NonredundantMotifs:170: Difference between revisions
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|entrez_gene_id=10002
|motif_cluster_2013_march_motif_members= /JASPAR:MA0164.1;Nr2e3
|name=known170
|representative_motif_db=JASPAR
|representative_motif_...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;4;12;2;5!2;23;0;0;0!3;23;0;0;0!4;0;1;22;0!5;0;23;0;0!6;0;0;0;23!7;0;0;0;23 | |||
|entrez_gene_id=10002 | |entrez_gene_id=10002 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0164.1;Nr2e3 | |motif_cluster_2013_march_motif_members= /JASPAR:MA0164.1;Nr2e3 | ||
|name= | |name=non-redundant170 | ||
|representative_motif_db=JASPAR | |representative_motif_db=JASPAR | ||
|representative_motif_id=MA0164.1 | |representative_motif_id=MA0164.1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant170
- db :JASPAR
- Id :MA0164.1
- name :Nr2e3
- score :0.04725463457857003
- External refs:
- Internal refs:
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Sub Motif Members
