FFCP PHASE1:Hg19::chr11:13140248..13140253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:13140248..13140253,+ | |||
|description=CAGE_peak_at_chr11:13140248..13140253,+ | |||
|id=chr11:13140248..13140253,+ | |||
|ontology_enrichment_celltype=CL:0000220!8.44e-17!246;CL:0002321!2.48e-16!248;CL:0000548!1.15e-15!679;CL:0000004!1.15e-15!679;CL:0000255!1.15e-15!679;CL:0000012!3.37e-15!682;CL:0000066!3.40e-14!254;CL:0000055!2.35e-12!180;CL:0002620!3.23e-10!23;CL:0000003!8.60e-10!722;CL:0000144!2.13e-08!625;CL:0000057!4.98e-08!75;CL:0002076!1.65e-07!43;CL:0002371!1.90e-07!591;CL:0000063!2.78e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.69e-11;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.58e-11,23;CL:0000057,2.87e-09,76;CL:0002551,9.03e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.07e-09!239;DOID:162!4.75e-09!235;DOID:0050687!6.96e-09!143;DOID:193!2.02e-08!29;DOID:120!2.54e-08!27;DOID:305!2.73e-08!106;DOID:2394!1.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:193;2.08e-07;29!DOID:2394;7.56e-07;14!DOID:120;9.23e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:193,2.06e-07,29;DOID:2394,7.14e-07,14;DOID:120,9.32e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.81e-10!40;UBERON:0002199!8.80e-10!45;UBERON:0002416!8.80e-10!45;UBERON:0003102!7.34e-08!95;UBERON:0000914!7.56e-08!83;UBERON:0002329!7.56e-08!83;UBERON:0003077!7.56e-08!83;UBERON:0003059!7.56e-08!83;UBERON:0007282!7.56e-08!83;UBERON:0009618!7.56e-08!83;UBERON:0007285!7.56e-08!83;UBERON:0005256!5.42e-07!143;UBERON:0002067!5.51e-07!9;UBERON:0004016!5.51e-07!9;UBERON:0010083!5.51e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.13e-08;9!UBERON:0002097;3.32e-08;41!UBERON:0002199;1.93e-07;46!UBERON:0002416;1.93e-07;46!UBERON:0003102;5.61e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.80e-11,46;UBERON:0002416,2.80e-11,46;UBERON:0002097,1.60e-10,41;UBERON:0002067,8.35e-09,9;UBERON:0004016,8.35e-09,9;UBERON:0010083,8.35e-09,9 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,2.79120467188971,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,1.42800483870977,0.940364164434263,0,1.09499540058307,0.376627918784408,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0.144846518960824,0,0.486634870302636,0,1.10864698731282,1.14185221401064,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,1.8809546988313,0.258416759169329,0,0,0,0,0,0,0,0,0.44905874525234,0.788280363383256,4.5994991239765,0,0.916008719652036,0,0,0,0,0,2.1185468930115,2.0078563452417,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.817309515567294,0,0,0,2.18512053781224,0.570471821544449,1.34503812496621,1.87895197830024,1.29498355494505,1.54495887372473,0,1.35117749042945,0.103325781175765,0,0,0,0,0.168336113954066,0.625592599359821,0,0.877955241761676,0.919463387397059,0.150238058906597,0,5.38168907066586,0,0.423863802319124,2.10063767259082,0.103052529238439,1.28820270022815,0.18611685633159,2.19409231913646,0.292311015483596,7.57301322732343,0.276149695926898,0,1.42003837006646,0.604512589365842,1.3564847384839,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,4.69348596989448,0.643240938192885,4.14404764057442,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0.441175890929576,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.603173834469785,0.185176890317059,0,2.07986957055916,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0.425325291727159,1.07470227243418,1.16253575405585,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,1.04007436911366,0.514414748524284,11.3479305618623,4.26275486425759,0,0,9.05564370458846,0,0,5.543663110534,0.301439377059586,0,0.899756920638513,0,0,0,0,0,0,0,0.410952645100767,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.315404830067869,0.468565659970853,0,0,0,1.99267679560631,1.10621501125022,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0.160853921143607,1.48418066444991,2.15893571323718,2.30830242907065,1.31403449622095,0.519254429183621,2.44041794765914,0.120859449591622,0.40101294060657,0.0920809889358963,0,0,0,0,0,4.70609861506113,2.92278449306521,0.316654886678627,0,0.510281115829547,0.863663664408557,0,0,0.501689773854853,0.254876273045038,2.49322802678617,3.35812132083267,0,0,0.256450125116389,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