FFCP PHASE1:Hg19::chr6:32498087..32498098,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32498087..32498098,-
|short_description=p5@HLA-DRB5
|description=CAGE_peak_5_at_HLA-DRB5_5end
|association_with_transcript=-23bp_to_ENST00000374975_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3127 | |EntrezGene=3127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4953 | |HGNC=4953 | ||
|TSSclassifier=strong | |||
|UniProt=Q30154 | |UniProt=Q30154 | ||
|association_with_transcript=-23bp_to_ENST00000374975_5end | |||
|cluster_id=chr6:32498087..32498098,- | |||
|description=CAGE_peak_5_at_HLA-DRB5_5end | |||
|id=chr6:32498087..32498098,- | |||
|ontology_enrichment_celltype=CL:0002087!2.46e-39!119;CL:0002031!8.15e-34!124;CL:0000738!1.28e-33!140;CL:0000037!2.55e-27!172;CL:0000566!2.55e-27!172;CL:0002032!8.35e-27!165;CL:0000837!8.35e-27!165;CL:0000988!1.01e-25!182;CL:0002194!6.38e-23!63;CL:0000576!6.38e-23!63;CL:0000040!6.38e-23!63;CL:0000559!6.38e-23!63;CL:0002009!6.65e-22!65;CL:0000839!4.33e-21!70;CL:0000557!1.20e-20!71;CL:0000766!3.85e-20!76;CL:0002057!2.00e-16!42;CL:0000860!7.16e-15!45;CL:0000542!3.50e-14!53;CL:0000051!3.50e-14!53;CL:0000838!3.43e-13!52;CL:0000763!4.62e-13!112;CL:0000049!4.62e-13!112;CL:0000236!2.14e-08!14;CL:0000084!2.96e-07!25;CL:0000827!2.96e-07!25;CL:0000945!3.34e-07!24;CL:0000826!3.34e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.78e-21;13!CL:0000860;2.23e-12;33!CL:0002057;2.23e-12;33!CL:0000576;1.19e-11;48!CL:0000473;1.24e-11;39!CL:0000234;1.24e-11;39!CL:0002087;1.12e-10;104!CL:0000945;1.14e-10;24!CL:0000738;3.07e-10;136!CL:0000542;1.51e-09;53!CL:0000766;9.18e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.57e-39,115;CL:0000738,3.97e-34,136;CL:0002031,1.13e-30,120;CL:0000037,8.19e-28,168;CL:0000988,5.66e-26,177;CL:0002032,6.75e-26,161;CL:0000837,6.75e-26,161;CL:0002194,1.33e-25,59;CL:0000576,1.33e-25,59;CL:0000040,1.33e-25,59;CL:0000559,1.33e-25,59;CL:0002009,1.30e-24,61;CL:0000766,1.89e-22,72;CL:0000839,2.17e-22,66;CL:0000557,5.50e-22,67;CL:0000236,2.69e-19,14;CL:0000473,1.32e-18,48;CL:0000234,1.32e-18,48;CL:0000860,2.29e-16,42;CL:0002057,2.29e-16,42;CL:0000763,9.49e-15,108;CL:0000049,9.49e-15,108;CL:0000542,5.89e-11,53;CL:0000051,5.89e-11,53;CL:0000945,1.15e-10,24;CL:0000826,1.15e-10,24;CL:0000838,1.48e-09,52;CL:0000134,1.54e-09,354;CL:0002320,3.45e-09,361;CL:0000219,5.89e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-12;42!CL:0000051;1.51e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-27!102;UBERON:0003061!1.18e-27!102;UBERON:0002193!3.89e-25!112;UBERON:0002371!1.65e-18!80;UBERON:0001474!1.73e-16!86;UBERON:0002405!3.86e-14!115;UBERON:0004765!1.54e-12!101;UBERON:0001434!1.54e-12!101;UBERON:0003081!3.07e-09!216;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15;UBERON:0007023!1.22e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.66e-24,98;UBERON:0003061,7.66e-24,98;UBERON:0002193,4.64e-21,108;UBERON:0002371,7.61e-21,76;UBERON:0001474,5.95e-19,82;UBERON:0002405,8.49e-18,93;UBERON:0004765,8.06e-17,90;UBERON:0001434,1.24e-14,100;UBERON:0003081,3.47e-09,203;UBERON:0002384,1.04e-08,371;UBERON:0002204,8.15e-07,167 | |||
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| ||
|short_description=p5@HLA-DRB5 | |||
}} | }} |
Latest revision as of 03:12, 18 September 2015
Short description: | p5@HLA-DRB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HLA-DRB5_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000374975_5end |
EntrezGene: | HLA-DRB5 |
HGNC: | 4953 |
UniProt: | Q30154 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.66e-24 | 98 |
blood island | 7.66e-24 | 98 |
hemolymphoid system | 4.64e-21 | 108 |
bone marrow | 7.61e-21 | 76 |
bone element | 5.95e-19 | 82 |
immune system | 8.49e-18 | 93 |
skeletal element | 8.06e-17 | 90 |
skeletal system | 1.24e-14 | 100 |
lateral plate mesoderm | 3.47e-09 | 203 |
connective tissue | 1.04e-08 | 371 |
musculoskeletal system | 8.15e-07 | 167 |