NonredundantMotifs:127: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=6672
|motif_cluster_2013_march_motif_members= /UNIPROBE:IRC900814_primary;SCI09~Sp100_primary;SCI09
|name=known127
|representative_motif_db=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.39873852495618;0.130866834931474;0.338755578079987;0.131639062032358!2;0.320698796727274;0.027975079963073;0.0634662440040444;0.587859879305609!3;0.157015297805762;0.0315831289582951;0.0416112366565268;0.769790336579416!4;0.271346572636928;0.151934405807327;0.038803528961829;0.537915492593916!5;0.221418436676526;0.241702546131557;0.174144846627569;0.362734170564348!6;0.312756696579321;0.303979856025763;0.166493504529014;0.216769942865901!7;0.00282610270120303;0.987021033605246;0.00711481609529092;0.00303804759826029!8;0.00211245043186831;0.121645121808968;0.874128737688061;0.00211369007110284!9;0.0897812520385482;0.088889530437363;0.590612861358673;0.230716356165416!10;0.777901957332929;0.0814935111164949;0.0610897523170966;0.0795147792334794!11;0.872234463688342;0.0124342799565988;0.0250442952311877;0.0902869611238717!12;0.707480898631662;0.0477815530498098;0.0286966251317726;0.216040923186756!13;0.488552266697754;0.135945954881275;0.0987897752573325;0.276712003163638!14;0.187811004928595;0.111904179807271;0.208223488184958;0.492061327079177 | |||
|entrez_gene_id=6672 | |entrez_gene_id=6672 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:IRC900814_primary;SCI09~Sp100_primary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:IRC900814_primary;SCI09~Sp100_primary;SCI09 | ||
|name= | |name=non-redundant127 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Sp100_primary | |representative_motif_id=Sp100_primary | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant127
- db :UNIPROBE
- Id :Sp100_primary
- name :SCI09
- score :0.033167907260417476
- External refs:
- Internal refs:
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Sub Motif Members
