FFCP PHASE1:Hg19::chr12:131118436..131118449,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENST00000541840_5end | |||
|cluster_id=chr12:131118436..131118449,- | |||
|coexpression_cluster_id=C3255 | |||
|description=CAGE_peak_2_at_ENST00000541840_5end | |||
|id=chr12:131118436..131118449,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.19e-12;2!CL:0000242;4.19e-12;2!CL:0000540;2.20e-08;6!CL:0000404;2.20e-08;6!CL:0002553;9.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.68e-12,2;CL:0000047,1.04e-10,8;CL:0000540,2.21e-08,6;CL:0000031,2.21e-08,6;CL:0000404,2.21e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.20e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.30e-08;6!DOID:0050619;4.85e-07;1!DOID:1357;4.85e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.18e-08,6;DOID:0050619,4.85e-07,1;DOID:1357,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.28e-50!94;UBERON:0001016!7.28e-50!94;UBERON:0001049!2.85e-49!57;UBERON:0005068!2.85e-49!57;UBERON:0006241!2.85e-49!57;UBERON:0007135!2.85e-49!57;UBERON:0001017!2.99e-48!82;UBERON:0005743!2.40e-47!86;UBERON:0002780!1.02e-42!41;UBERON:0001890!1.02e-42!41;UBERON:0006240!1.02e-42!41;UBERON:0002616!4.84e-42!59;UBERON:0000955!4.97e-42!69;UBERON:0006238!4.97e-42!69;UBERON:0003080!1.77e-41!42;UBERON:0002020!9.06e-37!34;UBERON:0003528!9.06e-37!34;UBERON:0001893!1.63e-36!34;UBERON:0002791!8.40e-35!33;UBERON:0001869!2.18e-33!32;UBERON:0003075!2.25e-33!86;UBERON:0007284!2.25e-33!86;UBERON:0007023!4.16e-33!115;UBERON:0002346!2.60e-31!90;UBERON:0002619!6.62e-30!22;UBERON:0003056!3.87e-29!61;UBERON:0001950!1.57e-26!20;UBERON:0000956!9.47e-26!25;UBERON:0000203!9.47e-26!25;UBERON:0004121!2.01e-23!169;UBERON:0000924!1.60e-22!173;UBERON:0006601!1.60e-22!173;UBERON:0000033!6.77e-22!123;UBERON:0000153!2.80e-20!129;UBERON:0007811!2.80e-20!129;UBERON:0000025!1.42e-13!194;UBERON:0002308!1.80e-12!9;UBERON:0000125!1.80e-12!9;UBERON:0002420!2.19e-12!9;UBERON:0007245!2.19e-12!9;UBERON:0010009!2.19e-12!9;UBERON:0010011!2.19e-12!9;UBERON:0000454!2.19e-12!9;UBERON:0002298!8.59e-12!8;UBERON:0000200!1.06e-11!6;UBERON:0001871!1.44e-11!7;UBERON:0000349!3.03e-10!5;UBERON:0003296!2.06e-09!4;UBERON:0010133!2.06e-09!4;UBERON:0003076!3.06e-09!15;UBERON:0003057!3.06e-09!15;UBERON:0000064!3.30e-09!219;UBERON:0009663!5.28e-09!7;UBERON:0004732!1.22e-08!13;UBERON:0004111!2.09e-08!241;UBERON:0001894!1.58e-07!7;UBERON:0006222!1.58e-07!7;UBERON:0000483!2.19e-07!309;UBERON:0004733!3.29e-07!12;UBERON:0002028!3.29e-07!12;UBERON:0007277!3.29e-07!12;UBERON:0000119!3.47e-07!312;UBERON:0006331!6.10e-07!3;UBERON:0001896!6.61e-07!3;UBERON:0005290!6.61e-07!3;UBERON:0010096!6.61e-07!3;UBERON:0001872!7.24e-07!5;UBERON:0000988!9.84e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.60e-13;4!UBERON:0010133;2.60e-13;4!UBERON:0000007;1.54e-12;2!UBERON:0000073;5.17e-08;53!UBERON:0002616;5.17e-08;53!UBERON:0002780;7.02e-08;41!UBERON:0001890;7.02e-08;41!UBERON:0001894;8.63e-08;7!UBERON:0002619;1.76e-07;22!UBERON:0001764;4.85e-07;1!UBERON:0001825;4.85e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.00e-20,89;UBERON:0001017,2.06e-16,81;UBERON:0003296,2.61e-13,4;UBERON:0010133,2.61e-13,4;UBERON:0001049,8.51e-13,56;UBERON:0005068,8.51e-13,56;UBERON:0006241,8.51e-13,56;UBERON:0007135,8.51e-13,56;UBERON:0000007,1.55e-12,2;UBERON:0000073,1.57e-11,53;UBERON:0002616,1.57e-11,53;UBERON:0011216,4.10e-11,223;UBERON:0004121,5.96e-11,171;UBERON:0000924,5.96e-11,171;UBERON:0006601,5.96e-11,171;UBERON:0002780,1.33e-10,41;UBERON:0001890,1.33e-10,41;UBERON:0003080,1.33e-10,41;UBERON:0006240,1.33e-10,41;UBERON:0000955,5.98e-10,68;UBERON:0006238,5.98e-10,68;UBERON:0003075,2.26e-09,82;UBERON:0007284,2.26e-09,82;UBERON:0010371,2.48e-09,104;UBERON:0002346,8.20e-09,86;UBERON:0003056,4.65e-08,61;UBERON:0