FFCP PHASE1:Hg19::chr14:61510434..61510438,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:61510434..61510438,+ | |||
|coexpression_cluster_id=C3438 | |||
|description=CAGE_peak_at_chr14:61510434..61510438,+ | |||
|id=chr14:61510434..61510438,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.10e-10!63;CL:0000576!5.10e-10!63;CL:0000040!5.10e-10!63;CL:0000559!5.10e-10!63;CL:0002009!5.30e-09!65;CL:0000839!1.33e-08!70;CL:0002057!2.32e-07!42;CL:0000557!3.14e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.04e-09;39!CL:0000234;1.04e-09;39!CL:0000860;2.94e-07;33!CL:0002057;2.94e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,7.46e-11,59;CL:0000576,7.46e-11,59;CL:0000040,7.46e-11,59;CL:0000559,7.46e-11,59;CL:0000473,4.01e-10,48;CL:0000234,4.01e-10,48;CL:0002009,5.51e-10,61;CL:0000839,1.32e-08,66;CL:0000557,8.97e-08,67;CL:0000860,8.59e-07,42;CL:0002057,8.59e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.76e-12!57;UBERON:0005068!7.76e-12!57;UBERON:0006241!7.76e-12!57;UBERON:0007135!7.76e-12!57;UBERON:0002616!3.90e-11!59;UBERON:0000955!6.42e-11!69;UBERON:0006238!6.42e-11!69;UBERON:0003080!9.33e-10!42;UBERON:0002780!1.89e-09!41;UBERON:0001890!1.89e-09!41;UBERON:0006240!1.89e-09!41;UBERON:0001017!2.93e-09!82;UBERON:0000073!1.28e-08!94;UBERON:0001016!1.28e-08!94;UBERON:0001869!1.66e-08!32;UBERON:0001893!2.56e-08!34;UBERON:0002020!4.09e-08!34;UBERON:0003528!4.09e-08!34;UBERON:0005743!4.65e-08!86;UBERON:0002791!5.65e-08!33;UBERON:0001474!3.27e-07!86;UBERON:0002371!4.85e-07!80;UBERON:0002619!6.57e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.29e-07;32!UBERON:0002791;3.70e-07;32!UBERON:0003528;4.52e-07;34!UBERON:0002020;4.52e-07;34!UBERON:0002619;6.37e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.61e-10,56;UBERON:0005068,6.61e-10,56;UBERON:0006241,6.61e-10,56;UBERON:0007135,6.61e-10,56;UBERON:0000073,1.28e-09,53;UBERON:0002616,1.28e-09,53;UBERON:0000955,4.39e-09,68;UBERON:0006238,4.39e-09,68;UBERON:0002780,1.04e-08,41;UBERON:0001890,1.04e-08,41;UBERON:0003080,1.04e-08,41;UBERON:0006240,1.04e-08,41;UBERON:0001869,1.81e-08,32;UBERON:0003528,4.45e-08,34;UBERON:0002020,4.45e-08,34;UBERON:0002791,5.34e-08,32;UBERON:0001893,7.05e-08,34;UBERON:0001017,1.34e-07,81;UBERON:0001016,1.40e-07,89;UBERON:0002371,1.68e-07,76;UBERON:0001474,2.47e-07,82;UBERON:0002619,3.30e-07,22 | |||
|phase1_expression=1.2717486548939,1.49870366723688,0.422863212287913,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0.123766352960047,0.994192127183747,2.01697543935533,0.602694528023977,0,0,1.72369481307503,0.612002073732759,0.940364164434263,1.71741592278634,0.821246550437305,0.753255837568817,0.993374274723366,0.656804715599566,0.865818594450472,0.393364276848904,0,0,0,0,0.369754010166788,0.697204805222715,0.426507697462265,0.880801318004542,0.553995408531877,0,0.434021741431704,19.7045617331133,20.4053009591957,20.8636209783691,5.67053131240302,5.66813915533214,4.12392904019288,4.64858073811369,5.75635043230556,5.26500830521676,3.16461631554365,2.81776777182011,1.41889337933151,3.10271112662957,5.80936215225443,6.77132432971709,2.82363509313907,5.73102915121476,3.14612878223118,0.918251677112708,0.641858054152187,0,1.64925650093358,2.39356389145958,0.426224750532694,2.32167390902867,0.56738522469114,0.622822248995575,5.52747063564835,5.21482918420201,1.95469960234605,