FFCP PHASE1:Hg19::chr12:5590430..5590495,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:5590430..5590495,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr12:5590430..5590495,+ | |||
|id=chr12:5590430..5590495,+ | |||
|ontology_enrichment_celltype=CL:0002620!6.90e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.50e-16;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.47e-16,23 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.25e-15;3 | |||
|ontology_enrichment_disease=DOID:17!5.04e-07!5;DOID:450!5.04e-07!5;DOID:66!5.04e-07!5;DOID:423!5.04e-07!5;DOID:0080000!5.04e-07!5;DOID:11722!5.04e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.56e-09;5!DOID:450;1.56e-09;5!DOID:66;1.56e-09;5!DOID:423;1.56e-09;5!DOID:0080000;1.56e-09;5!DOID:11722;1.56e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.34e-09,5;DOID:450,1.34e-09,5;DOID:66,1.34e-09,5;DOID:423,1.34e-09,5;DOID:0080000,1.34e-09,5;DOID:11722,1.34e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-08!82;UBERON:0005743!1.73e-08!86;UBERON:0000033!3.94e-08!123;UBERON:0000153!4.52e-08!129;UBERON:0007811!4.52e-08!129;UBERON:0000955!8.33e-08!69;UBERON:0006238!8.33e-08!69;UBERON:0002097!1.96e-07!40;UBERON:0000073!2.71e-07!94;UBERON:0001016!2.71e-07!94;UBERON:0000924!3.42e-07!173;UBERON:0006601!3.42e-07!173;UBERON:0004121!6.98e-07!169;UBERON:0002199!8.61e-07!45;UBERON:0002416!8.61e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.48e-11;2!UBERON:0002757;1.48e-11;2!UBERON:0010134;1.48e-11;2!UBERON:0005408;1.48e-11;2!UBERON:0001899;1.48e-11;2!UBERON:0002037;8.80e-08;6!UBERON:0002097;2.54e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.48e-11,2;UBERON:0002757,1.48e-11,2;UBERON:0010134,1.48e-11,2;UBERON:0005408,1.48e-11,2;UBERON:0001899,1.48e-11,2;UBERON:0002097,3.63e-10,41;UBERON:0002199,7.37e-09,46;UBERON:0002416,7.37e-09,46;UBERON:0002037,6.97e-08,6;UBERON:0006215,6.97e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.662045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,15.7862879406199,1.49490172172997,0.635795703478686,4.20127534518163,0.721367704669072,6.1833729610951,1.48893485065272,2.19409231913646,0.292311015483596,8.83518209854401,0.828449087780694,0.484938170456436,5.68015348026583,0.705264687593482,0.339121184620975,0,0.272746120590835,0,0.365921118388786,0.265059536642971,0,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,2.95394953340702,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0,1.03417372606222,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0.771048469013278,0,0.0821271560138091,0,0,0.966875596732978,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.824125183365091,0.742585499285292,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,1.52581736317083,10.0627126537414,1.47773809476774,0,0,0.697118721393016,0.307801034015188,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.282706142867882,0,0,0,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,0,0.951329442515298,1.46443984837266,0.407992870545287,0,0,0.136905378891993,0,0,0,0.279282401272254,1.60412296808179,0,0,0,0,0.268733889946905,0.360299883542404,1.16495949527454,0,0,0,0.196854963029498,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0.573409195690071,0.665574309221114,0.124192805882767,16.6018361923477,0.124980407962107,0,0,0,0.468334905806882,1.30428925749743,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0.265841714557995,1.04349012362347,0,2.28483127301277,1.22061219961398,0.363697318405119,0.214821114084977,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,3.18040462702586,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0.318004350653419,0,0,0,0,0.0642292250964595,1.41696576325585,0.478901577171454,0,1.00828678488687,0,0.322951291263702,0,0,0,0.183428598521679,0.346576998451015,0,0,1.39241355481392,0.225630985047772,0.40341013740704,0,0,0,0,0,0,0,0,0.546974809018219,0,3.96968942711435,0,0,18.74956425574,19.8407396109106,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.500335809236594,1.42212250559454,0,4.17259853526191,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0,0.9164274741762,0,0,2.12525320415805,0,0,0,0,0,0.971421986118279,0.467878926924211,0.198950775161368,0,0,2.6385724018903,0.452888530700021,0.463044948647668,0.218559560503957,0,0.490296643507811,0,0,0,0.4226557275834,1.0195626881269,0.187967835959707,0.128915775947154,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,1.5870805215462,0,0,0.865253124247578,1.13549782351571,0.109265571963696,2.91406552326305,0,0,0.459474497674225,0.250707539292375,0,0.267964130156178,0,0,0.213233981900981,0,0,0.124149428591716,0.112131862580613,0,0.202117188958219,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0.213454691755431,1.9307228228694,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p@chr12:5590430..5590495,+ | |||
}} |
Latest revision as of 10:08, 24 July 2015
Short description: | p@chr12:5590430..5590495, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:5590430..5590495, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.47e-16 | 23 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.48e-11 | 2 |
regional part of epithalamus | 1.48e-11 | 2 |
secretory circumventricular organ | 1.48e-11 | 2 |
circumventricular organ | 1.48e-11 | 2 |
epithalamus | 1.48e-11 | 2 |
skin of body | 3.63e-10 | 41 |
integument | 7.37e-09 | 46 |
integumental system | 7.37e-09 | 46 |
cerebellum | 6.97e-08 | 6 |
rhombic lip | 6.97e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.34e-09 | 5 |
myotonic disease | 1.34e-09 | 5 |
muscle tissue disease | 1.34e-09 | 5 |
myopathy | 1.34e-09 | 5 |
muscular disease | 1.34e-09 | 5 |
myotonic dystrophy | 1.34e-09 | 5 |