FFCP PHASE1:Hg19::chr11:119247004..119247044,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12618 | |||
|TSSclassifier=strong | |||
|UniProt=E9PSH6 | |||
|association_with_transcript=21bp_to_ENST00000531070_5end | |||
|cluster_id=chr11:119247004..119247044,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_USP2_5end | |||
|id=chr11:119247004..119247044,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.53e-19;82!UBERON:0006241;3.06e-10;3!UBERON:0003057;3.06e-10;3!UBERON:0002532;1.12e-07;206!UBERON:0010316;1.12e-07;206!UBERON:0010122;9.68e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.25e-72!115;UBERON:0001049!3.77e-57!57;UBERON:0005068!3.77e-57!57;UBERON:0006241!3.77e-57!57;UBERON:0007135!3.77e-57!57;UBERON:0005743!2.47e-55!86;UBERON:0001017!1.53e-54!82;UBERON:0000073!3.20e-50!94;UBERON:0001016!3.20e-50!94;UBERON:0002616!8.75e-47!59;UBERON:0003080!5.49e-46!42;UBERON:0000955!5.62e-45!69;UBERON:0006238!5.62e-45!69;UBERON:0002780!7.97e-45!41;UBERON:0001890!7.97e-45!41;UBERON:0006240!7.97e-45!41;UBERON:0003075!4.08e-42!86;UBERON:0007284!4.08e-42!86;UBERON:0002020!1.14e-40!34;UBERON:0003528!1.14e-40!34;UBERON:0001893!1.41e-40!34;UBERON:0002346!1.97e-39!90;UBERON:0002791!3.56e-39!33;UBERON:0001869!2.41e-37!32;UBERON:0004121!2.15e-34!169;UBERON:0000924!4.61e-33!173;UBERON:0006601!4.61e-33!173;UBERON:0000153!3.67e-32!129;UBERON:0007811!3.67e-32!129;UBERON:0000033!8.03e-32!123;UBERON:0003056!2.12e-31!61;UBERON:0000956!3.13e-27!25;UBERON:0000203!3.13e-27!25;UBERON:0002619!7.17e-27!22;UBERON:0001950!3.46e-24!20;UBERON:0004111!1.39e-17!241;UBERON:0000025!2.94e-16!194;UBERON:0002308!4.50e-15!9;UBERON:0000125!4.50e-15!9;UBERON:0002420!8.78e-15!9;UBERON:0007245!8.78e-15!9;UBERON:0010009!8.78e-15!9;UBERON:0010011!8.78e-15!9;UBERON:0000454!8.78e-15!9;UBERON:0000475!1.64e-14!365;UBERON:0000477!2.03e-14!286;UBERON:0002298!2.02e-13!8;UBERON:0003076!4.18e-12!15;UBERON:0003057!4.18e-12!15;UBERON:0009663!5.59e-12!7;UBERON:0000483!2.40e-11!309;UBERON:0000062!2.42e-11!511;UBERON:0000481!3.31e-11!347;UBERON:0000119!4.90e-11!312;UBERON:0000200!4.56e-10!6;UBERON:0001871!1.51e-09!7;UBERON:0004732!2.32e-09!13;UBERON:0000922!1.18e-08!612;UBERON:0000349!1.32e-08!5;UBERON:0000064!1.59e-08!219;UBERON:0001872!1.77e-08!5;UBERON:0000467!3.71e-08!625;UBERON:0004733!3.74e-08!12;UBERON:0002028!3.74e-08!12;UBERON:0007277!3.74e-08!12;UBERON:0000480!4.29e-08!626;UBERON:0000468!5.53e-08!659;UBERON:0002050!1.07e-07!605;UBERON:0005423!1.07e-07!605;UBERON:0000923!2.57e-07!604;UBERON:0005291!2.57e-07!604;UBERON:0006598!2.57e-07!604;UBERON:0002532!2.57e-07!604;UBERON:0000369!2.65e-07!4;UBERON:0002435!2.65e-07!4;UBERON:0000204!2.65e-07!4;UBERON:0010082!2.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.18e-45;34!UBERON:0003528;2.94e-44;34!UBERON:0002020;2.94e-44;34!UBERON:0000073;3.82e-42;53!UBERON:0002616;3.82e-42;53!UBERON:0002791;5.12e-42;32!UBERON:0001869;1.03e-41;32!UBERON:0002780;8.70e-41;41!UBERON:0001890;8.70e-41;41!UBERON:0002619;2.71e-34;22!UBERON:0001950;2.65e-33;20!UBERON:0001017;3.59e-31;75!UBERON:0000956;8.34e-30;25!UBERON:0000203;8.34e-30;25!UBERON:0000955;6.53e-28;68!UBERON:0000125;3.75e-27;9!UBERON:0002308;3.75e-27;9!UBERON:0002420;1.75e-26;9!UBERON:0007245;1.75e-26;9!UBERON:0010009;1.75e-26;9!UBERON:0010011;1.75e-26;9!UBERON:0000454;1.75e-26