FFCP PHASE1:Hg19::chr15:40213106..40213121,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32370 | |||
|TSSclassifier=strong | |||
|UniProt=Q14439 | |||
|association_with_transcript=-13bp_to_ENST00000561100,NM_007223,uc001zkj.1,uc001zkk.1_5end | |||
|cluster_id=chr15:40213106..40213121,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_5_at_GPR176_5end | |||
|id=chr15:40213106..40213121,- | |||
|ontology_enrichment_celltype=CL:0000055!2.63e-22!180;CL:0000057!1.10e-13!75;CL:0002321!1.29e-07!248;CL:0002620!1.39e-07!23;CL:0000220!4.71e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.75e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.53e-11,76;CL:0002620,5.82e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.41e-16!365;UBERON:0000119!2.74e-15!312;UBERON:0000483!3.73e-15!309;UBERON:0000064!9.93e-12!219;UBERON:0000924!3.41e-11!173;UBERON:0006601!3.41e-11!173;UBERON:0004121!7.62e-11!169;UBERON:0000481!8.70e-11!347;UBERON:0005743!7.38e-10!86;UBERON:0000073!8.65e-10!94;UBERON:0001016!8.65e-10!94;UBERON:0000468!1.24e-09!659;UBERON:0000033!1.55e-09!123;UBERON:0000477!1.92e-09!286;UBERON:0001017!4.85e-09!82;UBERON:0000153!2.00e-08!129;UBERON:0007811!2.00e-08!129;UBERON:0002346!3.22e-08!90;UBERON:0003075!6.53e-08!86;UBERON:0007284!6.53e-08!86;UBERON:0001869!8.51e-08!32;UBERON:0002020!2.11e-07!34;UBERON:0003528!2.11e-07!34;UBERON:0000914!2.18e-07!83;UBERON:0002329!2.18e-07!83;UBERON:0003077!2.18e-07!83;UBERON:0003059!2.18e-07!83;UBERON:0007282!2.18e-07!83;UBERON:0009618!2.18e-07!83;UBERON:0007285!2.18e-07!83;UBERON:0000955!2.23e-07!69;UBERON:0006238!2.23e-07!69;UBERON:0001049!2.91e-07!57;UBERON:0005068!2.91e-07!57;UBERON:0006241!2.91e-07!57;UBERON:0007135!2.91e-07!57;UBERON:0004111!3.25e-07!241;UBERON:0005256!3.49e-07!143;UBERON:0000025!3.49e-07!194;UBERON:0002097!4.09e-07!40;UBERON:0002616!4.84e-07!59;UBERON:0001893!5.00e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.51e-08;32!UBERON:0003528;8.02e-08;34!UBERON:0002020;8.02e-08;34!UBERON:0002791;1.62e-07;32!UBERON:0001893;1.73e-07;34!UBERON:0000956;2.34e-07;25!UBERON:0000203;2.34e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.16e-10,171;UBERON:0000924,3.16e-10,171;UBERON:0006601,3.16e-10,171;UBERON:0001016,6.51e-10,89;UBERON:0001017,6.62e-10,81;UBERON:0010314,7.77e-10,132;UBERON:0001869,3.04e-09,32;UBERON:0000483,3.29e-09,306;UBERON:0000119,4.38e-09,309;UBERON:0003528,4.47e-09,34;UBERON:0002020,4.47e-09,34;UBERON:0000073,7.64e-09,53;UBERON:0002616,7.64e-09,53;UBERON:0002346,9.41e-09,86;UBERON:0003075,1.09e-08,82;UBERON:0007284,1.09e-08,82;UBERON:0001049,1.51e-08,56;UBERON:0005068,1.51e-08,56;UBERON:0006241,1.51e-08,56;UBERON:0007135,1.51e-08,56;UBERON:0001893,2.88e-08,34;UBERON:0000955,3.37e-08,68;UBERON:0006238,3.37e-08,68;UBERON:0002791,4.55e-08,32;UBERON:0010371,5.07e-08,104;UBERON:0000956,2.95e-07,25;UBERON:0000203,2.95e-07,25;UBERON:0002097,5.97e-07,41;UBERON:0003056,6.21e-07,61 