3.02699751316684,1.84138817993782,1.26584954976354,1.05627643155971,0.637812899895131,1.88692780957538,0.561643155732475,1.65194582125657,0.964353520182481,1.42506371870624,0.99458338599545,2.92262646023414,0,0,0,0,0.800791974072025,0.574752439954483,0,0,0.569212969109448,1.17447437874188,1.91136614062614,0,0.560508562981536,0,0.786839080455332,1.57204305099666,1.43921049299656,0.167186495390678,0.32592226663359,0.946895611469467,0,1.11410456885174,1.47302953737419,0.664601683750863,1.62482318259009,0.640456598628376,1.69077151827842,2.13769275984779,0.552700035571697,0.289803085735052,0.889719378972363,2.1403266247177,3.1360657141493,1.0197840842781,0.766440987203842,0.34362744548263,1.51811815211702,1.27426165729639,1.95325036156926,0.950452044448374,0.301150238155546,0.76791966692651,0,0.473554504088034,0.821127996921047,0.403213486449465,0.802320587350522,1.01377082717959,0,0,0,1.80719576192283,0,1.15877215168659,0,1.45990461090791,3.21418378357831,2.88248216701333,3.77689578480442,2.0956652079634,0,0,23.0428649494825,21.4179576878099,22.3369373671693,0.476981248610684,0,0,0.79504962946682,0,0,0,1.25849830862972,0,0.417989933073621,5.16833518338658,2.49036383880697,2.67776490211736,0.402829317109147,0,0.24406205754817,1.10298924103761,0,2.32179293538607,1.12264686313085,1.12611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,5.03154887090231,4.58938593198102,1.77334191099179,0,0,0,1.55605517699883,1.61652806483626,1.30769522490767,0.605429710579726,0,0.468642863667593,0.312160076830321,0.570471821544449,0.896692083310806,0.939475989150119,2.42809416552197,3.23036855415172,3.67477508258808,3.19369225010597,3.51307655997603,1.18800285728205,0.989067717114227,0,0,3.87173062094352,3.00284447692714,1.38532057742091,1.31693286264251,0.919463387397059,0.300476117813194,0.113432183160021,3.04962380671065,1.06778694409284,1.05965950579781,2.70081986475962,0.412210116953756,2.06112432036503,0.37223371266318,2.19409231913646,1.07180705677318,3.02920529092937,0.736399189138395,2.10139873864455,1.06502877754984,0.806016785821122,0.169560592310488,0.386521706326594,0.818238361772504,0.860413786167011,0.243947412259191,0,0.232387885739037,0.829288440122964,0,1.09493207722749,0,0,0,1.39310378409594,0,0.118306800039844,0,0,0.330881918197182,0.217879444092406,0,0.539325232640658,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0.614942192715568,0.686271241194102,0.109750285408626,0,0.402115889646523,0,0,1.03993478527958,0,0.579652024875384,0.117408694235822,0.433099343283221,0.925971025153221,2.66355813128438,0,0,26.0990026452641,12.4022260523796,11.2959683339433,0,0,0.141775097242386,0.358234090811393,0,0,0,0.792435906119034,0.621984346622316,0.720599767084807,0.12624243342638,0.507983154337352,0.381988425558278,0,1.71072446022705,0.205654985406647,0.901029173531752,2.28661146104463,0.448524337381443,0.43596006883328,0.51336800074665,2.06834745212444,0,0,0.797814349754612,2.08014873822732,0.771622122786426,1.41849132023278,0,0.428933980974443,0.542621605391443,0,0.65147236858747,0.355391948742546,0,1.80863626235752,0,1.69954085009497,3.64871341923571,8.03611346291402,12.6500363689819,0.479249710983165,1.14861935834114,0,1.44781306667579,3.08214483825575,1.79060963239896,0.336255431980582,0.197030760201927,0.431255149719035,1.15508732651774,0.508189248444927,0,0,1.00509759