;9!UBERON:0001016;1.15e-25;83!UBERON:0009663;2.60e-21;7!UBERON:0002298;5.62e-19;6!UBERON:0000200;1.08e-17;6!UBERON:0004732;1.39e-17;13!UBERON:0007023;1.57e-16;114!UBERON:0004733;2.89e-15;12!UBERON:0002028;2.89e-15;12!UBERON:0000369;1.94e-12;4!UBERON:0002435;1.94e-12;4!UBERON:0000204;1.94e-12;4!UBERON:0001871;1.04e-10;6!UBERON:0000988;2.14e-10;3!UBERON:0001896;2.66e-10;3!UBERON:0005290;2.66e-10;3!UBERON:0002240;3.06e-10;3!UBERON:0005174;3.06e-10;3!UBERON:0001137;3.06e-10;3!UBERON:0000349;3.88e-10;5!UBERON:0001872;3.97e-10;5!UBERON:0011216;6.34e-10;132!UBERON:0001870;1.04e-09;3!UBERON:0005383;1.34e-09;3!UBERON:0005382;1.34e-09;3!UBERON:0002680;3.28e-08;9!UBERON:0001895;3.28e-08;9!UBERON:0001897;7.72e-08;2!UBERON:0010225;7.72e-08;2!UBERON:0010314;1.14e-07;132!UBERON:0001875;1.39e-07;2!UBERON:0006514;1.39e-07;2!UBERON:0002148;1.53e-07;2!UBERON:0006331;1.53e-07;2!UBERON:0009662;1.53e-07;2!UBERON:0001894;2.03e-07;7!UBERON:0005162;2.34e-07;2!UBERON:0000122;2.34e-07;2!UBERON:0002702;4.12e-07;2!UBERON:0002771;4.25e-07;2!UBERON:0001876;7.30e-07;2!UBERON:0001873;9.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.24e-81,56;UBERON:0005068,1.24e-81,56;UBERON:0006241,1.24e-81,56;UBERON:0007135,1.24e-81,56;UBERON:0000073,1.96e-73,53;UBERON:0002616,1.96e-73,53;UBERON:0001017,8.55e-71,81;UBERON:0001016,1.14e-65,89;UBERON:0000955,5.22e-64,68;UBERON:0006238,5.22e-64,68;UBERON:0003075,3.28e-61,82;UBERON:0007284,3.28e-61,82;UBERON:0002780,9.29e-59,41;UBERON:0001890,9.29e-59,41;UBERON:0003080,9.29e-59,41;UBERON:0006240,9.29e-59,41;UBERON:0002346,7.36e-58,86;UBERON:0007023,8.91e-58,114;UBERON:0003528,2.91e-53,34;UBERON:0002020,2.91e-53,34;UBERON:0001893,4.06e-53,34;UBERON:0010371,1.30e-50,104;UBERON:0002791,9.36e-48,32;UBERON:0001869,1.91e-47,32;UBERON:0003056,2.11e-45,61;UBERON:0010314,8.18e-36,132;UBERON:0004121,4.32e-35,171;UBERON:0000924,4.32e-35,171;UBERON:0006601,4.32e-35,171;UBERON:0002619,1.81e-34,22;UBERON:0001950,1.82e-33,20;UBERON:0011216,1.04e-30,223;UBERON:0000956,5.85e-30,25;UBERON:0000203,5.85e-30,25;UBERON:0000125,4.13e-27,9;UBERON:0002308,4.13e-27,9;UBERON:0002420,1.47e-26,9;UBERON:0007245,1.47e-26,9;UBERON:0010009,1.47e-26,9;UBERON:0010011,1.47e-26,9;UBERON:0000454,1.47e-26,9;UBERON:0000025,8.89e-25,192;UBERON:0003076,7.26e-23,15;UBERON:0003057,7.26e-23,15;UBERON:0009663,3.04e-21,7;UBERON:0002298,6.00e-19,6;UBERON:0000200,1.25e-17,6;UBERON:0004732,1.41e-17,13;UBERON:0004111,1.87e-17,240;UBERON:0000483,4.70e-16,306;UBERON:0000119,8.96e-16,309;UBERON:0004733,3.01e-15,12;UBERON:0002028,3.01e-15,12;UBERON:0007277,3.01e-15,12;UBERON:0000369,2.04e-12,4;UBERON:0002435,2.04e-12,4;UBERON:0000204,2.04e-12,4;UBERON:0010082,2.04e-12,4;UBERON:0001871,8.57e-11,6;UBERON:0000988,2.18e-10,3;UBERON:0001896,2.79e-10,3;UBERON:0005290,2.79e-10,3;UBERON:0010096,2.79e-10,3;UBERON:0000349,3.10e-10,5;UBERON:0002240,3.26e-10,3;UBERON:0005174,3.26e-10,3;UBERON:0001137,3.26e-10,3;UBERON:0001872,3.41e-10,5;UBERON:0001870,1.00e-09,3;UBERON:0005383,1.27e-09,3;UBERON:0005382,1.27e-09,3;UBERON:0000923,1.51e-08,560;UBERON:0010316,1.51e-08,560;UBERON:0005291,1.51e-08,560;UBERON:0006598,1.51e-08,560;UBERON:0010317,1.51e-08,560;UBERON:0002532,1.51e-08,560;UBERON:0002050,2.20e-08,564;UBERON:0002680,3.31e-08,9;UBERON:0001895,3.31e-08,9;UBERON:0010092,3.31e-08,9;UBERON:0000