FFCP PHASE1:Hg19::chr12:56567551..56567562,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:56567551..56567562,- | |||
|description=CAGE_peak_at_chr12:56567551..56567562,- | |||
|id=chr12:56567551..56567562,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.60e-14;3!CL:1000428;1.60e-14;3!CL:0002577;1.60e-14;3!CL:0002559;2.97e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.40e-14,3;CL:0000346,1.83e-14,3;CL:1000428,1.83e-14,3;CL:0002559,3.22e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.48e-40;1!UBERON:0007297;4.66e-21;2!UBERON:0006215;1.60e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.48e-40;1!UBERON:0006868;1.48e-40;1!UBERON:0002771;4.66e-21;2!UBERON:0000412;1.60e-14;3!UBERON:0001992;1.60e-14;3!UBERON:0006947;1.60e-14;3!UBERON:0004054;1.60e-14;3!UBERON:0001987;3.10e-11;4!UBERON:0005904;3.10e-11;4!UBERON:0002073;2.97e-09;5!UBERON:0000200;6.33e-08;6!UBERON:0002037;6.33e-08;6!UBERON:0001871;5.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.30e-40,1;UBERON:0006868,3.30e-40,1;UBERON:0002771,3.11e-21,2;UBERON:0000412,1.83e-14,3;UBERON:0001992,1.83e-14,3;UBERON:0006947,2.09e-14,3;UBERON:0004054,2.09e-14,3;UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0005904,3.79e-11,4;UBERON:0002073,3.22e-09,5;UBERON:0005086,3.22e-09,5;UBERON:0000200,5.54e-08,6;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6;UBERON:0004175,2.43e-07,25;UBERON:0001871,5.08e-07,6;UBERON:0003124,5.38e-07,7 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.547497700291537,0,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.757301322732344,0.184099797284599,0.484938170456436,0,0.201504196455281,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0,0,1.28648187638577,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0.197030760201927,0.862510299438069,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0.391602314925481,0.343143423810856,0,0.215714200818617,0.106727557803444,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0.510281115829547,0.431831832204279,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0.490080431962063,0.557409525377156,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0.228234679033192,0.47003968731907,0,0.50787533340481,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.562677665642051,0.111308705022906,0,0,0.398495976502139,0,0.755798243562828,0.20453736500431,0.123084805461069,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0.874813840149763,0.868124974666461,0,0.60298219312704,1.52581736317083,0.221158519862449,0.295547618953547,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,0,0,0.332423363800313,0.225595660617181,0,0.167821586975843,0,0.317873157960757,0.843992258112108,0.163232808159148,0.141353071433941,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0.802577647298789,0,0.547364367646998,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0.171986032471617,0,0.292357268344742,0.328461828212837,0.290967049465258,0.0882561266915003,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0,0,0.203996435272644,0,0,0.410716136675979,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0,0,0.0984274815147488,0.0846733320657845,0.795229689809303,0.272406812223151,0.321506296930038,0.137539436597234,0,0,0,0.182248669974074,0,0.236417121897595,0,0.211200673038813,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0.886068179966986,1.95242023843141,0.625954653532499,0,0.332787154610557,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0.378806010550178,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0.443565449968902,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0.800055529326307,0,0,0,0,0,0,0.906823702049089,0,0.244736704506468,0.71635536432595,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0.368211900503681,0,0,0.127894371303652,0.107824811396682,0.471797825567689,0,0,0.212574920101683,0.371807292777007,0,0,0.0788617450012534,0,0.352675943690684,0,0.0642292250964595,0,0.798169295285756,0,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.327543835020193,0.147856086217045,0.270150338473579,0,0.413373593002368,0.19024743058172,0.546974809018219,0,0.992422356778588,0.175871244359621,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0.222462803784138,0.156986185701028,0.157115589916002,0,0,0.431855182437243,0,0,0.47404083519818,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,1.27016115057279,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0.233939463462106,0.198950775161368,0.356760272332706,0,0.329821550236287,0,0.0771741581079447,0.218559560503957,0.940634592723046,0.245148321753905,0.471353094203252,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.128915775947154,0.0999411559249289,0,0,0.0802413666891683,0,0,0.430018749454354,0.157771562193185,0.0679914901909147,0.436350690340377,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0,0.253397002022874,0,0,0,0.50141507858475,0,0.535928260312357,0,0.517164979309476,0.213233981900981,0.476128862927481,0.193766729508018,0.124149428591716,0,0.12729431655633,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0.213454691755431,0,0.269475606319761,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:56567551..56567562,- | |||
}} |
Latest revision as of 10:21, 24 July 2015
Short description: | p@chr12:56567551..56567562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56567551..56567562, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.40e-14 | 3 |
hair follicle dermal papilla cell | 1.83e-14 | 3 |
stem cell of epidermis | 1.83e-14 | 3 |
hair follicle cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 3.30e-40 | 1 |
seminal fluid secreting gland | 3.30e-40 | 1 |
middle temporal gyrus | 3.11e-21 | 2 |
dermal papilla | 1.83e-14 | 3 |
papillary layer of dermis | 1.83e-14 | 3 |
male genital duct | 2.09e-14 | 3 |
internal male genitalia | 2.09e-14 | 3 |
placenta | 2.80e-11 | 4 |
allantois | 2.80e-11 | 4 |
duct of male reproductive system | 3.79e-11 | 4 |
hair follicle | 3.22e-09 | 5 |
hair follicle placode | 3.22e-09 | 5 |
gyrus | 5.54e-08 | 6 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
internal genitalia | 2.43e-07 | 25 |
temporal lobe | 5.08e-07 | 6 |
chorion | 5.38e-07 | 7 |