200609,0,0,0,0,0.36807447515742,0,0.542530047399471,5.8231841228626,4.99601168632053,2.99634588564476,2.6942525448324,0,0,0,0,0,2.78027566297865,0.783204629850962,0.686286847621712,2.06768026122887,0.431428401637234,0.213455115606889,0,0,0,0.744323423456331,2.76231551918512,1.40330047216537,0.768834895534206,0.511707249066704,1.12597744800525,0,0.925258162815933,0.710246901252508,0.821271560138091,0.519254429183621,0.464841513839837,0.362578348774867,0.40101294060657,0.552485933615378,1.03333003348146,1.27463817604702,2.36023946926963,0.451199612907412,0.231046011313244,0,0,0.316654886678627,1.13733384070897,0.340187410553031,0.647747748306418,0,0,0,0.254876273045038,0,0.671624264166535,1.53481913652154,0.784306353074702,0.256450125116389,0,0,0.618246069886334,1.00726411300178,0.742585499285292,0,0,1.6068392984416,1.64340221096607,2.15668063960502,1.38153307253517,2.89456802217514,3.33002759091648,1.30515024522806,2.13066568540252,0.445160178233687,0.330569830721956,0.192190067365106,3.82838137483752,0.30347334256665,0,1.5740617341532,0,0,0,0,0,0.143124886741991,3.72158369359667,3.48017367190598,0.953150969619124,0.255897791311334,0,0.636406495851874,0,3.77732160924961,3.0199073270966,1.41374882814824,0,0,0.421258456238981,0,0.487426979262569,0,1.36499911407986,1.41405431953713,0,0,0,0,1.15755106853338,1.9676842561399,0.202910376962704,0.6196469961995,0.281695602532241,0.430234056612155,0.196498082026242,0,1.77380532035299,1.47775344708365,0.658589785919804,0.379473173765715,0.699869440489966,0,0,0,0.564862804660675,0.43050537267123,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,1.19115887728894,0.411362273086194,0,0.540031437238115,0,0.854592569019785,0,0.245040215981032,1.30062222588003,0.577076851905779,0.355709216742071,0.318852545457645,0.199579371432817,0,0.211673582723883,0.324621940274555,1.40398589056729,0.228234679033192,0.47003968731907,0,0.846458889008016,0.321176150207399,0.403599414382095,1.27753871307098,3.43505344755765,0.307240764308458,0.447352215784832,0.333698283423817,0.586164286206121,1.39203086947621,0,1.89318974933188,0,2.81974010175699,0.37428108081644,1.46508179271894,1.21360521749513,0.891547074219827,1.98895302764489,0.47748896947538,0.296964680832639,0,4.97073823883149,1.40669416410513,5.12020043105367,2.14245036494787,2.32237948940793,3.78571177677032,0.276283915531148,2.01546198283421,0.818149460017238,0.615424027305347,0.622079175323615,1.70749867179921,1.61119057208048,3.5810065915881,0.493217028184668,0,0,2.90799823828566,1.20598527610407,0,0,1.31189999994294,2.17499872630438,1.0241410345695,2.2882828526349,2.6002644994473,1.72371686620732,1.74962768029953,1.73624994933292,3.54296554325536,1.5677537021303,6.10326945268333,2.21158519862449,2.36438095162838,0,0.544692317594951,0.697118721393016,1.30815439456455,1.13942055847001,1.84451123510448,1.43612231055635,0.760531603454056,0.638002319463839,0.183195186803725,0.533034776018635,2.04386596391473,0,2.16075186470203,0.676786981851542,0.392125068635479,0.839107934879214,1.3282761290693,3.49660473756833,1.47698645169619,0.652931232636591,0.424059214301822,0.216388639742091,0,0.619202951523374,2.4441205797345,0,0.247127877893006,0.208843899010911,0.943615861729479,3.21031058919516,0.937057782901357,0.91227394607833,1.36965233252463,3.88448607254548,1.18375320854817,6.04953580243319