922,6.46e-08,592;UBERON:0001897,7.85e-08,2;UBERON:0010225,7.85e-08,2;UBERON:0005423,1.02e-07,581;UBERON:0002148,1.44e-07,2;UBERON:0006331,1.44e-07,2;UBERON:0009662,1.44e-07,2;UBERON:0001875,1.58e-07,2;UBERON:0006514,1.58e-07,2;UBERON:0005162,2.23e-07,2;UBERON:0000122,2.23e-07,2;UBERON:0001894,2.38e-07,7;UBERON:0006222,2.38e-07,7;UBERON:0002702,4.81e-07,2;UBERON:0002771,5.10e-07,2;UBERON:0001876,5.26e-07,2;UBERON:0001873,7.76e-07,2;UBERON:0010122,7.76e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,1.15014803749563,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,3.90419561572865,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,4.64209074154692,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,2.90799823828566,4.91670920257812,0,0,0,0.724999575434793,0.1137934482855,0,0,0.689486746482929,0,0,1.77148277162768,3.85908603601305,0,1.76926815889959,1.18219047581419,1.75508317723178,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,14.6260458568069,0,4.45102446878144,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,2.9756074099263,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,7.52979583905962,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0,0,1.73323001075892,2.14281231791033,2.49393112260484,0.196854963029498,0,0.795229689809303,5.99294986890933,0,0,0.415440338029185,0,0,2.24773359634691,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20558190535443,4.89260626447953,0,0.704815022316672,1.38823636338003,4.71612915298998,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,3.54427271986794,2.19647276823534,3.1297732676625,2.29363678276028,5.99016878299002,8.258821591204,0.138348634936231,1.24980407962107,1.97143852804142,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42426995685538,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30335808146279,0,6.38535436228605,2.87162909937057,0.252071696221718,3.73449163306777,5.32869630585109,2.85538840518309,0.196295437002051,0,0,0.346576998451015,0,0,0,1.35378591028663,0,0,0,0.163771917510097,0,2.566428215499,3.90539049306924,5.1671699125296,3.6781169912466,0.546974809018219,0.548257766857182,0.992422356778588,0,0.766574565837572,0,0,0.606965604236632,1.13831095675649,0,0,0,4.41803264349406,2.95977481032821,0,0,0.39246546425257,4.08500533781605,0,0,0,0,2.07281978112303,0,0,0,0,0,0.17071847709395,0.691259661814092,0.860454717640555,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,0,1.63757624423474,1.98950775161368,0,0,0,0.452888530700021,0.0771741581079447,0.218559560503957,0,0,0,5.10402014498858,2.37637120261669,6.7624916413344,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,6.73696040811821,0,4.89538729374586,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,7.46252495512901,9.20553663170868,1.70587185520785,2.85677317756488,0,0,0,0.445530107947154,0.606351566874658,0,0,0.0673520530145875,4.51849893973861,0.665320713092027,0,0,0,0,0,0,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p6@USP2 | |||
}} |
Latest revision as of 03:41, 16 September 2015
Short description: | p6@USP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_USP2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 21bp_to_ENST00000531070_5end |
EntrezGene: | USP2 |
HGNC: | 12618 |
UniProt: | E9PSH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data