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.845726424575827,0,0.893922188854576,0,0,0,1.04474251279935,0.491467873003018,2.79120467188971,1.09220686065086,1.31883489114227,1.48519623552056,1.32558950291166,0.672325146451775,0,0,0.975865597581014,0.738726348460727,1.02000345622126,0,2.28988789704845,2.87436292653057,2.38531015230125,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,2.68280343881454,1.79007586580942,0,1.00267582127178,0.579386075843295,0.795285947051099,0.973269740605272,0.756278537312543,0.886917589850256,1.05401742831751,0.458426764241994,1.82147644146271,1.48313777113772,0,0.348259474598534,0,0,0,0,1.59009925893364,0,0.347140501607594,0.56530794192401,0.419499436209906,1.92582629358047,0.835979866147242,0,0,0,2.01414658554573,0.760272105718513,0.732186172644509,0,0.81014194788176,0.982297011124877,0.44905874525234,0.337834441449967,1.53316637465883,1.89853131913626,0.366403487860815,0,0,0,1.98788780678127,2.02608818663328,1.45650098894541,2.29469296599051,0.709336764396714,0.560677600142307,0,3.20667812942308,0.311211035399766,1.21239604862719,1.47115712802113,0.908144565869588,0,1.17160715916898,1.24864030732128,2.2818872861778,1.19558944441441,1.52664848236894,1.29498355494505,0.702254033511242,1.22492502752936,0.982674538494144,0.723280468230358,3.56400857184616,1.7308685049499,0.910161361938026,1.43723628363248,0.673344455816265,0.875829639103749,1.6623846929051,0.438977620880838,2.75839016219118,0.751190294532984,1.13432183160021,1.97328599257748,4.91181994282705,2.11931901159562,1.50045548042201,1.64884046781502,1.54584324027377,1.30281799432113,0.337552664482532,1.07180705677318,1.51460264546469,2.94559675655358,0.969876340912871,2.13005755509969,0.806016785821122,2.03472710772585,0.966304265816484,0.818238361772504,0.860413786167011,10.7336861394044,9.14455401418248,8.24976994373581,5.39037486079926,8.57890892977137,14.5990943630332,4.69348596989448,5.78916844373597,1.38134921352481,0.464367928031979,0,0.473227200159376,1.68584690078102,0.723033089650446,0.882351781859152,0.435758888184812,1.18635309555548,1.07865046528132,0.784885860501384,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0.441463099414651,0.491953754172454,0.514703430895577,0.439001141634502,2.24803506515239,1.00528972411631,1.29623823221941,0.651616610620649,0,2.88662684050547,0.695582429850461,0.469634776943287,0.866198686566443,1.85194205030644,0.951270761172991,1.58040879591855,0,0,0,0.148631162288728,0,0.503946384596579,0.283550194484773,1.25381931783988,0.290633938513962,0,0,0.880484340132261,0,0.144119953416961,0.25248486685276,0.190493682876507,1.14596527667483,1.17217447210047,0,0.205654985406647,0.300343057843917,0,1.00917975910825,0.43596006883328,0.66004457238855,1.16344544182,0,1.690605505112,1.32969058292435,1.04007436911366,0.514414748524284,2.83698264046557,1.3321108950805,0.714889968290738,1.08524321078289,0.823240336780769,0.977208552881205,0.710783897485092,0,0.904318131178758,0.871533458600294,0.99972991182057,0,0,0,1.91699884393266,0,1.42636905040718,0.868687840005475,0.821905290201534,0.895304816199478,0,0,0.215627574859517,0.128343036279748,0.508189248444927,1.30139853857622,0,1.17261385734044,1.27587750330633,0,0,0,1.47229790062968,0.500170521059677,0.813795071099207,1.24782516918484,0.892144943985809,1.57702415033935,2.10854546986884,0,2.27407504055985,2.0694614258501,1.99267679560631,1.29058417979192,2.43274120510632,2.34961388955289,1.02943027143257,0,0,0.213455115606889,0.303127571446259,0,0,1.24053903909388,1.07423381301644,1.96462066103151,1.02511319404561,2.04682899626681,1.44768529029247,1.48418066444991,0.771048469013278,0.710246901252508,1.14978018419333,0.519254429183621,1.04589340613963,