FFCP PHASE1:Hg19::chr7:135662056..135662114,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:135662056..135662114,-
|short_description=p1@MTPN
|description=CAGE_peak_1_at_MTPN_5end
|association_with_transcript=0bp_to_ENST00000393085,ENST00000435723...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=136319 | |EntrezGene=136319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15667 | |HGNC=15667 | ||
|TSSclassifier=strong | |||
|UniProt=P58546,C9JL85 | |UniProt=P58546,C9JL85 | ||
|association_with_transcript=0bp_to_ENST00000393085,ENST00000435723_5end | |||
|cluster_id=chr7:135662056..135662114,- | |||
|description=CAGE_peak_1_at_MTPN_5end | |||
|id=chr7:135662056..135662114,- | |||
|ontology_enrichment_celltype=CL:0000766!6.62e-14!76;CL:0000738!1.58e-12!140;CL:0002057!1.91e-11!42;CL:0002194!2.35e-11!63;CL:0000576!2.35e-11!63;CL:0000040!2.35e-11!63;CL:0000559!2.35e-11!63;CL:0000557!2.48e-11!71;CL:0000839!2.63e-11!70;CL:0002087!6.33e-11!119;CL:0002009!8.06e-11!65;CL:0000048!4.66e-10!430;CL:0000723!5.80e-10!436;CL:0002031!6.20e-10!124;CL:0000860!6.57e-10!45;CL:0000037!1.72e-09!172;CL:0000566!1.72e-09!172;CL:0002032!3.40e-09!165;CL:0000837!3.40e-09!165;CL:0000763!1.51e-08!112;CL:0000049!1.51e-08!112;CL:0000034!1.67e-08!444;CL:0000988!2.32e-08!182;CL:0000134!1.30e-07!358;CL:0002320!4.28e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-10;33!CL:0002057;2.42e-10;33!CL:0000473;7.67e-09;39!CL:0000234;7.67e-09;39!CL:0000766;4.84e-07;69!CL:0000576;4.97e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.02e-14,72;CL:0000738,6.23e-13,136;CL:0002194,3.74e-12,59;CL:0000576,3.74e-12,59;CL:0000040,3.74e-12,59;CL:0000559,3.74e-12,59;CL:0000557,4.84e-12,67;CL:0000839,5.05e-12,66;CL:0002009,1.47e-11,61;CL:0000860,1.91e-11,42;CL:0002057,1.91e-11,42;CL:0002087,2.43e-11,115;CL:0000473,2.76e-11,48;CL:0000234,2.76e-11,48;CL:0000048,2.34e-10,427;CL:0002031,2.67e-10,120;CL:0000723,2.93e-10,433;CL:0000037,9.53e-10,168;CL:0002032,1.87e-09,161;CL:0000837,1.87e-09,161;CL:0000763,6.79e-09,108;CL:0000049,6.79e-09,108;CL:0000034,9.01e-09,441;CL:0000988,1.55e-08,177;CL:0000134,6.29e-08,354;CL:0002320,2.15e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.37e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.26e-14!112;UBERON:0002390!1.51e-14!102;UBERON:0003061!1.51e-14!102;UBERON:0004765!1.90e-11!101;UBERON:0001434!1.90e-11!101;UBERON:0002371!1.37e-10!80;UBERON:0001474!5.03e-10!86;UBERON:0002204!1.17e-09!167;UBERON:0003081!1.91e-08!216;UBERON:0002384!3.44e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.31e-15,108;UBERON:0002390,3.49e-15,98;UBERON:0003061,3.49e-15,98;UBERON:0001434,1.47e-11,100;UBERON:0002371,3.52e-11,76;UBERON:0002405,1.04e-10,93;UBERON:0001474,1.51e-10,82;UBERON:0003081,4.22e-10,203;UBERON:0002204,1.25e-09,167;UBERON:0004765,1.94e-09,90;UBERON:0000926,3.01e-09,315;UBERON:0004120,3.01e-09,315;UBERON:0006603,3.01e-09,315;UBERON:0002384,1.63e-08,371 | |||
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| ||
|short_description=p1@MTPN | |||
}} | }} |
Latest revision as of 13:28, 16 September 2015
Short description: | p1@MTPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTPN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000393085, ENST00000435723_5end |
EntrezGene: | MTPN |
HGNC: | 15667 |
UniProt: | P58546C9JL85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.02e-14 | 72 |
leukocyte | 6.23e-13 | 136 |
monopoietic cell | 3.74e-12 | 59 |
monocyte | 3.74e-12 | 59 |
monoblast | 3.74e-12 | 59 |
promonocyte | 3.74e-12 | 59 |
granulocyte monocyte progenitor cell | 4.84e-12 | 67 |
myeloid lineage restricted progenitor cell | 5.05e-12 | 66 |
macrophage dendritic cell progenitor | 1.47e-11 | 61 |
classical monocyte | 1.91e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-11 | 42 |
nongranular leukocyte | 2.43e-11 | 115 |
defensive cell | 2.76e-11 | 48 |
phagocyte | 2.76e-11 | 48 |
multi fate stem cell | 2.34e-10 | 427 |
hematopoietic lineage restricted progenitor cell | 2.67e-10 | 120 |
somatic stem cell | 2.93e-10 | 433 |
hematopoietic stem cell | 9.53e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.87e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-09 | 161 |
myeloid cell | 6.79e-09 | 108 |
common myeloid progenitor | 6.79e-09 | 108 |
stem cell | 9.01e-09 | 441 |
hematopoietic cell | 1.55e-08 | 177 |
mesenchymal cell | 6.29e-08 | 354 |
connective tissue cell | 2.15e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.31e-15 | 108 |
hematopoietic system | 3.49e-15 | 98 |
blood island | 3.49e-15 | 98 |
skeletal system | 1.47e-11 | 100 |
bone marrow | 3.52e-11 | 76 |
immune system | 1.04e-10 | 93 |
bone element | 1.51e-10 | 82 |
lateral plate mesoderm | 4.22e-10 | 203 |
musculoskeletal system | 1.25e-09 | 167 |
skeletal element | 1.94e-09 | 90 |
mesoderm | 3.01e-09 | 315 |
mesoderm-derived structure | 3.01e-09 | 315 |
presumptive mesoderm | 3.01e-09 | 315 |
connective tissue | 1.63e-08 | 371 |