001894,8.64e-08,7;UBERON:0006222,8.64e-08,7;UBERON:0002619,2.04e-07,22;UBERON:0001764,4.85e-07,1;UBERON:0001825,4.85e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,1.54657762555539,1.34013012267479,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.19924798825107,0,9.82537716631677,0.511343412510774,0,0,0,0.179021174675609,0,0,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.823040347426423,0,0,0,0,0,0,13.8991948268191,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.338693328263138,1.59045937961861,0.408610218334727,0,0,0,0,0,1.51873891645062,0,1.26089131678717,4.09145787452985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,2.24795422962573,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4747079350291,0.886068179966986,0.610131324509816,0.751145584238999,0.573409195690071,0.887432412294818,1.98708489412427,0,0,0,0,0,6.08835377548946,6.23160423026548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,1.72519698234691,0,10.0472867136653,0,0,0,0,0,0,3.20228299314188,0,0,0.642292250964595,0,0.159633859057151,0.41023272848151,1.00828678488687,0.345786262321089,1.13032951942296,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.08060135389431,0,1.2401207790071,0.380494861163441,1.64092442705466,0,0,0,0,0.535701835878287,3.36283722218824,33.9900738372514,39.1578969124232,0,0,0,0.271878931907327,0.920818829879887,0,0,0,0.157115589916002,0,1.82631744101899,0,0,0.214429632529969,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,6.78424444040106,6.56537558032515,0,8.80979439903888,0.109940516745429,0.452888530700021,0.463044948647668,0,21.6345956326301,0,2.12108892391463,1.76677620403451,0.594092800654172,0,0,0,0,0,0,0,0,1.46067277649303,0,0.716697915757256,0,1.15585533324555,0.872701380680755,4.7612415646386,0,0,0,0,0,0,0,0.801652215796681,0.18378979906969,0.250707539292375,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0.320568492303233 | |||
|short_description=p2@ENST00000541840 | |||
}} |
Latest revision as of 06:45, 24 July 2015
Short description: | p2@ENST00000541840 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000541840_5end |
Coexpression cluster: | C3255_pituitary_smallcell_maxillary_neuroblastoma_argyrophil_gastrointestinal_small |
Association with transcript: | -30bp_to_ENST00000541840_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.68e-12 | 2 |
neuronal stem cell | 1.04e-10 | 8 |
neuron | 2.21e-08 | 6 |
neuroblast | 2.21e-08 | 6 |
electrically signaling cell | 2.21e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.00e-20 | 89 |
central nervous system | 2.06e-16 | 81 |
gland of diencephalon | 2.61e-13 | 4 |
neuroendocrine gland | 2.61e-13 | 4 |
neural tube | 8.51e-13 | 56 |
neural rod | 8.51e-13 | 56 |
future spinal cord | 8.51e-13 | 56 |
neural keel | 8.51e-13 | 56 |
pituitary gland | 1.55e-12 | 2 |
regional part of nervous system | 1.57e-11 | 53 |
regional part of brain | 1.57e-11 | 53 |
organ system subdivision | 4.10e-11 | 223 |
ectoderm-derived structure | 5.96e-11 | 171 |
ectoderm | 5.96e-11 | 171 |
presumptive ectoderm | 5.96e-11 | 171 |
regional part of forebrain | 1.33e-10 | 41 |
forebrain | 1.33e-10 | 41 |
anterior neural tube | 1.33e-10 | 41 |
future forebrain | 1.33e-10 | 41 |
brain | 5.98e-10 | 68 |
future brain | 5.98e-10 | 68 |
neural plate | 2.26e-09 | 82 |
presumptive neural plate | 2.26e-09 | 82 |
ecto-epithelium | 2.48e-09 | 104 |
neurectoderm | 8.20e-09 | 86 |
pre-chordal neural plate | 4.65e-08 | 61 |
diencephalon | 8.64e-08 | 7 |
future diencephalon | 8.64e-08 | 7 |
regional part of cerebral cortex | 2.04e-07 | 22 |
maxillary sinus | 4.85e-07 | 1 |
paranasal sinus | 4.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.18e-08 | 6 |
paranasal sinus cancer | 4.85e-07 | 1 |
maxillary sinus cancer | 4.85e-07 | 1 |