FFCP PHASE1:Hg19::chr6:7579533..7579588,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:7579533..7579588,+
|short_description=p8@DSP
|description=CAGE_peak_8_at_DSP_5end
|association_with_transcript=-194bp_to_J05211_5end
|EntrezGene=1832
|HG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=P15924 | |UniProt=P15924 | ||
|association_with_transcript=-194bp_to_J05211_5end | |||
|cluster_id=chr6:7579533..7579588,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_8_at_DSP_5end | |||
|id=chr6:7579533..7579588,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-30!254;CL:0000223!3.38e-14!59;CL:0002076!5.05e-12!43;CL:0002251!6.95e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.30e-10;42!CL:0002251;1.48e-10;20!CL:0000039;3.78e-09;7!CL:0000586;3.78e-09;7!CL:0000622;1.79e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.58e-20,253;CL:0000223,5.07e-15,58;CL:0002076,1.03e-14,42;CL:0002251,1.35e-10,20;CL:0000039,2.77e-09,7;CL:0000586,2.77e-09,7;CL:0000622,1.05e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.07e-07;58 | |||
|ontology_enrichment_disease=DOID:305!2.91e-27!106;DOID:0050687!1.37e-20!143;DOID:162!2.98e-09!235;DOID:14566!2.24e-08!239;DOID:299!9.72e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.22e-07;14!DOID:1749;4.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.74e-19,106;DOID:0050687,1.21e-13,143;DOID:3119,3.44e-07,14;DOID:1749,6.22e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.60e-17!169;UBERON:0000925!9.60e-17!169;UBERON:0006595!9.60e-17!169;UBERON:0001007!1.23e-14!155;UBERON:0001555!1.23e-14!155;UBERON:0007026!1.23e-14!155;UBERON:0004921!3.04e-13!129;UBERON:0004185!3.04e-13!129;UBERON:0000077!8.79e-12!130;UBERON:0001041!1.09e-09!98;UBERON:0001004!3.85e-09!72;UBERON:0000062!1.17e-08!511;UBERON:0000466!2.00e-08!126;UBERON:0000065!3.11e-07!53;UBERON:0001048!3.22e-07!168;UBERON:0000464!4.11e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.10e-08;9!UBERON:0001557;1.10e-08;9!UBERON:0002365;4.91e-07;31!UBERON:0002330;4.91e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.39e-11,160;UBERON:0000925,2.39e-11,160;UBERON:0006595,2.39e-11,160;UBERON:0001007,7.13e-10,145;UBERON:0001555,7.13e-10,145;UBERON:0007026,7.13e-10,145;UBERON:0001737,7.20e-09,9;UBERON:0004921,8.72e-09,118;UBERON:0001004,2.05e-08,74;UBERON:0002365,3.04e-07,31;UBERON:0002330,3.04e-07,31;UBERON:0001041,3.57e-07,87;UBERON:0001557,8.52e-07,19 | |||
|phase1_expression=1.2717486548939,3.8538094300377,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,1.39560233594486,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0.443458794925128,0.614843499851882,0,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.993943903390637,0,0.132409180813219,0,0.354668382198357,0,0,1.2333377420858,0,0,0,0,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0,0,1.23633464639278,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,1.07633781413317,1.06778694409284,0.423863802319124,0.900273288253207,0.412210116953756,0.772921620136887,0.18611685633159,1.0126579934476,0.487185025805993,0.757301322732344,0,0.80823028409406,1.42003837006646,0.403008392910561,0.67824236924195,1.54608682530637,1.63647672354501,0,0.365921118388786,0.397589304964456,0.813357600086629,1.7622379352613,1.26160425437814,0.72995471815166,1.56449532329816,0.643240938192885,0,0.928735856063958,1.44375896333917,1.30137480043828,1.51726221070292,1.92808823906786,1.54411561825352,1.30727666455444,1.42362371466658,2.56179485504312,1.17732879075208,2.30848294167834,0,0,0,0,0,0.982827216677626,4.72631925345123,0,0.860919069801795,0.171567810298526,6.25576626829166,0,7.53967293087231,6.11083738046295,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.951270761172991,0.790204397959275,0.858486162094873,0,0,0,0,3.69560682037491,2.97727704209012,4.92571874865666,4.06887513919547,1.91691339582606,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,1.32969058292435,0,0.257207374262142,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,1.29964