,1.53036380815245,2.84339608328196,0.450970258243478,0.518440956986236,0.664653872707185,1.98595173525299,0.627865836814451,3.58417289318877,0.569219092059585,0.416024019039416,1.73559738335131,1.46988596121566,1.30588809870604,3.14508002835654,3.95567874684718,0.774050650312681,0.511625219603299,0.246346371159628,0.678923115418936,2.02989091390451,1.35588444468319,3.15196426687527,0.993573058514948,1.89932387867636,1.75996244461323,3.12619398980981,0.85381197895741,1.19885765749278,0.432271251462318,1.14536596165916,2.57392496792947,0.14405479798815,1.86378803348149,0.471388069233591,0.543616824294456,1.255234155748,2.14196257036276,1.73370353940911,1.80126086612937,1.23214841002794,0,0.859530882839914,1.05154941711726,0.558564802544508,0.916641696046735,0,1.39775300349294,0,0.223171457441873,0.268733889946905,0.720599767084807,0,1.02418136999391,0.824158583811665,0.606631894687664,0.295282444544246,0,6.36183751847443,2.04305109167363,0.964518890790115,0.825236619583403,1.24632101408756,0.2249738915515,0,1.64023802976667,1.34173875039706,0.945668487590378,0.524545881349981,0.739202355635845,1.07572403599707,0.383830394638891,0.714695326373367,0.662091970365432,1.5256112259285,1.08599920350743,0,0.653174720218818,0,0.985110248992068,1.36310417428337,0.906496732161005,0.293104467356165,0,1.0342636508924,1.45455861916959,2.9084762440336,2.11444506695002,0.213574825135389,2.82967749179399,5.79934677486074,1.48849806543585,0.988058159489721,0.243585196761792,0,0,0.2506898940227,0.919036730290385,0.327872630709804,0.628216385000937,4.43034089983493,2.92863035764712,1.001527445652,2.29363678276028,0.998361463831671,1.55241007353459,1.24513771442608,0.499921631848426,1.66814029295813,1.14186133417987,0.941063278792687,0,0.144921028610825,0.895528817321244,3.73941295755559,6.10286447652875,1.13641803165053,3.0188148210309,1.77962244319307,0.686520205190771,2.41969478021182,1.5543720058278,1.62640664988597,1.11507737014592,6.74704668245407,1.39736661188633,2.90294345488599,2.12673371646396,1.5652351854352,1.80309130796662,1.90402606084398,2.84809513243263,1.63663793282303,1.8259794697223,3.24823631914946,2.3885753321917,2.40016658797892,0.343395705182793,0.673498977531838,2.52369796457302,0.385239660814607,1.71553273099941,0,1.36023555307363,0.231522474323834,0.97894681802587,1.25362188757041,0.926404341482917,1.97355644620836,1.06013487567529,2.31496845925098,1.8583668471838,0.512483037175893,1.72715170865599,0.607719912354764,1.65910123382077,0.194860308839388,0.531459361253452,0.327130788511688,1.96565909307848,1.72041036127604,0,0,0.106691729694141,1.72214979660816,0.567515953566836,1.65695355226657,0.419638523158333,1.24415452006595,1.15104934173287,0.646948868380091,2.04445724412665,0.982886743728125,3.90384818894258,1.48802444071178,2.85052257795705,0.558644917973244,0.636008701306837,0.394308725006267,1.60114149657094,1.05802783107205,2.1437183414724,1.73418907760441,2.8339315265117,1.75597244962866,1.64093091392604,2.7727886584389,0.829887029570615,2.09918339321406,2.85538840518309,1.27592034051333,1.65157612686837,2.20114318226015,0.346576998451015,0,0.690359926060101,1.39241355481392,0.676892955143315,2.62216589314576,0.781514011233092,1.57144016688853,0.49131575253029,2.95712172434091,2.43135304626221,4.68646859168308,2.27355476151302,1.07806877329642,2.18789923607