FFCP PHASE1:Hg19::chr11:57157382..57157430,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9362 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_uc001njz.2_5end | |||
|cluster_id=chr11:57157382..57157430,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_2_at_PRG2_5end | |||
|id=chr11:57157382..57157430,- | |||
|ontology_enrichment_celltype=CL:0002541!3.89e-23!3;CL:0000764!2.59e-15!2;CL:0000765!2.59e-15!2;CL:0000050!2.59e-15!2;CL:0000038!2.59e-15!2;CL:0000558!2.59e-15!2;CL:0000547!2.59e-15!2;CL:0000549!2.59e-15!2;CL:0000550!2.59e-15!2;CL:0000552!2.59e-15!2;CL:0002274!3.39e-13!5;CL:0000457!3.39e-13!5;CL:0002191!3.39e-13!5;CL:0000097!3.39e-13!5;CL:0000831!3.39e-13!5;CL:0002028!3.39e-13!5;CL:0002127!3.79e-08!1;CL:0000914!3.79e-08!1;CL:0000911!3.79e-08!1;CL:0000814!3.79e-08!1;CL:0002042!3.79e-08!1;CL:0002039!3.79e-08!1;CL:0002040!3.79e-08!1;CL:0002041!3.79e-08!1;CL:0000163!1.49e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.81e-34;3!CL:0000349;1.45e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.81e-34,3;CL:0000349,1.45e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.23e-26;1 | |||
|ontology_enrichment_disease=DOID:8552!7.01e-09!1;DOID:225!9.46e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:8552;5.23e-26;1!DOID:225;1.11e-25;1!DOID:74;1.46e-13;2!DOID:1287;1.98e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,4.61e-26,1;DOID:225,1.26e-25,1;DOID:74,1.55e-13,2;DOID:1287,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.89e-23!3;UBERON:0000920!3.89e-23!3;UBERON:0003124!2.26e-17!7;UBERON:0005631!2.93e-13!14;UBERON:0000158!2.93e-13!14;UBERON:0002370!9.19e-08!4;UBERON:0005058!9.19e-08!4;UBERON:0009113!9.19e-08!4;UBERON:0003295!9.19e-08!4;UBERON:0005562!9.19e-08!4;UBERON:0000478!1.23e-07!24;UBERON:0000974!8.99e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.81e-34;3!UBERON:0000920;2.81e-34;3!UBERON:0005631;3.52e-23;10!UBERON:0000158;3.52e-23;10!UBERON:0000478;4.33e-17;24!UBERON:0001987;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.81e-34,3;UBERON:0003124,1.21e-32,7;UBERON:0005631,7.28e-29,14;UBERON:0000158,7.28e-29,14;UBERON:0000478,4.43e-17,24;UBERON:0001987,1.69e-07,4;UBERON:0004340,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.63982351160608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.359186716839,0.641183153813036,74.0918338665902,0,2.82564461511045,3.8228686837036,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45939243634291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PRG2 | |||
}} |
Latest revision as of 09:21, 18 September 2015
Short description: | p2@PRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRG2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 13bp_to_uc001njz.2_5end |
EntrezGene: | PRG2 |
HGNC: | 9362 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.81e-34 | 3 |
extraembryonic cell | 1.45e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.81e-34 | 3 |
chorion | 1.21e-32 | 7 |
extraembryonic membrane | 7.28e-29 | 14 |
membranous layer | 7.28e-29 | 14 |
extraembryonic structure | 4.43e-17 | 24 |
placenta | 1.69e-07 | 4 |
allantois | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 4.61e-26 | 1 |
syndrome | 1.26e-25 | 1 |
hematopoietic system disease | 1.55e-13 | 2 |
cardiovascular system disease | 2.04e-07 | 4 |