FFCP PHASE1:Hg19::chr7:73483284..73483299,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:73483284..73483299,+
|short_description=p14@ELN
|description=CAGE_peak_14_at_ELN_5end
|association_with_transcript=173bp_to_M26867_5end
|EntrezGene=2006
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=173bp_to_M26867_5end | |||
|cluster_id=chr7:73483284..73483299,+ | |||
|coexpression_cluster_id=C731 | |||
|description=CAGE_peak_14_at_ELN_5end | |||
|id=chr7:73483284..73483299,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.37e-13!15;CL:0000057!1.61e-13!75;CL:0002620!7.13e-08!23;CL:0000055!1.55e-07!180;CL:0002615!2.91e-07!3;CL:0000153!3.25e-07!9;CL:0000447!3.25e-07!9;CL:0002580!4.29e-07!3;CL:0002579!5.61e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;8.22e-22;3!CL:0002580;3.86e-21;3!CL:0002579;5.80e-21;3!CL:0002334;6.18e-20;12!CL:0000136;5.93e-19;13!CL:0002617;4.25e-15;2!CL:0002616;3.00e-08;1!CL:1000306;2.00e-07;4!CL:0002547;2.00e-07;4!CL:0000153;4.87e-07;9!CL:0000447;4.87e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,8.52e-22,3;CL:0002580,3.37e-21,3;CL:0002579,8.73e-21,3;CL:0002334,7.07e-20,12;CL:0000136,2.41e-16,15;CL:0002617,4.26e-15,2;CL:0000057,2.30e-10,76;CL:0002616,3.11e-08,1;CL:1000306,2.77e-07,4;CL:0002547,2.77e-07,4;CL:0000153,4.07e-07,9;CL:0000447,4.07e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.25e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.00e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.90e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004457!1.13e-14!12;UBERON:0000042!1.13e-14!12;UBERON:0003688!1.38e-12!6;UBERON:0002358!1.38e-12!6;UBERON:0003684!1.38e-12!6;UBERON:0001178!1.38e-12!6;UBERON:0001443!1.92e-08!11;UBERON:0000310!4.43e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.84e-41;6!UBERON:0002358;5.84e-41;6!UBERON:0003684;5.84e-41;6!UBERON:0001178;5.84e-41;6!UBERON:0004457;1.92e-36;9!UBERON:0000042;1.92e-36;9!UBERON:0000310;3.82e-24;10!UBERON:0001443;6.58e-22;11!UBERON:0004797;2.00e-07;4!UBERON:0000415;2.00e-07;4!UBERON:0007240;2.00e-07;4!UBERON:0005742;2.00e-07;4!UBERON:0005734;2.00e-07;4!UBERON:0004664;2.00e-07;4!UBERON:0004663;2.00e-07;4!UBERON:0004923;2.65e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.14e-41,6;UBERON:0002358,9.14e-41,6;UBERON:0003684,9.14e-41,6;UBERON:0001178,9.14e-41,6;UBERON:0004457,5.03e-27,12;UBERON:0000042,5.03e-27,12;UBERON:0000310,3.19e-24,10;UBERON:0001443,5.59e-22,11;UBERON:0004923,3.04e-10,66;UBERON:0009569,3.57e-09,112;UBERON:0000415,2.77e-07,4;UBERON:0007240,2.77e-07,4;UBERON:0005742,2.77e-07,4;UBERON:0005734,2.77e-07,4;UBERON:0004664,2.77e-07,4;UBERON:0004663,2.77e-07,4;UBERON:0000915,3.22e-07,52 | |||
|phase1_expression=21.0746919953846,6.20891519283851,17.4783461079004,7.00513088471913,18.3254048715188,4.36169262050184,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.50401373190767,0.869079113764942,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0,1.14734648299525,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.7308685049499,0,0,0,0,0,0,3.0648779579902,2.40380894250555,0,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0,0,0.558350568994769,0.337552664482532,0.876933046450788,0.252433774244115,0.184099797284599,0,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,9.6762045049323,1.38115775959256,7.57782254969299,3.45975702990393,8.69902323413396,1.12597744800525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,4.66559381492711,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,1.88645166119599,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0.849635573439084,0.0939839179798536,0.580120991762195,0,0,0,0,2.19100916473955,0,0.143339583151451,0,0,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.404234377916439,0,0,0,0.0717222053926763,1.33064142618405,0,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0 | |phase1_expression=21.0746919953846,6.20891519283851,17.4783461079004,7.00513088471913,18.3254048715188,4.36169262050184,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.50401373190767,0.869079113764942,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0,1.14734648299525,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.7308685049499,0,0,0,0,0,0,3.0648779579902,2.40380894250555,0,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0,0,0.558350568994769,0.337552664482532,0.876933046450788,0.252433774244115,0.184099797284599,0,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,9.6762045049323,1.38115775959256,7.57782254969299,3.45975702990393,8.69902323413396,1.12597744800525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0.422215270595328,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,4.66559381492711,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,2.4441205797345,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,1.88645166119599,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0.849635573439084,0.0939839179798536,0.580120991762195,0,0,0,0,2.19100916473955,0,0.143339583151451,0,0,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.404234377916439,0,0,0,0.0717222053926763,1.33064142618405,0,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0 | ||
|short_description=p14@ELN | |||
}} | }} |
Latest revision as of 10:56, 19 September 2015
Short description: | p14@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ELN_5end |
Coexpression cluster: | C731_Adipocyte_Preadipocyte_adipose_Wilms_salivary_Mesenchymal_epididymis |
Association with transcript: | 173bp_to_M26867_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 8.52e-22 | 3 |
preadipocyte of the breast | 3.37e-21 | 3 |
omentum preadipocyte | 8.73e-21 | 3 |
preadipocyte | 7.07e-20 | 12 |
fat cell | 2.41e-16 | 15 |
adipocyte of breast | 4.26e-15 | 2 |
fibroblast | 2.30e-10 | 76 |
perirenal adipocyte cell | 3.11e-08 | 1 |
fibroblast of tunica adventitia of artery | 2.77e-07 | 4 |
fibroblast of the aortic adventitia | 2.77e-07 | 4 |
GAG secreting cell | 4.07e-07 | 9 |
carbohydrate secreting cell | 4.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.14e-41 | 6 |
peritoneum | 9.14e-41 | 6 |
abdominal cavity | 9.14e-41 | 6 |
visceral peritoneum | 9.14e-41 | 6 |
cavity lining | 5.03e-27 | 12 |
serous membrane | 5.03e-27 | 12 |
breast | 3.19e-24 | 10 |
chest | 5.59e-22 | 11 |
organ component layer | 3.04e-10 | 66 |
subdivision of trunk | 3.57e-09 | 112 |
artery wall | 2.77e-07 | 4 |
tunica adventitia of artery | 2.77e-07 | 4 |
adventitia | 2.77e-07 | 4 |
tunica adventitia of blood vessel | 2.77e-07 | 4 |
aorta tunica adventitia | 2.77e-07 | 4 |
aorta wall | 2.77e-07 | 4 |
thoracic segment of trunk | 3.22e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.90e-08 | 1 |