NonredundantMotifs:101: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=-
|motif_cluster_2013_march_motif_members= /UNIPROBE:Cphx_3484.1;CELL08~Gata3_secondary;SCI09
|name=known101
|representative_motif_db=UNIPRO...") |
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{{Known_motif | {{Known_motif | ||
|entrez_gene_id= | |PWM=P0;A;C;G;T!1;0.337348763931314;0.184522380190307;0.262763023816345;0.215365832062034!2;0.0307045589135245;0.00498477891086687;0.00485925792365284;0.959451404251956!3;0.0392084187728609;0.0161169589973361;0.932630043250018;0.0120445789797855!4;0.975773367905234;0.00665679387059839;0.00652405844011646;0.0110457797840511!5;0.0357412803981999;0.00406052770265754;0.0567257862875699;0.903472405611573!6;0.0995237853269365;0.371013880789135;0.287587668055301;0.241874665828627!7;0.219255204328639;0.280760646934647;0.34893745448659;0.151046694250123!8;0.537665593588842;0.343744008792147;0.0790097923855718;0.0395806052334391!9;0.954765462309922;0.0267057777792129;0.00699511500673706;0.0115336449041277!10;0.00684249913400434;0.00511610254740389;0.00278032130374862;0.985261077014843!11;0.00404334800563113;0.971830472839378;0.00306225988934399;0.0210639192656466!12;0.947882429181939;0.0141921962457856;0.00786494602712621;0.0300604285451496!13;0.610545454704323;0.140112698063264;0.148523081693134;0.10081876553928!14;0.356890543286946;0.207960824082546;0.104885321568421;0.330263311062087 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Cphx_3484.1;CELL08 | |entrez_gene_id=502042 | ||
|name= | |motif_cluster_2013_march_motif_members= /UNIPROBE:Gata3_secondary;SCI09~Cphx_3484.1;CELL08 | ||
|name=non-redundant101 | |||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Cphx_3484.1 | |representative_motif_id=Cphx_3484.1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 16:11, 31 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant101
- db :UNIPROBE
- Id :Cphx_3484.1
- name :CELL08
- score :0.06620958371606205
- External refs:
- Internal refs:
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Sub Motif Members
