | 100 |
musculoskeletal system | 3.49e-15 | 167 |
lateral plate mesoderm | 1.22e-13 | 203 |
connective tissue | 6.72e-13 | 371 |