FFCP PHASE1:Hg19::chr8:141018664..141018674,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:141018664..141018674,-
|short_description=p15@TRAPPC9
|description=CAGE_peak_15_at_TRAPPC9_5end
|association_with_transcript=13bp_to_ENST00000524162_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83696 | |EntrezGene=83696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30832 | |HGNC=30832 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000524162_5end | |||
|cluster_id=chr8:141018664..141018674,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_15_at_TRAPPC9_5end | |||
|id=chr8:141018664..141018674,- | |||
|ontology_enrichment_celltype=CL:0002553!2.89e-08!1;CL:0000167!6.10e-08!1;CL:0000164!6.10e-08!1;CL:0000502!6.10e-08!1;CL:0000172!6.10e-08!1;CL:0000173!6.10e-08!1;CL:0002351!6.10e-08!1;CL:0002563!1.44e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002553;9.91e-41;1!CL:0000082;2.17e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,9.91e-41,1;CL:0000082,2.17e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.39e-53;3 | |||
|ontology_enrichment_disease=DOID:4430!6.10e-08!1;DOID:3119!8.01e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.27e-11;15!DOID:5409;3.10e-11;4!DOID:0050615;5.84e-11;16!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.27e-11,15;DOID:5409,3.10e-11,4;DOID:0050615,5.84e-11,16;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.21e-19!57;UBERON:0005068!8.21e-19!57;UBERON:0006241!8.21e-19!57;UBERON:0007135!8.21e-19!57;UBERON:0002616!4.29e-18!59;UBERON:0001893!2.60e-16!34;UBERON:0000955!7.22e-15!69;UBERON:0006238!7.22e-15!69;UBERON:0001869!5.56e-14!32;UBERON:0001950!6.95e-14!20;UBERON:0002791!1.16e-13!33;UBERON:0002780!2.59e-13!41;UBERON:0001890!2.59e-13!41;UBERON:0006240!2.59e-13!41;UBERON:0002020!3.13e-13!34;UBERON:0003528!3.13e-13!34;UBERON:0003080!5.77e-13!42;UBERON:0002619!1.31e-12!22;UBERON:0001017!3.80e-12!82;UBERON:0003075!1.23e-11!86;UBERON:0007284!1.23e-11!86;UBERON:0005743!1.80e-11!86;UBERON:0000956!4.64e-11!25;UBERON:0000203!4.64e-11!25;UBERON:0002346!5.27e-11!90;UBERON:0007023!5.54e-11!115;UBERON:0000073!3.70e-10!94;UBERON:0001016!3.70e-10!94;UBERON:0000200!4.57e-10!6;UBERON:0004733!4.96e-09!12;UBERON:0002028!4.96e-09!12;UBERON:0007277!4.96e-09!12;UBERON:0003056!1.75e-08!61;UBERON:0004732!2.42e-08!13;UBERON:0002038!4.99e-08!1;UBERON:0009661!4.99e-08!1;UBERON:0002298!6.97e-08!8;UBERON:0002581!7.97e-08!1;UBERON:0000064!9.31e-08!219;UBERON:0001882!1.18e-07!1;UBERON:0005403!1.18e-07!1;UBERON:0001871!1.23e-07!7;UBERON:0001242!1.44e-07!4;UBERON:0001262!1.44e-07!4;UBERON:0004786!1.44e-07!4;UBERON:0004808!1.44e-07!4;UBERON:0001277!1.44e-07!4;UBERON:0007190!1.75e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0002680!2.44e-07!9;UBERON:0001895!2.44e-07!9;UBERON:0010092!2.44e-07!9;UBERON:0000033!2.73e-07!123;UBERON:0003076!3.06e-07!15;UBERON:0003057!3.06e-07!15;UBERON:0002420!5.44e-07!9;UBERON:0007245!5.44e-07!9;UBERON:0010009!5.44e-07!9;UBERON:0010011!5.44e-07!9;UBERON:0000454!5.44e-07!9;UBERON:0000153!7.75e-07!129;UBERON:0007811!7.75e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.06e-27;6!UBERON:0002680;1.76e-18;9!UBERON:0001895;1.76e-18;9!UBERON:0004733;3.84e-14;12!UBERON:0002028;3.84e-14;12!UBERON:0004732;3.87e-13;13!UBERON:0004802;2.17e-09;19!UBERON:0000115;2.17e-09;19!UBERON:0002048;3.04e-08;22!UBERON:0004807;3.04e-08;22!UBERON:0000117;3.04e-08;22!UBERON:0000171;3.04e-08;22!UBERON:0000170;3.04e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.06e-27,6;UBERON:0006215,4.06e-27,6;UBERON:0002680,1.76e-18,9;UBERON:0001895,1.76e-18,9;UBERON:0010092,1.76e-18,9;UBERON:0004733,3.84e-14,12;UBERON:0002028,3.84e-14,12;UBERON:0007277,3.84e-14,12;UBERON:0004732,3.87e-13,13;UBERON:0003076,1.58e-11,15;UBERON:0003057,1.58e-11,15;UBERON:0004802,2.17e-09,19;UBERON:0000115,2.17e-09,19;UBERON:0002048,3.04e-08,22;UBERON:0000117,3.04e-08,22;UBERON:0000171,3.04e-08,22;UBERON:0000170,3.04e-08,22;UBERON:0005597,3.04e-08,22;UBERON:0000118,3.04e-08,22 | |||
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|short_description=p15@TRAPPC9 | |||
}} | }} |
Latest revision as of 18:57, 16 September 2015
Short description: | p15@TRAPPC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TRAPPC9_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 13bp_to_ENST00000524162_5end |
EntrezGene: | TRAPPC9 |
HGNC: | 30832 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 9.91e-41 | 1 |
epithelial cell of lung | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.06e-27 | 6 |
rhombic lip | 4.06e-27 | 6 |
regional part of metencephalon | 1.76e-18 | 9 |
metencephalon | 1.76e-18 | 9 |
future metencephalon | 1.76e-18 | 9 |
segmental subdivision of hindbrain | 3.84e-14 | 12 |
hindbrain | 3.84e-14 | 12 |
presumptive hindbrain | 3.84e-14 | 12 |
segmental subdivision of nervous system | 3.87e-13 | 13 |
posterior neural tube | 1.58e-11 | 15 |
chordal neural plate | 1.58e-11 | 15 |
respiratory tract epithelium | 2.17e-09 | 19 |
lung epithelium | 2.17e-09 | 19 |
lung | 3.04e-08 | 22 |
respiratory tube | 3.04e-08 | 22 |
respiration organ | 3.04e-08 | 22 |
pair of lungs | 3.04e-08 | 22 |
lung primordium | 3.04e-08 | 22 |
lung bud | 3.04e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.27e-11 | 15 |
lung small cell carcinoma | 3.10e-11 | 4 |
respiratory system cancer | 5.84e-11 | 16 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |