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NonredundantMotifs:173: Difference between revisions

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Latest revision as of 10:22, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant173
  • db :UNIPROBE
  • Id :Zbtb3_primary
  • name :SCI09
  • score :0.1602509560384016
  • External refs:
EntrezGene:79842
UniProt:79842

  • Internal refs:
EntrezGene:79842


Motif matrix
P0ACGT
10.4011900392620940.1444050209835130.2685312895151450.185873650239249
20.4302235112843460.1685187775482040.2212469141809030.180010796986547
30.1725754106372690.2684992177234140.274136003577080.284789368062237
40.1509706521643690.2971100851702410.2908680758332550.261051186832134
50.1334213909765240.2828418236200940.434717930690560.149018854712821
60.04279842861314710.9411052426148040.001784722002725060.0143116067693242
70.8907882315381260.002550978920351320.1033159943890440.00334479515247916
80.001887194579658650.9513677851503610.04372172263264690.00302329763733399
90.01163331158810530.002217707611794910.002268518677851290.983880462122248
100.003596541484765030.003728217665979730.9848194306715250.00785581017772987
110.002946008395598130.9035199629587290.07245714674462280.02107688190105
120.9084870349306670.05707238626897890.01825557424535110.0161850045550034
130.07623744397968840.3298636410681390.2288955361959080.365003378756264
140.1449264284633450.1629810967383540.1773700492571360.514722425541165
150.1249696758637880.32787598029120.2958135612737210.251340782571291
160.1445916749896210.3138868848213880.3019124579802260.239608982208765
170.1084626728582210.2417474102135610.3502955556032510.299494361324967

Sub Motif Members