FFCP PHASE1:Hg19::chr6:169648692..169648703,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:169648692..169648703,-
|short_description=p7@THBS2
|description=CAGE_peak_7_at_THBS2_5end
|association_with_transcript=71bp_to_ENST00000472733_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7058 | |EntrezGene=7058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11786 | |HGNC=11786 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_ENST00000472733_5end | |||
|cluster_id=chr6:169648692..169648703,- | |||
|coexpression_cluster_id=C1974 | |||
|description=CAGE_peak_7_at_THBS2_5end | |||
|id=chr6:169648692..169648703,- | |||
|ontology_enrichment_celltype=CL:0000055!1.06e-15!180;CL:0000057!1.23e-15!75;CL:0002334!3.70e-12!12;CL:0000723!9.56e-09!436;CL:0000048!1.79e-08!430;CL:0000034!1.98e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0002615;1.55e-17;3!CL:0000197;5.19e-15;6!CL:0000098;5.19e-15;6!CL:0002167;5.19e-15;6!CL:0000136;7.97e-15;13!CL:0000569;1.36e-12;4!CL:0002593;3.34e-12;2!CL:0002617;1.19e-11;2!CL:0002334;2.74e-11;12!CL:0002595;1.70e-10;5!CL:0002579;2.19e-08;3!CL:0002616;4.82e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.60e-17,3;CL:0000197,5.41e-15,6;CL:0000098,5.41e-15,6;CL:0002167,5.41e-15,6;CL:0000136,7.64e-13,15;CL:0002593,2.02e-12,2;CL:0000569,2.44e-12,4;CL:0000011,2.44e-12,4;CL:0002617,8.58e-12,2;CL:0002334,2.38e-11,12;CL:0002595,1.42e-10,5;CL:0002579,1.70e-08,3;CL:0002616,4.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000011;1.36e-12;4 | |||
|ontology_enrichment_disease=DOID:2394!1.68e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.40e-09!6;UBERON:0002358!3.40e-09!6;UBERON:0003684!3.40e-09!6;UBERON:0001178!3.40e-09!6;UBERON:0004457!7.72e-07!12;UBERON:0000042!7.72e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.10e-23;6!UBERON:0002358;3.10e-23;6!UBERON:0003684;3.10e-23;6!UBERON:0001178;3.10e-23;6!UBERON:0004457;9.84e-22;9!UBERON:0000042;9.84e-22;9!UBERON:0002456;3.34e-12;2!UBERON:0003834;1.70e-10;5!UBERON:0001533;1.70e-10;5!UBERON:0003513;1.27e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.32e-23,6;UBERON:0002358,2.32e-23,6;UBERON:0003684,2.32e-23,6;UBERON:0001178,2.32e-23,6;UBERON:0004457,2.58e-16,12;UBERON:0000042,2.58e-16,12;UBERON:0002456,2.02e-12,2;UBERON:0003834,1.42e-10,5;UBERON:0001533,1.42e-10,5;UBERON:0003513,1.12e-07,7 | |||
|phase1_expression=1.99846217197612,1.2846031433459,1.55049844505568,2.00146596706261,4.46961094427288,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,5.44989579422746,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.67355336034844,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,0,1.7308685049499,0,1.43723628363248,0,0,0,0,0.919463387397059,2.10333282469236,0,0,0.427114777637135,0.211931901159562,0,0.103052529238439,0.772921620136887,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,1.45579603071565,3.7470087647404,2.20783381047509,1.28855556491985,0.601892199455438,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,1.68396056659844,1.66580894032411,0.511707249066704,3.05622450172854,0,0.616838775210622,1.24293207719189,0.164254312027618,2.07701771673448,0.697262270759755,0,0,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0.107420244868274,0,0,0.267096106940212,0,0.384380134730212,0,0,0,2.20368642781448,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0,0,0.571890581771475,0,0,0,1.56989728039846,0,0,0.235624804691373,0.202182481573316,0,0,0,1.70599442741899,4.22600587027022,0,0.424216295861138,1.13008116620243,0,1.32687795048244,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,1.64647446479951,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.399358000997982,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0.754703705257725,2.66943366478961,1.37304041038154,1.36107831386915,1.08806