NonredundantMotifs:106: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=1870
|motif_cluster_2013_march_motif_members= /UNIPROBE:E2F2_secondary;SCI09~E2F3_secondary;SCI09
|name=known106
|representative_motif_db=UN...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.2704401466472;0.280854563996597;0.182253932648463;0.26645135670774!2;0.232293824553287;0.286576741921589;0.287021989443211;0.194107444081914!3;0.182718648811551;0.289523645691666;0.187726474522759;0.340031230974024!4;0.32166754059233;0.055383382227865;0.129604184540657;0.493344892639148!5;0.10597094035225;0.476988758749163;0.00758013285624535;0.409460168042342!6;0.150172027245697;0.0137013551586514;0.803513011961375;0.0326136056342759!7;0.00455868116379531;0.194378164390001;0.794740729905578;0.00632242454062528!8;0.0478433508373583;0.942269228692923;0.00591760599925775;0.00396981447046127!9;0.0100887630152823;0.00258398875110373;0.946109395733224;0.0412178525003898!10;0.0122764128374067;0.865373489580184;0.117935353488399;0.00441474409401017!11;0.0459118414331594;0.779219643705453;0.00693541655777782;0.16793309830361!12;0.781965072328259;0.0116227134053222;0.113119353501702;0.0932928607647172!13;0.612968274487541;0.172164479748871;0.0960610539237365;0.118806191839851!14;0.357204303460633;0.206996637451201;0.222456402337992;0.213342656750174!15;0.292059187528468;0.261101052111441;0.279673741850398;0.167166018509692!16;0.164667144585506;0.173227022291254;0.371882348834686;0.290223484288554!17;0.157764910641177;0.278892432486016;0.333118716726286;0.230223940146521 | |||
|entrez_gene_id=1870 | |entrez_gene_id=1870 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE: | |motif_cluster_2013_march_motif_members= /UNIPROBE:E2F3_secondary;SCI09~E2F2_secondary;SCI09 | ||
|name= | |name=non-redundant106 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=E2F2_secondary | |representative_motif_id=E2F2_secondary | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant106
- db :UNIPROBE
- Id :E2F2_secondary
- name :SCI09
- score :1.8769964180688634
- External refs:
- Internal refs:
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Sub Motif Members
