FFCP PHASE1:Hg19::chr11:18548385..18548387,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7251 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15971 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000542488_5end | |||
|cluster_id=chr11:18548385..18548387,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_TSG101_5end | |||
|id=chr11:18548385..18548387,- | |||
|ontology_enrichment_celltype=CL:0002057!2.43e-21!42;CL:0000860!1.65e-20!45;CL:0000766!2.09e-19!76;CL:0002194!9.69e-15!63;CL:0000576!9.69e-15!63;CL:0000040!9.69e-15!63;CL:0000559!9.69e-15!63;CL:0002009!1.21e-14!65;CL:0000839!1.39e-14!70;CL:0000557!2.17e-14!71;CL:0000763!1.31e-10!112;CL:0000049!1.31e-10!112;CL:0000738!5.28e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.22e-64;33!CL:0002057;8.22e-64;33!CL:0000473;1.75e-42;39!CL:0000234;1.75e-42;39!CL:0000576;1.94e-28;48!CL:0000766;8.12e-26;69!CL:0000094;1.30e-17;8!CL:0000081;7.80e-17;11!CL:0000775;2.85e-13;3!CL:0000763;1.59e-10;100!CL:0000771;7.68e-09;2!CL:0002087;8.96e-08;104!CL:0000738;2.76e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-57,42;CL:0002057,1.62e-57,42;CL:0000766,1.22e-54,72;CL:0000473,1.74e-49,48;CL:0000234,1.74e-49,48;CL:0000839,2.86e-39,66;CL:0000557,1.38e-38,67;CL:0002194,3.03e-38,59;CL:0000576,3.03e-38,59;CL:0000040,3.03e-38,59;CL:0000559,3.03e-38,59;CL:0002009,8.55e-37,61;CL:0000763,7.87e-34,108;CL:0000049,7.87e-34,108;CL:0000738,3.24e-25,136;CL:0002032,4.74e-20,161;CL:0000837,4.74e-20,161;CL:0000037,7.02e-19,168;CL:0000988,8.57e-19,177;CL:0002031,1.34e-18,120;CL:0000094,1.52e-17,8;CL:0000081,1.10e-16,11;CL:0002087,1.32e-16,115;CL:0000775,3.05e-13,3;CL:0000771,6.73e-09,2;CL:0000134,8.63e-08,354;CL:0002320,1.79e-07,361;CL:0000034,2.18e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-40;42!CL:0000049;2.09e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.16e-11!80;UBERON:0004765!7.76e-11!101;UBERON:0001434!7.76e-11!101;UBERON:0002193!1.29e-10!112;UBERON:0001474!1.36e-10!86;UBERON:0002390!1.65e-09!102;UBERON:0003061!1.65e-09!102;UBERON:0002405!1.99e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.04e-33,76;UBERON:0001474,2.51e-30,82;UBERON:0004765,4.88e-27,90;UBERON:0002390,3.13e-26,98;UBERON:0003061,3.13e-26,98;UBERON:0002405,5.97e-26,93;UBERON:0001434,1.16e-23,100;UBERON:0002193,3.69e-23,108;UBERON:0002204,1.45e-12,167;UBERON:0003081,5.28e-10,203;UBERON:0002384,4.83e-07,371 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.246301768349837,0.0787107813136792,0.786728553697808,0.383829398097213,1.23852898652861,0,0,0.369754010166788,0.0774672005803016,0,0,0.553995408531877,2.20598892217156,0.868043482863407,0.223915474239924,0,0,1.30858414901608,3.40088349319928,0,1.62700325833979,1.6446715520873,1.23882548358041,2.3015391385772,1.7931249457037,1.89185783910868,2.41321976515633,3.22742341791913,4.06279459783025,0.376484679085209,3.82068610080984,1.34834090667051,4.59125838556354,3.85114832491312,1.91801137739712,0.329851300186716,2.79249120670285,1.27867425159808,4.35313857942876,5.10646702222026,2.4912889959823,1.25624332628372,0,1.73751075764093,0.605399502633369,6.2607198117886,3.16462387440884,0.845021145247767,0,0.838634582033504,0.673971786878971,0.450530678524519,0.32145117339416,0.570025487482497,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,1.0843174571537,0,0.724232594804119,0,0,0.189069634328136,0,0.175669571386252,0.196468613246569,0.364295288292542,0,0,0.174129737299267,0.664789802594326,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.838998872419812,0.275118041940067,0,0.516833518338658,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,0.24406205754817,0.367663080345869,0,0.446498641420399,0,0.450445921933289,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.662045904066094,0,0,0.560677600142307,0,0.24666754841716,0,0.67355336034844,0.163461903113459,0,0.576175924