FFCP PHASE1:Hg19::chr12:65951524..65951527,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:65951524..65951527,+ | |||
|description=CAGE_peak_at_chr12:65951524..65951527,+ | |||
|id=chr12:65951524..65951527,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.09e-14!180;CL:0000057!1.29e-13!75;CL:0000192!3.54e-12!42;CL:0000514!3.54e-12!42;CL:0000359!3.18e-11!32;CL:0002494!2.49e-09!16;CL:0002620!2.79e-09!23;CL:0000048!7.93e-09!430;CL:0000680!1.62e-08!57;CL:0000056!1.62e-08!57;CL:0000355!1.62e-08!57;CL:0000723!1.98e-08!436;CL:0002371!2.80e-08!591;CL:0000187!2.82e-08!54;CL:0000034!6.40e-08!444;CL:0002594!7.40e-08!4;CL:0000144!1.72e-07!625;CL:0000548!2.81e-07!679;CL:0000004!2.81e-07!679;CL:0000255!2.81e-07!679;CL:0000183!3.77e-07!59;CL:0000012!3.99e-07!682;CL:0000393!5.99e-07!60;CL:0000211!5.99e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:1000306;3.26e-12;4!CL:0002547;3.26e-12;4!CL:0002262;8.52e-07;2!CL:1000398;8.52e-07;2!CL:0002589;8.52e-07;2!CL:0002588;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.47e-12,4;CL:0002547,2.47e-12,4;CL:0002589,6.07e-07,2;CL:0002262,8.06e-07,2;CL:1000398,8.06e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.35e-12!14;DOID:120!9.97e-08!27;DOID:193!5.43e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.24e-28;14!DOID:120;2.39e-14;27!DOID:193;2.46e-13;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.38e-28,14;DOID:120,2.61e-14,27;DOID:193,2.67e-13,29 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.84e-13!84;UBERON:0001981!2.09e-12!60;UBERON:0007500!2.09e-12!60;UBERON:0004537!2.09e-12!60;UBERON:0006965!2.09e-12!60;UBERON:0000055!5.66e-11!69;UBERON:0003914!2.14e-10!118;UBERON:0001637!3.86e-10!42;UBERON:0003509!3.86e-10!42;UBERON:0004572!3.86e-10!42;UBERON:0000914!3.06e-09!83;UBERON:0002329!3.06e-09!83;UBERON:0003077!3.06e-09!83;UBERON:0003059!3.06e-09!83;UBERON:0007282!3.06e-09!83;UBERON:0009618!3.06e-09!83;UBERON:0007285!3.06e-09!83;UBERON:0004535!6.58e-09!110;UBERON:0002049!1.06e-08!79;UBERON:0007798!1.06e-08!79;UBERON:0001009!1.89e-08!113;UBERON:0002066!5.91e-08!5;UBERON:0001310!7.40e-08!4;UBERON:0000486!9.60e-08!82;UBERON:0001134!1.31e-07!61;UBERON:0002036!1.31e-07!61;UBERON:0003082!1.31e-07!61;UBERON:0003102!1.53e-07!95;UBERON:0002385!3.34e-07!63;UBERON:0001015!3.34e-07!63;UBERON:0000383!3.34e-07!63;UBERON:0004573!4.22e-07!33;UBERON:0004571!4.22e-07!33;UBERON:0005256!7.85e-07!143;UBERON:0002097!9.38e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;1.47e-20;5!UBERON:0004797;3.26e-12;4!UBERON:0000415;3.26e-12;4!UBERON:0007240;3.26e-12;4!UBERON:0005742;3.26e-12;4!UBERON:0005734;3.26e-12;4!UBERON:0004664;3.26e-12;4!UBERON:0004663;3.26e-12;4!UBERON:0000992;2.92e-08;13!UBERON:0004573;1.47e-07;33!UBERON:0004571;1.47e-07;33!UBERON:0001281;8.52e-07;2!UBERON:0003497;8.52e-07;2!UBERON:0003909;8.52e-07;2!UBERON:0003835;8.52e-07;2!UBERON:0001529;8.52e-07;2!UBERON:0007204;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.02e-20,5;UBERON:0000415,2.47e-12,4;UBERON:0007240,2.47e-12,4;UBERON:0005742,2.47e-12,4;UBERON:0005734,2.47e-12,4;UBERON:0004664,2.47e-12,4;UBERON:0004663,2.47e-12,4;UBERON:0007500,1.38e-08,59;UBERON:0001981,1.38e-08,59;UBERON:0004537,1.38e-08,59;UBERON:0006965,1.38e-08,59;UBERON:0004573,2.11e-08,33;UBERON:0004571,2.11e-08,33;UBERON:0000992,2.55e-08,13;UBERON:0004797,2.02e-07,7;UBERON:0000055,2.32e-07,68;UBERON:0001529,6.07e-07,2;UBERON:0007204,6.07e-07,2;UBERON:0001281,8.06e-07,2;UBERON:0003497,8.06e-07,2;UBERON:0003909,8.06e-07,2;UBERON:0003835,8.06e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.759783069987479,7.67973248716669,1.72101972449288,0,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0.653847612453835,0,0,0,0,0,0,0.23486899728753,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.710019185033229,0,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.904318131178758,0,0.699810938274399,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0,0,0.462629081407967,0,0.246381468041427,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,5.48734663726712,0,0.929691098594572,1.25924938732256,0,0,0,0.869932992075073,0.18532421910392,1.86062352764589,0,0,0,0.255897791311334,0,0.95460974377781,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.876901770507525,0,0,0.405820753925408,0.6196469961995,0.563391205064483,1.14729081763241,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,4.67927368271232,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0,0.453692771289717,0.15543720058278,0.147855149989634,0.318593534327405,0.449803112163605,0.310525913752519,0,1.06336685823198,1.04349012362347,1.35231848097497,0.761610424337591,0,1.45478927362048,0,2.78420255927096,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,2.82387096184928,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.488419611665847,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:65951524..65951527,+ | |||
}} |
Latest revision as of 11:25, 24 July 2015
Short description: | p@chr12:65951524..65951527, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:65951524..65951527, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.47e-12 | 4 |
fibroblast of the aortic adventitia | 2.47e-12 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 6.07e-07 | 2 |
endothelial cell of sinusoid | 8.06e-07 | 2 |
endothelial cell of hepatic sinusoid | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.02e-20 | 5 |
artery wall | 2.47e-12 | 4 |
tunica adventitia of artery | 2.47e-12 | 4 |
adventitia | 2.47e-12 | 4 |
tunica adventitia of blood vessel | 2.47e-12 | 4 |
aorta tunica adventitia | 2.47e-12 | 4 |
aorta wall | 2.47e-12 | 4 |
epithelial tube open at both ends | 1.38e-08 | 59 |
blood vessel | 1.38e-08 | 59 |
blood vasculature | 1.38e-08 | 59 |
vascular cord | 1.38e-08 | 59 |
systemic artery | 2.11e-08 | 33 |
systemic arterial system | 2.11e-08 | 33 |
female gonad | 2.55e-08 | 13 |
blood vessel layer | 2.02e-07 | 7 |
vessel | 2.32e-07 | 68 |
brachiocephalic artery | 6.07e-07 | 2 |
brachiocephalic vasculature | 6.07e-07 | 2 |
hepatic sinusoid | 8.06e-07 | 2 |
abdomen blood vessel | 8.06e-07 | 2 |
sinusoid | 8.06e-07 | 2 |
abdominal segment blood vessel | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.38e-28 | 14 |
female reproductive organ cancer | 2.61e-14 | 27 |
reproductive organ cancer | 2.67e-13 | 29 |