FFCP PHASE1:Hg19::chr10:11374307..11374322,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:11374307..11374322,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:11374307..11374322,+ | |||
|id=chr10:11374307..11374322,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.75e-11!172;CL:0000566!3.75e-11!172;CL:0000988!8.58e-11!182;CL:0002032!1.41e-10!165;CL:0000837!1.41e-10!165;CL:0000738!4.73e-09!140;CL:0002087!1.12e-08!119;CL:0002031!2.62e-07!124;CL:0000542!6.22e-07!53;CL:0000051!6.22e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000775;9.66e-33;3!CL:0000094;1.11e-12;8!CL:0000081;2.27e-09;11!CL:0000540;6.83e-08;6!CL:0000404;6.83e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,9.20e-33,3;CL:0000094,1.09e-12,8;CL:0000081,2.25e-09,11;CL:0000540,5.17e-08,6;CL:0000031,5.17e-08,6;CL:0000404,5.17e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.62e-12;1!UBERON:0004874;8.62e-12;1!CL:0000031;6.83e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.42e-11!34;UBERON:0003528!1.42e-11!34;UBERON:0003080!9.37e-11!42;UBERON:0001869!1.15e-10!32;UBERON:0001893!1.90e-10!34;UBERON:0000956!1.97e-10!25;UBERON:0000203!1.97e-10!25;UBERON:0002780!4.54e-10!41;UBERON:0001890!4.54e-10!41;UBERON:0006240!4.54e-10!41;UBERON:0002791!4.79e-10!33;UBERON:0001049!7.06e-10!57;UBERON:0005068!7.06e-10!57;UBERON:0006241!7.06e-10!57;UBERON:0007135!7.06e-10!57;UBERON:0003056!1.13e-09!61;UBERON:0007023!2.63e-09!115;UBERON:0003075!2.79e-09!86;UBERON:0007284!2.79e-09!86;UBERON:0005743!8.73e-09!86;UBERON:0002619!8.79e-09!22;UBERON:0001017!1.14e-08!82;UBERON:0002616!2.06e-08!59;UBERON:0002346!2.58e-08!90;UBERON:0000073!1.62e-07!94;UBERON:0001016!1.62e-07!94;UBERON:0001950!2.55e-07!20;UBERON:0000955!3.54e-07!69;UBERON:0006238!3.54e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;8.62e-12;1!UBERON:0002135;8.62e-12;1!UBERON:0000941;8.62e-12;1!UBERON:0007195;8.62e-12;1!UBERON:0001785;8.62e-12;1!UBERON:0002464;8.62e-12;1!UBERON:0004904;8.62e-12;1!UBERON:0008811;8.62e-12;1!UBERON:0001021;8.62e-12;1!UBERON:0002771;9.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,5.05e-12,1;UBERON:0008811,5.05e-12,1;UBERON:0006258,5.05e-12,1;UBERON:0005876,5.05e-12,1;UBERON:0004874,5.05e-12,1;UBERON:0000941,5.62e-12,1;UBERON:0001785,5.62e-12,1;UBERON:0002464,5.62e-12,1;UBERON:0004904,5.62e-12,1;UBERON:0001021,5.62e-12,1;UBERON:0003902,5.62e-12,1;UBERON:0005425,5.62e-12,1;UBERON:0002135,1.07e-11,1;UBERON:0007195,1.19e-11,1;UBERON:0002771,9.44e-07,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0.447830948479849,0.647787332037959,0,0,0,0.242584061187816,0,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0,0,0,0.564727018627814,0.818718450173537,0.449446968890169,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0.628975936525128,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,1.57204305099666,0.205601498999509,0,0.32592226663359,0.946895611469467,0,0,0.589211814949674,0.221533894583621,0.270803863765016,0.640456598628376,0.390178042679635,0.493313713811028,0.829050053357545,0.289803085735052,0.444859689486181,0.267540828089713,1.04535523804977,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0.821127996921047,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.130979075497713,0,0.370784442784429,0,0,0.531831842075461,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.20575750823834,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0.112085143993527,0.394061520403854,0.431255149719035,0.641715181398742,0.508189248444927,0,1.54657762555539,0.502548796003046,1.27587750330633,3.74503511973591,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0,1.2942852049117,0.74709290462411,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0.2023155617111,0.929691098594572,0.62962469366128,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0.540031437238115,0,0,0,0,0.557409525377156,0,0,0.478278818186467,0.997896857164083,0.5745161103971,0,0.324621940274555,0.561594356226918,0.684704037099577,0,0,0.338583555603207,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0.447352215784832,0,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0.703347082052564,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,1.02314474045374,0,2.3948309234694,1.11136990144637,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0.468528891450678,0.182454789215666,0,0,0,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.544813624446302,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,3.90484047686282,0.876336514945499,0.573409195690071,0,0,0.138348634936231,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0.194860308839388,0.132864840313363,0,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.478901577171454,0.41023272848151,0.756215088665154,0,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.253663240775627,0,0,1.48863353516788,0,0,0,0,0.606965604236632,0,0,0.115233987555779,0,0.271878931907327,0.197318320688547,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0,0,0,0.143339583151451,0.315543124386369,0.0679914901909147,0.872701380680755,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.258355639344024,0.248298857183432,0.224263725161227,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0.961705476909699 | |||
|short_description=p@chr10:11374307..11374322,+ | |||
}} |
Latest revision as of 10:29, 23 July 2015
Short description: | p@chr10:11374307..11374322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11374307..11374322, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 9.20e-33 | 3 |
granulocyte | 1.09e-12 | 8 |
blood cell | 2.25e-09 | 11 |
neuron | 5.17e-08 | 6 |
neuroblast | 5.17e-08 | 6 |
electrically signaling cell | 5.17e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
penis | 5.05e-12 | 1 |
intromittent organ | 5.05e-12 | 1 |
lateral plate mesenchyme | 5.05e-12 | 1 |
undifferentiated genital tubercle | 5.05e-12 | 1 |
somatopleure | 5.05e-12 | 1 |
cranial nerve II | 5.62e-12 | 1 |
cranial nerve | 5.62e-12 | 1 |
nerve trunk | 5.62e-12 | 1 |
nerve connecting eye with brain | 5.62e-12 | 1 |
nerve | 5.62e-12 | 1 |
retinal neural layer | 5.62e-12 | 1 |
presumptive neural retina | 5.62e-12 | 1 |
mitral valve | 1.07e-11 | 1 |
stroma of bone marrow | 1.19e-11 | 1 |
middle temporal gyrus | 9.44e-07 | 2 |