FFCP PHASE1:Hg19::chr13:46716969..46716977,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |||
|TSSclassifier=strong | |||
|UniProt=B4DUA0 | |||
|association_with_transcript=37bp_to_ENST00000435666,uc010ack.2_5end | |||
|cluster_id=chr13:46716969..46716977,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_49_at_LCP1_5end | |||
|id=chr13:46716969..46716977,- | |||
|ontology_enrichment_celltype=CL:0000181!1.14e-20!12;CL:0000417!1.14e-20!12;CL:0000668!1.14e-20!12;CL:0000414!1.14e-20!12;CL:0000412!1.14e-20!12;CL:0000182!1.14e-20!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.56e-22;12!CL:0002535;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.79e-22,12;CL:0002535,1.78e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.36e-11;11!UBERON:0009497;9.30e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002107!8.28e-23!19;UBERON:0006925!8.28e-23!19;UBERON:0008836!8.28e-23!19;UBERON:0005057!1.46e-20!26;UBERON:0008835!1.51e-19!22;UBERON:0003894!1.51e-19!22;UBERON:0009854!1.20e-18!23;UBERON:0007499!4.57e-17!25;UBERON:0009497!4.57e-17!25;UBERON:0000015!4.57e-17!25;UBERON:0002423!4.57e-17!25;UBERON:0006235!4.57e-17!25;UBERON:0004161!4.57e-17!25;UBERON:0009856!2.29e-16!26;UBERON:0002298!4.53e-14!8;UBERON:0002365!1.52e-13!31;UBERON:0002330!1.52e-13!31;UBERON:0001049!3.38e-12!57;UBERON:0005068!3.38e-12!57;UBERON:0006241!3.38e-12!57;UBERON:0007135!3.38e-12!57;UBERON:0002368!7.26e-12!35;UBERON:0003076!2.16e-11!15;UBERON:0003057!2.16e-11!15;UBERON:0003929!2.54e-11!54;UBERON:0000988!2.98e-10!3;UBERON:0001896!3.75e-10!3;UBERON:0005290!3.75e-10!3;UBERON:0010096!3.75e-10!3;UBERON:0002616!1.29e-09!59;UBERON:0000955!1.39e-09!69;UBERON:0006238!1.39e-09!69;UBERON:0004733!1.97e-09!12;UBERON:0002028!1.97e-09!12;UBERON:0007277!1.97e-09!12;UBERON:0001017!2.07e-09!82;UBERON:0000025!4.40e-09!194;UBERON:0000949!5.66e-09!45;UBERON:0005172!5.68e-09!55;UBERON:0005173!5.68e-09!55;UBERON:0005743!6.91e-09!86;UBERON:0004732!1.02e-08!13;UBERON:0002336!2.50e-08!1;UBERON:0001018!2.50e-08!1;UBERON:0002473!2.50e-08!1;UBERON:0005340!2.50e-08!1;UBERON:0002316!2.50e-08!1;UBERON:0003544!2.50e-08!1;UBERON:0001020!2.50e-08!1;UBERON:0005970!2.50e-08!1;UBERON:0002437!2.50e-08!1;UBERON:0002530!2.82e-08!59;UBERON:0007190!5.82e-08!1;UBERON:0002417!5.97e-08!61;UBERON:0000916!5.97e-08!61;UBERON:0002581!6.24e-08!1;UBERON:0002022!7.16e-08!1;UBERON:0000073!7.25e-08!94;UBERON:0001016!7.25e-08!94;UBERON:0007023!1.41e-07!115;UBERON:0004111!1.56e-07!241;UBERON:0003075!1.67e-07!86;UBERON:0007284!1.67e-07!86;UBERON:0002346!4.31e-07!90;UBERON:0005911!6.95e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.22e-37;19!UBERON:0006925;2.22e-37;19!UBERON:0002423;1.51e-28;25!UBERON:0002365;4.74e-23;31!UBERON:0002330;4.74e-23;31!UBERON:0002368;6.51e-20;33!UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0000949;1.95e-14;43!UBERON:0005172;2.06e-10;52!UBERON:0005173;2.06e-10;52!UBERON:0002417;4.78e-08;58!UBERON:0000916;4.78e-08;58!UBERON:0002530;1.36e-07;57!UBERON:0001007;1.78e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.06e-37,19;UBERON:0006925,2.06e-37,19;UBERON:0008836,2.06e-37,19;UBERON:0008835,2.17e-32,22;UBERON:0003894,2.17e-32,22;UBERON:0009854,5.24e-31,23;UBERON:0007499,1.43e-28,25;UBERON:0009497,1.43e-28,25;UBERON:0000015,1.43e-28,25;UBERON:0002423,1.43e-28,25;UBERON:0006235,1.43e-28,25;UBERON:0004161,1.43e-28,25;UBERON:0009856,1.71e-27,26;UBERON:0002365,3.84e-23,31;UBERON:0002330,3.84e-23,31;UBERON:0002368,1.49e-20,35;UBERON:0000949,4.39e-16,45;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0003929,1.81e-13,54;UBERON:0005172,1.81e-13,54;UBERON:0005173,1.81e-13,54;UBERON:0002530,2.34e-12,59;UBERON:0002417,3.71e-12,60;UBERON:0000916,3.71e-12,60;UBERON:0005911,5.61e-09,82;UBERON:0001041,1.78e-08,87;UBERON:0005177,2.47e-07,101 | |||
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|short_description=p49@LCP1 | |||
}} |
Latest revision as of 13:34, 17 September 2015
Short description: | p49@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_LCP1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 37bp_to_ENST00000435666, uc010ack.2_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | B4DUA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.79e-22 | 12 |
epithelial cell of cervix | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.06e-37 | 19 |
digestive gland | 2.06e-37 | 19 |
liver bud | 2.06e-37 | 19 |
hepatic diverticulum | 2.17e-32 | 22 |
liver primordium | 2.17e-32 | 22 |
digestive tract diverticulum | 5.24e-31 | 23 |
epithelial sac | 1.43e-28 | 25 |
epithelium of foregut-midgut junction | 1.43e-28 | 25 |
anatomical boundary | 1.43e-28 | 25 |
hepatobiliary system | 1.43e-28 | 25 |
foregut-midgut junction | 1.43e-28 | 25 |
septum transversum | 1.43e-28 | 25 |
sac | 1.71e-27 | 26 |
exocrine gland | 3.84e-23 | 31 |
exocrine system | 3.84e-23 | 31 |
endocrine gland | 1.49e-20 | 35 |
endocrine system | 4.39e-16 | 45 |
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
gut epithelium | 1.81e-13 | 54 |
abdomen element | 1.81e-13 | 54 |
abdominal segment element | 1.81e-13 | 54 |
gland | 2.34e-12 | 59 |
abdominal segment of trunk | 3.71e-12 | 60 |
abdomen | 3.71e-12 | 60 |
endo-epithelium | 5.61e-09 | 82 |
foregut | 1.78e-08 | 87 |
trunk region element | 2.47e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.70e-07 | 5 |