FFCP PHASE1:Hg19::chr10:90697890..90697903,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:90697890..90697903,- | |||
|coexpression_cluster_id=C508 | |||
|description=CAGE_peak_at_chr10:90697890..90697903,- | |||
|id=chr10:90697890..90697903,- | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-11!180;CL:0000057!5.38e-08!75;CL:0000187!6.47e-08!54;CL:0000393!8.78e-08!60;CL:0000211!8.78e-08!60;CL:0000680!1.52e-07!57;CL:0000056!1.52e-07!57;CL:0000355!1.52e-07!57;CL:0000183!2.74e-07!59;CL:0000192!7.13e-07!42;CL:0000514!7.13e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.52e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!4.88e-09!63;UBERON:0001015!4.88e-09!63;UBERON:0000383!4.88e-09!63;UBERON:0001134!2.91e-08!61;UBERON:0002036!2.91e-08!61;UBERON:0003082!2.91e-08!61;UBERON:0004290!6.97e-07!70;UBERON:0000914!7.82e-07!83;UBERON:0002329!7.82e-07!83;UBERON:0003077!7.82e-07!83;UBERON:0003059!7.82e-07!83;UBERON:0007282!7.82e-07!83;UBERON:0009618!7.82e-07!83;UBERON:0007285!7.82e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.41e-07;9!UBERON:0000042;1.41e-07;9!UBERON:0005904;2.81e-07;4!UBERON:0003688;5.97e-07;6!UBERON:0002358;5.97e-07;6!UBERON:0003684;5.97e-07;6!UBERON:0001178;5.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,2.90e-07,4;UBERON:0003688,5.43e-07,6;UBERON:0002358,5.43e-07,6;UBERON:0003684,5.43e-07,6;UBERON:0001178,5.43e-07,6 | |||
|phase1_expression=2.54349730978779,12.203729861786,4.93340414335899,18.0131937035635,19.6662881548007,18.3191090061077,27.8629865985142,0,0.522371256399677,0,0,0,0,0.123766352960047,0,4.70627602516243,1.20538905604795,4.38186054232424,0.975865597581014,0.123121058076788,0,0,0,0.410623275218653,0.627713197974014,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0,0.50133791063589,0.579386075843295,0,0,0.378139268656271,1.10864698731282,0.702678285545008,1.44076983047484,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,2.5326102332916,0.132409180813219,0,0,2.80338800071154,6.4049397437823,9.37336683985208,0,0.67355336034844,0.326923806226917,0.302714855289863,0,0,0,0,0.597794722207204,0,0,0,0,0,0.103325781175765,1.18800285728205,8.40707559547093,0,0,0,0,0,0.438977620880838,23.9060480723235,3.45547535485173,1.24775401476023,0.89694817844431,1.06778694409284,0.211931901159562,0.300091096084402,0.515262646192195,0.515281080091258,0.930584281657949,0.337552664482532,1.85130309806277,0.757301322732344,2.11714766877288,0.161646056818812,2.13005755509969,3.02256294682921,1.18692414617341,0,0,0,0,0,0,0,0,0,0,3.85944562915731,0,1.39310378409594,0,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,1.44331342025273,0,1.6437217193015,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.600686115687835,0,0.112131084345361,0,0,1.55126058909333,3.57656445851882,0,4.5209479819428,17.6812642749322,0,0,0,1.14382394926518,0,0,0.325736184293735,1.42156779497018,0,0.904318131178758,2.61460037580088,2.59929777073348,0,0,0,3.59437283237374,2.29723871668228,0,0.723906533337896,0,0,0,0,0,0,0,0,0.773288812777695,0,2.55175500661265,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,21.2130278761423,9.09987842865525,2.20783381047509,6.55991923959194,0,4.5481500811197,1.03473071292505,2.65690239414175,0.921845842708516,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0,0.496215615637554,1.53461973288062,7.85848264412606,0.512556597022804,2.55853624533352,4.66476371316462,2.96836132889982,0.154209693802656,0.532685175939381,0.164254312027618,0.519254429183621,1.27831416305955,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.546273504020151,3.14698595902618,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.640986253728404,0,0,0,6.42735719376638,0.193341436584244,0.154048617114644,0.460511024178389,0.275673144969061,0.322260734604821,0.580066775656914,0.255679882248303,1.06838442776085,0,0,0,0.10115778085555,1.39453664789186,0,0,0.308033580176089,0,0,0.74129687641568,1.28812398067792,0,0.632758849437452,2.66882271493355,0,0,0,1.56989728039846,1.07923474549989,2.47083326762449,0.942499218765491,0,0,0.421258456238981,0.48763373908959,0.487426979262569,0,0.272999822815972,1.1312434556297,0,0,2.65375590096488,0.876901770507525,0,1.31178950409327,2.43492452355245,5.5768229657955,2.53526042279017,0.286822704408103,0.982490410131212,2.1400263088875,0.354761064070598,1.05553817648832,1.31717957183961,0,0,0,0,1.08890984861323,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,31.2819341554179,2.21027132424918,0,0,0,15.5519793830904,0,0,0,9.17383672423483,0,0,0,0.278304294485554,0,0,0,5.07499702804355,0.1137934482855,0,0,0,0,0.347249989866585,0,0,0,0,0.295547618953547,2.19385397153973,0.10893846351899,0,7.07942378234933,0,0,0,0,0,2.28993983504656,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95735737970654,1.68069372556344,6.72133159426988,0,0.123563938946503,0.313265848516366,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,3.55125962564451,3.62972148145992,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0.173559738335131,0,0,8.38688007561745,0,0,0,0,6.40127508823568,0,4.06765333404958,0,0,0.0633107959558787,0,0,8.5381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57859264851974,0,1.67569440763353,2.29160424011684,0,0.399358000997982,0,0,0.470284307407084,5.04419836959365,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,10.7204298956005,0.662091970365432,0,1.08599920350743,6.04955043840887,5.87857248196936,0,0,0.681552087141687,0,0,1.32506888912221,0,0,0,0,0.747511887973863,0.628817220398664,1.24271716604159,3.47316215268366,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0.705797459094515,0,0,0.149254802886874,0.701139929541673,0.554805861502613,0.378806010550178,0.50313580350515,2.66943366478961,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0,0.465788870628778,0,0.53168342911599,3.65221543268214,1.50257608997218,3.42724690951916,0,2.54588122883583,0.537052785212442,0.928067519756987,9.55430132876678,0,1.71697852591396,1.6837474438296,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,1.72715170865599,0,0,0,0,0,6.87980682577466,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.123935764259002,0,2.54403480522735,0,0,4.23211132428821,10.4123462300088,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0.762764190934334,0,0.994581110581374,1.5794168953344,0.20170506870352,0,0,0,0,0,0,0,0,0,3.28954660114309,20.3446583139611,0.703484977438482,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,2.74725824976799,0,0,9.13158720509496,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0.17071847709395,0,1.29068207646083,0,0,10.1612892045823,0,0,0,0,0,0,0,0.205325613712494,6.95888658802919,0.485710993059139,0,0,0.118920090777569,0,0,0,0.385870790539723,3.49695296806332,0,22.0633489578515,0,0.785233868459781,0,0.4226557275834,0.679708458751268,0.375935671919414,0.0644578879735772,0,0,0,0,5.11235471772562,1.83491713361816,0,0,0.0679914901909147,0,2.1161073620616,0.743990036333503,0.462175628631418,0.865253124247578,0,0,0.506794004045748,0,0,0,0,2.8795905322931,1.33982065078089,0,0,2.98527574661373,1.90451545170992,0,0,0.112131862580613,0.509177266225319,0.606351566874658,1.74173398317569,1.71116650542641,0.134704106029175,0.717222053926764,3.32660356546013,0,0,0,0,28.1569130884145,2.32258743947446,22.7861859856814,0,2.21401172950129,0 | |||
|short_description=p@chr10:90697890..90697903,- | |||
}} |
Latest revision as of 16:30, 23 July 2015
Short description: | p@chr10:90697890..90697903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90697890..90697903, - |
Coexpression cluster: | C508_Adipocyte_aorta_smooth_umbilical_bladder_hepatic_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 2.90e-07 | 4 |
omentum | 5.43e-07 | 6 |
peritoneum | 5.43e-07 | 6 |
abdominal cavity | 5.43e-07 | 6 |
visceral peritoneum | 5.43e-07 | 6 |