040407946,0.147855149989634,0.796483835818512,0.449803112163605,0.621051827505038,0.414706207840855,2.12673371646396,0.521745061811734,0.751288044986092,1.14241563650639,0,0.363697318405119,0.214821114084977,1.39210127963548,0.796191777397232,0.400027764663154,0.686791410365586,0.673498977531838,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0.617602894321944,0.657852148736121,0.353378291891762,0.578742114812744,0,0,0.345430341731199,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.99846217197612,1.2846031433459,1.55049844505568,2.00146596706261,4.46961094427288,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,5.44989579422746,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.67355336034844,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,0,1.7308685049499,0,1.43723628363248,0,0,0,0,0.919463387397059,2.10333282469236,0,0,0.427114777637135,0.211931901159562,0,0.103052529238439,0.772921620136887,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,1.45579603071565,3.7470087647404,2.20783381047509,1.28855556491985,0.601892199455438,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,1.68396056659844,1.66580894032411,0.511707249066704,3.05622450172854,0,0.616838775210622,1.24293207719189,0.164254312027618,2.07701771673448,0.697262270759755,0,0,0.0920809889358963,0,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0.107420244868274,0,0,0.267096106940212,0,0.384380134730212,0,0,0,2.20368642781448,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0,0,0.571890581771475,0,0,0,1.56989728039846,0,0,0.235624804691373,0.202182481573316,0,0,0,1.70599442741899,4.22600587027022,0,0.424216295861138,1.13008116620243,0,1.32687795048244,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,1.64647446479951,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.399358000997982,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.189403005275089,0.754703705257725,2.66943366478961,1.37304041038154,1.36107831386915,1.08806040407946,0.147855149989634,0.796483835818512,0.449803112163605,0.621051827505038,0.414706207840855,2.12673371646396,0.521745061811734,0.751288044986092,1.14241563650639,0,0.363697318405119,0.214821114084977,1.39210127963548,0.796191777397232,0.400027764663154,0.686791410365586,0.673498977531838,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0.617602894321944,0.657852148736121,0.353378291891762,0.578742114812744,0,0,0.345430341731199,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@THBS2 | |||
}} | }} |
Latest revision as of 23:01, 16 September 2015
Short description: | p7@THBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_THBS2_5end |
Coexpression cluster: | C1974_Olfactory_Preadipocyte_Fibroblast_Synoviocyte_Smooth_Adipocyte_tenocyte |
Association with transcript: | 71bp_to_ENST00000472733_5end |
EntrezGene: | THBS2 |
HGNC: | 11786 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.60e-17 | 3 |
receptor cell | 5.41e-15 | 6 |
sensory epithelial cell | 5.41e-15 | 6 |
olfactory epithelial cell | 5.41e-15 | 6 |
fat cell | 7.64e-13 | 15 |
smooth muscle cell of the internal thoracic artery | 2.02e-12 | 2 |
cardiac mesenchymal cell | 2.44e-12 | 4 |
migratory trunk neural crest cell | 2.44e-12 | 4 |
adipocyte of breast | 8.58e-12 | 2 |
preadipocyte | 2.38e-11 | 12 |
smooth muscle cell of the subclavian artery | 1.42e-10 | 5 |
omentum preadipocyte | 1.70e-08 | 3 |
perirenal adipocyte cell | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.32e-23 | 6 |
peritoneum | 2.32e-23 | 6 |
abdominal cavity | 2.32e-23 | 6 |
visceral peritoneum | 2.32e-23 | 6 |
cavity lining | 2.58e-16 | 12 |
serous membrane | 2.58e-16 | 12 |
internal thoracic artery | 2.02e-12 | 2 |
thoracic segment blood vessel | 1.42e-10 | 5 |
subclavian artery | 1.42e-10 | 5 |
trunk blood vessel | 1.12e-07 | 7 |