FFCP PHASE1:Hg19::chr7:73483769..73483788,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:73483769..73483788,-
|short_description=p@chr7:73483769..73483788,-
|description=CAGE_peak_at_chr7:73483769..73483788,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:73483769..73483788,- | |||
|coexpression_cluster_id=C2001 | |||
|description=CAGE_peak_at_chr7:73483769..73483788,- | |||
|id=chr7:73483769..73483788,- | |||
|ontology_enrichment_celltype=CL:0002334!7.98e-16!12;CL:0000057!1.58e-14!75;CL:0002580!8.86e-11!3;CL:0000135!1.04e-10!3;CL:0000386!1.04e-10!3;CL:0000388!1.04e-10!3;CL:0002579!7.69e-10!3;CL:0002617!1.66e-07!2;CL:0002620!2.88e-07!23;CL:0000055!4.99e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002615;9.07e-19;3!CL:0002580;1.77e-18;3!CL:0002616;4.72e-15;1!CL:0002581;1.72e-14;1!CL:0002334;1.82e-10;12!CL:0000136;6.30e-10;13!CL:0000138;7.26e-10;6!CL:0000153;7.31e-07;9!CL:0000447;7.31e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,6.06e-19,3;CL:0002580,1.36e-18,3;CL:0002616,4.73e-15,1;CL:0002581,1.41e-14,1;CL:0002334,1.57e-10,12;CL:0000058,8.48e-10,6;CL:0000138,8.48e-10,6;CL:0000136,1.00e-08,15;CL:0000153,8.10e-07,9;CL:0000447,8.10e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.16e-15;1!UBERON:0006965;6.80e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.37e-13!6;UBERON:0002358!2.37e-13!6;UBERON:0003684!2.37e-13!6;UBERON:0001178!2.37e-13!6;UBERON:0004457!5.67e-12!12;UBERON:0000042!5.67e-12!12;UBERON:0000043!1.04e-10!3;UBERON:0001443!2.31e-10!11;UBERON:0000310!4.40e-08!10;UBERON:0005406!5.87e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;9.95e-28;2!UBERON:0002426;1.72e-14;1!UBERON:0003831;1.72e-14;1!UBERON:0003898;1.72e-14;1!UBERON:0004830;1.72e-14;1!UBERON:0003830;1.72e-14;1!UBERON:0005175;1.72e-14;1!UBERON:0001774;1.72e-14;1!UBERON:0001103;1.72e-14;1!UBERON:0001443;2.30e-11;11!UBERON:0003688;7.26e-10;6!UBERON:0002358;7.26e-10;6!UBERON:0003684;7.26e-10;6!UBERON:0001178;7.26e-10;6!UBERON:0003127;6.80e-08;2!UBERON:0005090;6.80e-08;2!UBERON:0001630;6.80e-08;2!UBERON:0004457;7.31e-07;9!UBERON:0000042;7.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,8.13e-28,2;UBERON:0002426,1.23e-14,1;UBERON:0003831,1.23e-14,1;UBERON:0003898,1.23e-14,1;UBERON:0004830,1.23e-14,1;UBERON:0003830,1.23e-14,1;UBERON:0005175,1.23e-14,1;UBERON:0001774,1.23e-14,1;UBERON:0001103,1.23e-14,1;UBERON:0010084,1.23e-14,1;UBERON:0001443,1.89e-11,11;UBERON:0003688,5.94e-10,6;UBERON:0002358,5.94e-10,6;UBERON:0003684,5.94e-10,6;UBERON:0001178,5.94e-10,6;UBERON:0005090,5.74e-08,2;UBERON:0001630,5.74e-08,2;UBERON:0003127,8.04e-08,2 | |||
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| ||
|short_description=p@chr7:73483769..73483788,- | |||
}} | }} |
Latest revision as of 11:32, 31 July 2015
Short description: | p@chr7:73483769..73483788, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73483769..73483788, - |
Coexpression cluster: | C2001_Chondrocyte_Adipocyte_Preadipocyte_basal_trachea_Fibroblast_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 6.06e-19 | 3 |
preadipocyte of the breast | 1.36e-18 | 3 |
perirenal adipocyte cell | 4.73e-15 | 1 |
perirenal preadipocyte | 1.41e-14 | 1 |
preadipocyte | 1.57e-10 | 12 |
chondroblast | 8.48e-10 | 6 |
chondrocyte | 8.48e-10 | 6 |
fat cell | 1.00e-08 | 15 |
GAG secreting cell | 8.10e-07 | 9 |
carbohydrate secreting cell | 8.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 8.13e-28 | 2 |
chest muscle | 1.23e-14 | 1 |
respiratory system muscle | 1.23e-14 | 1 |
skeletal muscle of trunk | 1.23e-14 | 1 |
respiratory system skeletal muscle | 1.23e-14 | 1 |
thoracic segment muscle | 1.23e-14 | 1 |
chest organ | 1.23e-14 | 1 |
muscle of trunk | 1.23e-14 | 1 |
diaphragm | 1.23e-14 | 1 |
future diaphragm | 1.23e-14 | 1 |
chest | 1.89e-11 | 11 |
omentum | 5.94e-10 | 6 |
peritoneum | 5.94e-10 | 6 |
abdominal cavity | 5.94e-10 | 6 |
visceral peritoneum | 5.94e-10 | 6 |
muscle structure | 5.74e-08 | 2 |
muscle organ | 5.74e-08 | 2 |
open tracheal system trachea | 8.04e-08 | 2 |