FFCP PHASE1:Hg19::chr7:106720036..106720059,-: Difference between revisions
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|id=chr7:106720036..106720059,-
|short_description=p@chr7:106720036..106720059,-
|description=CAGE_peak_at_chr7:106720036..106720059,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:106720036..106720059,- | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr7:106720036..106720059,- | |||
|id=chr7:106720036..106720059,- | |||
|ontology_enrichment_celltype=CL:0002139!7.17e-54!24;CL:0000115!7.26e-49!35;CL:0000071!7.28e-45!18;CL:0002546!7.28e-45!18;CL:0002078!8.72e-38!44;CL:1000413!9.59e-30!9;CL:0000213!5.77e-28!57;CL:0000215!5.77e-28!57;CL:0002543!1.33e-26!6;CL:0002544!7.06e-26!6;CL:0002618!2.74e-14!3;CL:0005020!7.39e-11!6;CL:0002138!7.39e-11!6;CL:0005022!7.39e-11!6;CL:0000222!9.56e-11!119;CL:0000076!1.10e-10!62;CL:0002545!1.04e-09!2;CL:0002274!1.88e-07!5;CL:0000457!1.88e-07!5;CL:0002191!1.88e-07!5;CL:0000097!1.88e-07!5;CL:0000831!1.88e-07!5;CL:0002028!1.88e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000071;9.84e-80;18!CL:0002139;2.63e-59;24!CL:0002543;7.40e-53;6!CL:1000413;2.82e-46;9!CL:0000115;3.60e-45;36!CL:0002544;2.84e-36;6!CL:0002618;1.02e-27;3!CL:0002078;1.69e-25;45!CL:0000213;7.69e-20;58!CL:0000215;7.69e-20;58!CL:0000076;2.74e-14;63!CL:0002188;6.77e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.12e-79,18;CL:0002546,1.12e-79,18;CL:0002139,2.90e-59,24;CL:0002543,7.09e-53,6;CL:0000115,5.76e-52,36;CL:1000413,3.35e-46,9;CL:0002078,4.31e-41,45;CL:0002544,2.37e-36,6;CL:0000213,2.48e-31,58;CL:0000215,2.48e-31,58;CL:0002618,1.46e-27,3;CL:0000076,2.82e-21,63;CL:0000222,1.08e-13,121;CL:0002188,6.54e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002546;9.84e-80;18 | |||
|ontology_enrichment_disease=DOID:8692!1.35e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.48e-12;31!DOID:9119;2.26e-10;1!DOID:8552;1.03e-09;1!DOID:1240;1.76e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.33e-13,31;DOID:9119,2.37e-10,1;DOID:1240,4.01e-10,39;DOID:8552,8.99e-10,1;DOID:2531,1.45e-07,51;DOID:0060083,1.45e-07,51 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;9.84e-80;18!UBERON:0001986;9.84e-80;18!UBERON:0004852;9.84e-80;18!UBERON:0000487;7.04e-65;22!UBERON:0006914;7.47e-57;25!UBERON:0003915;2.82e-46;9!UBERON:0004700;2.82e-46;9!UBERON:0001917;2.82e-46;9!UBERON:0000490;4.57e-38;33!UBERON:0001638;3.77e-35;9!UBERON:0003920;3.77e-35;9!UBERON:0004582;3.77e-35;9!UBERON:0002066;6.92e-17;5!UBERON:0007500;6.79e-16;56!UBERON:0001981;6.79e-16;56!UBERON:0004537;6.79e-16;56!UBERON:0000055;2.44e-13;65!UBERON:0003914;5.18e-11;74!UBERON:0000947;2.63e-10;21!UBERON:0010191;2.63e-10;21!UBERON:0000025;1.08e-09;93!UBERON:0010260;1.29e-09;9!UBERON:0001637;1.66e-09;42!UBERON:0003509;1.66e-09;42!UBERON:0004572;1.66e-09;42!UBERON:0002049;2.67e-07;75!UBERON:0007798;2.67e-07;75!UBERON:0000119;3.32e-07;139!UBERON:0004573;6.26e-07;33!UBERON:0004571;6.26e-07;33!UBERON:0000483;9.67e-07;136 | |||
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| ||
|short_description=p@chr7:106720036..106720059,- | |||
}} | }} |
Latest revision as of 04:50, 31 July 2015
Short description: | p@chr7:106720036..106720059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:106720036..106720059, - |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.12e-79 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.12e-79 | 18 |
endothelial cell of vascular tree | 2.90e-59 | 24 |
vein endothelial cell | 7.09e-53 | 6 |
endothelial cell | 5.76e-52 | 36 |
endothelial cell of artery | 3.35e-46 | 9 |
meso-epithelial cell | 4.31e-41 | 45 |
aortic endothelial cell | 2.37e-36 | 6 |
lining cell | 2.48e-31 | 58 |
barrier cell | 2.48e-31 | 58 |
endothelial cell of umbilical vein | 1.46e-27 | 3 |
squamous epithelial cell | 2.82e-21 | 63 |
mesodermal cell | 1.08e-13 | 121 |
glomerular endothelial cell | 6.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.12e-79 | 18 |
endothelium | 1.12e-79 | 18 |
cardiovascular system endothelium | 1.12e-79 | 18 |
simple squamous epithelium | 7.83e-65 | 22 |
squamous epithelium | 8.20e-57 | 25 |
endothelial tube | 3.35e-46 | 9 |
arterial system endothelium | 3.35e-46 | 9 |
endothelium of artery | 3.35e-46 | 9 |
vein | 3.67e-35 | 9 |
venous blood vessel | 3.67e-35 | 9 |
venous system | 3.67e-35 | 9 |
epithelial tube open at both ends | 7.27e-23 | 59 |
blood vessel | 7.27e-23 | 59 |
blood vasculature | 7.27e-23 | 59 |
vascular cord | 7.27e-23 | 59 |
vessel | 1.49e-19 | 68 |
umbilical vein | 8.57e-17 | 5 |
vasculature | 9.13e-17 | 78 |
vascular system | 9.13e-17 | 78 |
splanchnic layer of lateral plate mesoderm | 1.27e-15 | 83 |
epithelial tube | 2.98e-14 | 117 |
cardiovascular system | 2.27e-11 | 109 |
circulatory system | 5.25e-11 | 112 |
aorta | 2.50e-10 | 21 |
aortic system | 2.50e-10 | 21 |
umbilical blood vessel | 1.44e-09 | 9 |
artery | 2.30e-09 | 42 |
arterial blood vessel | 2.30e-09 | 42 |
arterial system | 2.30e-09 | 42 |
unilaminar epithelium | 3.73e-09 | 148 |
tube | 1.30e-07 | 192 |
lateral plate mesoderm | 4.63e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.33e-13 | 31 |
acute myeloid leukemia | 2.37e-10 | 1 |
leukemia | 4.01e-10 | 39 |
chronic myeloid leukemia | 8.99e-10 | 1 |
hematologic cancer | 1.45e-07 | 51 |
immune system cancer | 1.45e-07 | 51 |