NonredundantMotifs:196: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=51085
|motif_cluster_2013_march_motif_members= /HOCOMOCO:MLXPL_f1
|name=known196
|representative_motif_db=HOCOMOCO
|representative_motif_id...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.5120481927710839;2.4397590361445802;6.53614457831325;0.5120481927710839!2;1.20481927710843;8.79518072289157;0.0;0.0!3;9.27710843373494;0.0;0.0;0.7228915662650599!4;0.0;3.8554216867469897;1.20481927710843;4.939759036144579!5;0.843373493975904;1.20481927710843;7.95180722891566;0.0!6;1.20481927710843;0.0;3.1325301204819302;5.66265060240964!7;0.0;0.0;10.0;0.0!8;4.33734939759036;2.5301204819277103;3.1325301204819302;0.0!9;2.16867469879518;7.1084337349397595;0.0;0.7228915662650599!10;6.2650602409638605;3.01204819277108;0.7228915662650599;0.0!11;4.21686746987952;4.81927710843374;0.0;0.963855421686747!12;1.80722891566265;5.903614457831329;0.0;2.28915662650602!13;0.963855421686747;3.8554216867469897;4.21686746987952;0.963855421686747!14;0.843373493975904;3.25301204819277;2.7710843373494;3.1325301204819302!15;0.0;6.86746987951807;2.16867469879518;0.963855421686747!16;0.963855421686747;0.0;9.03614457831325;0.0!17;0.0;0.0;0.0;10.0!18;0.0;1.20481927710843;8.79518072289157;0.0!19;0.5120481927710839;2.19879518072289;3.76506024096386;3.52409638554217 | |||
|entrez_gene_id=51085 | |entrez_gene_id=51085 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:MLXPL_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:MLXPL_f1 | ||
|name= | |name=non-redundant196 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=MLXPL_f1 | |representative_motif_id=MLXPL_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant196
- db :HOCOMOCO
- Id :MLXPL_f1
- name :
- score :0.9094183653543949
- External refs:
- Internal refs:
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Sub Motif Members