288,0,3.47347824872506,0.879356221798103,0.638812138197976,0.535701835878287,1.68141861109412,3.64179362541979,2.50428410486427,0.266107110487916,0.691403925334676,3.60124819818579,1.4953341254903,1.64431933907123,1.06374456795571,2.44709084162552,0.313972371402056,4.24212092773205,0,3.65263488203798,0.431855182437243,0.9555033757741,1.21510125100316,1.58013611732727,1.62737995515375,1.91244099532837,0,1.86494547746733,0.3414369541879,1.38251932362818,0.860454717640555,1.65664801022791,2.13033511897894,1.69354820076372,1.3746412112643,0,0,0.111855431797792,0.883352102537187,0.365753774946808,1.94228651156368,0.615976841137482,4.6392577253528,3.39997695141398,2.33939463462106,0.397901550322736,0.475680363110274,0.5647304101948,0.439762066981716,1.81155412280008,0.385870790539723,2.18559560503957,0,2.94177986104687,0.235676547101626,2.1593931382644,0.891139200981258,2.5359343655004,1.0195626881269,0.281951753939561,0.45120521581504,0.399764623699716,1.60698544745092,1.76447435857846,2.32699963398588,1.46067277649303,0.917458566809082,1.00337708206016,1.10440093535229,0.883889372481891,2.61810414204226,1.5870805215462,0.743990036333503,1.38652688589425,0.432626562123789,0.883164973845552,0.98339014767326,2.15387451719443,0.61193297845189,1.06886962106224,0.551369397209069,0,0.606229585745915,3.48353369203032,4.1458471972939,1.55149493792843,1.91910583710883,2.61870874610114,0.452122368852043,0.931120714437869,2.01837352645104,0.25458863311266,1.61693751166575,1.30630048738177,2.39563310759697,0.740872583160463,1.07583308089015,4.32458463509817,1.79087190944144,2.98836568457603,0,0.359300808426348,0,1.4668973301944,1.62758471326295,0.665756774185513,0.603821380773079,0.641136984606466 | |||
|short_description=p@chr14:61510434..61510438,+ | |||
}} |
Latest revision as of 21:36, 24 July 2015
Short description: | p@chr14:61510434..61510438, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:61510434..61510438, + |
Coexpression cluster: | C3438_Macrophage_CD14_Monocytederived_Dendritic_Fibroblast_mesenchymal_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 7.46e-11 | 59 |
monocyte | 7.46e-11 | 59 |
monoblast | 7.46e-11 | 59 |
promonocyte | 7.46e-11 | 59 |
defensive cell | 4.01e-10 | 48 |
phagocyte | 4.01e-10 | 48 |
macrophage dendritic cell progenitor | 5.51e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.32e-08 | 66 |
granulocyte monocyte progenitor cell | 8.97e-08 | 67 |
classical monocyte | 8.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.59e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.61e-10 | 56 |
neural rod | 6.61e-10 | 56 |
future spinal cord | 6.61e-10 | 56 |
neural keel | 6.61e-10 | 56 |
regional part of nervous system | 1.28e-09 | 53 |
regional part of brain | 1.28e-09 | 53 |
brain | 4.39e-09 | 68 |
future brain | 4.39e-09 | 68 |
regional part of forebrain | 1.04e-08 | 41 |
forebrain | 1.04e-08 | 41 |
anterior neural tube | 1.04e-08 | 41 |
future forebrain | 1.04e-08 | 41 |
cerebral hemisphere | 1.81e-08 | 32 |
brain grey matter | 4.45e-08 | 34 |
gray matter | 4.45e-08 | 34 |
regional part of telencephalon | 5.34e-08 | 32 |
telencephalon | 7.05e-08 | 34 |
central nervous system | 1.34e-07 | 81 |
nervous system | 1.40e-07 | 89 |
bone marrow | 1.68e-07 | 76 |
bone element | 2.47e-07 | 82 |
regional part of cerebral cortex | 3.30e-07 | 22 |