888536674,0,0,0,5.27174682081482,4.59447743336456,0,0.868687840005475,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70362119990049,4.63915370872621,2.36553622550902,1.52283839490527,0,0,0,3.32112799267718,0.184369168541703,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0.992431231275107,3.06923946576125,2.24528075546459,0.384417447767103,0.511707249066704,4.02134802859019,1.48418066444991,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.232420756919918,2.1754700926492,3.40860999515584,26.1510008577946,0,0.182091168006717,0,0.902399225814824,1.61732207919271,0,2.92278449306521,2.00548094896464,0,0,0.647747748306418,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,1.13345112812495,0,0,1.72279661398852,3.90036147621913,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,2.80984356113663,4.22818148203234,1.91419068741876,6.069466851333,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0,0,1.44333169088268,0,0,0.470719003883896,0,0,0.886860307073351,6.66197860600182,0,0,0,0,0,0,0,0,1.6023610669121,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,1.13654458722565,4.05865624054073,0.593929361665277,13.207910190267,0,0.140669416410513,0,0,0,0,0.276283915531148,16.3756286105279,0.409074730008619,0,2.48831670129446,0.988551862620595,0.895105873378046,0,0.197286811273867,0,0,0,0.185536196323703,0,7.0315495493013,0.262379999988587,0,0.568967241427498,0.508507300585533,10.8738333613251,0,0,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0.32681539055697,5.85579725970134,1.38510465306835,0,1.61394733071642,6.82158097514268,9.56096872913671,1.27600463892768,0.549585560411174,7.99552164027952,0,0,0,0,0,0,0,0,1.89898258075224,0.652931232636591,0.848118428603645,2.16388639742091,0.995261931078505,0.884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.978323094660449,0.242780379534093,0,2.41981432097328,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,6.59527005673497,2.15583274311631,1.13176968554523,1.57254001417827,0,0.580537987734511,0.803982487948041,0.821154570532092,6.88622017067778,0,1.35588444468319,0,0,0,1.95551382734803,0.400794101257669,0.640358984218058,4.39581141080687,4.03453168031497,0.687219576995494,2.74551996579143,0.14405479798815,0.49701014226173,8.01359717697104,0.135904206073614,0.209205692624666,0,0,0,0,0,0.859530882839914,0,2.79282401272254,2.7499250881402,0,7.18844401796368,5.15071257763885,0.89268582976749,0.940568614814168,1.44119953416961,5.82479747637269,2.36349546921671,3.04938676010316,3.43758073656343,0.590564889088493,0,0,0.136203406111576,0.321506296930038,0.550157746388935,2.49264202817511,0.2249738915515,3.0952078182318,0,3.01891218839339,0.630445658393585,0.104909176269996,0.422401346077626,0,1.15149118391667,2.1440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| ||
|short_description=p8@DSP | |||
}} | }} |
Latest revision as of 19:19, 19 September 2015
Short description: | p8@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DSP_5end |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | -194bp_to_J05211_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.58e-20 | 253 |
endodermal cell | 5.07e-15 | 58 |
endo-epithelial cell | 1.03e-14 | 42 |
epithelial cell of alimentary canal | 1.35e-10 | 20 |
germ line cell | 2.77e-09 | 7 |
germ cell | 2.77e-09 | 7 |
acinar cell | 1.05e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.39e-11 | 160 |
endoderm | 2.39e-11 | 160 |
presumptive endoderm | 2.39e-11 | 160 |
digestive system | 7.13e-10 | 145 |
digestive tract | 7.13e-10 | 145 |
primitive gut | 7.13e-10 | 145 |
larynx | 7.20e-09 | 9 |
subdivision of digestive tract | 8.72e-09 | 118 |
respiratory system | 2.05e-08 | 74 |
exocrine gland | 3.04e-07 | 31 |
exocrine system | 3.04e-07 | 31 |
foregut | 3.57e-07 | 87 |
upper respiratory tract | 8.52e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.74e-19 | 106 |
cell type cancer | 1.21e-13 | 143 |
gastrointestinal system cancer | 3.44e-07 | 14 |
squamous cell carcinoma | 6.22e-07 | 14 |