479999,0,0,0,0.448346041655403,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.45071417671979,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0.337552664482532,0.389748020644795,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0.503760491138201,0,0.57978255948989,0.818238361772504,1.43402297694502,0.243947412259191,0.132529768321485,0.232387885739037,0.518305275076852,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0,0.404493924480493,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0,0.587043471179108,0.577465791044295,0.925971025153221,0.570762456703795,0,0,0,0.468008530278475,0.297262324577456,0.93733833986777,0.335964256397719,0.283550194484773,0.358234090811393,0.290633938513962,0,1.47798971368783,1.23267807618516,0,0.144119953416961,0.12624243342638,0.317489471460845,0,0,0,0.205654985406647,0.901029173531752,0.571652865261156,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0.197030760201927,0.215627574859517,0.385029108839245,0.508189248444927,0,2.31986643833309,0.167516265334349,1.27587750330633,2.24702107184155,5.9832291840805,7.0450637284126,0.36807447515742,0,0.271265023699736,0,0.535286966391485,0.157702415033935,0,0,0,1.03473071292505,0,0.184369168541703,0.434418072340414,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0.604780586659361,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0.846016147141356,0,0.184161977871793,0.34444334449382,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0.574265537996172,1.95018073810956,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0.330569830721956,0.384380134730212,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.409499734223957,0.424216295861138,0,0,0,1.31535265576129,0,0,0.405820753925408,0,0.281695602532241,0.286822704408103,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,1.68471475667626,0.443430153536676,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0.2807971781134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| |||
|short_description=p5@TSG101 | |||
}} |
Latest revision as of 02:53, 17 September 2015
Short description: | p5@TSG101 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TSG101_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -17bp_to_ENST00000542488_5end |
EntrezGene: | TSG101 |
HGNC: | 15971 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.62e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-57 | 42 |
myeloid leukocyte | 1.22e-54 | 72 |
defensive cell | 1.74e-49 | 48 |
phagocyte | 1.74e-49 | 48 |
myeloid lineage restricted progenitor cell | 2.86e-39 | 66 |
granulocyte monocyte progenitor cell | 1.38e-38 | 67 |
monopoietic cell | 3.03e-38 | 59 |
monocyte | 3.03e-38 | 59 |
monoblast | 3.03e-38 | 59 |
promonocyte | 3.03e-38 | 59 |
macrophage dendritic cell progenitor | 8.55e-37 | 61 |
myeloid cell | 7.87e-34 | 108 |
common myeloid progenitor | 7.87e-34 | 108 |
leukocyte | 3.24e-25 | 136 |
hematopoietic oligopotent progenitor cell | 4.74e-20 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-20 | 161 |
hematopoietic stem cell | 7.02e-19 | 168 |
hematopoietic cell | 8.57e-19 | 177 |
hematopoietic lineage restricted progenitor cell | 1.34e-18 | 120 |
granulocyte | 1.52e-17 | 8 |
blood cell | 1.10e-16 | 11 |
nongranular leukocyte | 1.32e-16 | 115 |
neutrophil | 3.05e-13 | 3 |
eosinophil | 6.73e-09 | 2 |
mesenchymal cell | 8.63e-08 | 354 |
connective tissue cell | 1.79e-07 | 361 |
stem cell | 2.18e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.04e-33 | 76 |
bone element | 2.51e-30 | 82 |
skeletal element | 4.88e-27 | 90 |
hematopoietic system | 3.13e-26 | 98 |
blood island | 3.13e-26 | 98 |
immune system | 5.97e-26 | 93 |
skeletal system | 1.16e-23 | 100 |
hemolymphoid system | 3.69e-23 | 108 |
musculoskeletal system | 1.45e-12 | 167 |
lateral plate mesoderm | 5.28e-10 | 203 |
connective tissue | 4.83e-07 | 371 |