,1.3864375540318,1.38153307253517,2.48105830472155,0,0.580066775656914,1.27839941124151,0.0890320356467374,0.165284915360978,0.384380134730212,3.31793052485919,0.50578890427775,0,0.94443704049192,1.3940745403212,0.308033580176089,0,0,0,0.286249773483982,0,0,0.571890581771475,0.255897791311334,0,0,1.56989728039846,0,0.823611089208164,1.41374882814824,0,0,0.842516912477962,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,1.239293992399,1.69017361519345,1.00387946542836,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.384888450902048,2.68120910214315,8.71127878890581,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,5.96685908293468,0,0,0,0,0,0.779160935160341,0,0,0,0,0,0.102268682502155,0,0,3.23526064130377,0,0,0,0,4.44547960578548,0.969332746095218,0,0,0,0,0,0.910347586283997,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,2.05095700524602,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0.19606253431774,0,0.569261198172555,0,1.05499032264014,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0.300646838828985,0,0,0.661983911750998,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.293977192243133,2.26353937109047,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,8.3595574034518,8.34601369152557,0,0,0.240476460754601,0,1.59847687665704,0.288180834308212,0,0.857974989309823,0.720273989940749,0.621262677827163,0.707082103850386,6.11568927331263,5.54395085455366,6.62988414636092,0.866851769704557,0,0,0,4.72741985561953,2.10309883423452,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0.316801009558219,0,1.34340638123612,0,0,0,0,0,0.326587360109409,2.39460383124975,0,1.87426823963964,3.39936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,3.99937305478741,0.151649117541648,0.570930667089935,0.470531639396343,0,0,1.04478362020812,0.701139929541673,2.77402930751307,1.13641803165053,0.251567901752575,0,0.228840068396924,0,1.86524640699337,0.147855149989634,0.796483835818512,0,1.08684069813382,1.24411862352257,0.265841714557995,1.5652351854352,3.00515217994437,3.42724690951916,2.84809513243263,2.36403256963327,0.644463342254931,0.928067519756987,2.78667122089031,2.80019435264208,0,0.336749488765919,0,0.192619830407303,0.643324774124777,0,1.13352962756136,1.85217979459067,0.489473409012935,1.4327107286519,0,0.877136198314828,1.76689145945881,3.66536672714738,3.20990637240838,1.53744911152768,0,0.303859956177382,0,0,0,0,2.29326894192489,2.21195617878347,3.16968185037941,0.19998739585493,0,0,5.67515953566836,1.28874165176289,0.279759015438889,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0.954013051960256,0,0,0.705351887381368,0.3062454773532,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0.11796972334774,2.20114318226015,3.00366731990879,1.1441462864015,0,0.397832444232549,0,0.40341013740704,0,0,3.43921026771203,2.51355346568977,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,1.89110145414349,0.667388411352415,0,0,0,0,0.863710364874486,0.47775168788705,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,1.30165200803622,0.596493833314104,0,1.60374807980835,5.58371494195776,0.955538938977433,0.447421727191169,0,0.365753774946808,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.849635573439084,0,0,0,0,8.4694769211766,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,2.27099564703142,0.764859003745869,0.126698501011437,0,0.26721740526556,0,0,0,0,0,0,0,0,0.0645889098360061,0,18.3896254632206,0,0,0.217716747896961,0,0,0,0,2.36069478971826,0.320182037633146,3.8614456457388,0.538951212639521,0,0,0,0,0,0 | |||
|short_description=p@chr11:13140248..13140253,+ | |||
}} |
Latest revision as of 20:03, 23 July 2015
Short description: | p@chr11:13140248..13140253, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:13140248..13140253, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.58e-11 | 23 |
fibroblast | 2.87e-09 | 76 |
fibroblast of dermis | 9.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 2.80e-11 | 46 |
integumental system | 2.80e-11 | 46 |
skin of body | 1.60e-10 | 41 |
dermis | 8.35e-09 | 9 |
dermatome | 8.35e-09 | 9 |
future dermis | 8.35e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 2.06e-07 | 29 |
ovarian cancer | 7.14e-07 | 14 |
female reproductive organ cancer | 9.32e-07 | 27 |