0.604297247958111,0.802025881213139,0.276242966807689,0.574072240823034,0.728364672026868,1.70461739447251,0,1.5403067420883,2.35304930753057,1.46139224653261,1.05551628892876,2.27466768141793,0.850468526382578,0.863663664408557,1.54227252690289,2.16757150035082,3.01013864312912,1.27438136522519,0.831076008928724,1.11937377361089,0,0.522870902049801,2.56450125116389,1.31205858279882,2.27764876265012,0.412164046590889,2.56394501491362,2.22775649785588,1.14853107599234,0,3.21367859688319,1.64340221096607,1.07834031980251,1.22802939780904,1.24052915236078,1.6113036730241,2.46528379654188,0.93749290157711,0.623224249527161,0.495854746082934,0.576570202095319,0.510450849978337,0.30347334256665,0.929691098594572,0.62962469366128,0,1.23213432070436,0.532306030317022,2.60979897622522,1.29726953372744,1.28812398067792,1.48863347743867,1.2655176988749,0.190630193923825,1.27948895655667,1.71175595213568,1.27281299170375,1.56989728039846,1.2591072030832,1.37268514868027,0.942499218765491,0.808729926293264,0,1.26377536871694,1.95053495635836,0.243713489631284,0,1.09199929126389,1.27264888758341,0,0.551365343546124,0,1.75380354101505,1.15755106853338,0.655894752046633,1.01455188481352,0.30982349809975,0.563391205064483,0.860468113224309,2.06322986127554,1.426684205925,0.709522128141196,1.47775344708365,1.31717957183961,1.89736586882858,1.39973888097993,0.577332676353072,0.670302275535787,1.08890984861323,0.564862804660675,0.43050537267123,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,5.33796088012846,0.924843963529383,0.159426272728822,0.199579371432817,0,0.635020748171649,0,0,0.228234679033192,0,0,0,0,0,0,1.03051603426729,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.36408156524854,0,0.284136146806413,0,0.296964680832639,0,0,0.844016498463076,8.01422676164922,0,0,1.19548792950642,0.276283915531148,1.0077309914171,2.96579179256249,0,1.24415835064723,1.16828856491525,0,0,0.197286811273867,0,0,1.93866549219044,1.85536196323703,5.98841394003583,0,0.174919999992391,0,0.1137934482855,0.762760950878299,0.472775363535873,5.8606373451049,1.16641845353302,1.73624994933292,0.885741385813839,5.06505042226713,3.05163472634166,6.08185929621735,4.72876190325676,1.53569778007781,0.21787692703798,0.139423744278603,0.230850775511391,1.48124672601102,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0.19606253431774,0,0,0,0.421996129056054,0.816164040795739,0.989471500037586,0.649165919226273,0,0.265372693510018,0.611030144933625,1.18608451472249,0.741383633679017,0.730953646538188,0.539209063845416,0,0.937057782901357,0,0,0,0,0,2.75465485467441,0.442306057399416,2.25485129121739,0.414752765588989,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0,0.0979923974143777,4.61413794876134,0.17472666824203,0.171986032471617,0.387025325156341,0.65780385377567,0.739039113478883,0,0,0.677942222341597,0.959293472527256,0.596143835108969,3.35547218566157,0.195551382734803,1.76349404553374,0.640358984218058,0.599428828746391,0,0.458146384663663,0.857974989309823,0.720273989940749,0.49701014226173,0,0.271808412147228,0.732219924186332,0.407992870545287,0,0,1.09524303113594,0,0.859530882839914,1.05154941711726,0,0,0.717873024576814,0,0,0,0.403100834920358,1.44119953416961,0,0.0787831823072236,0,0,0.78741985211799,0,0.795229689809303,2.04305109167363,12.0564861348764,27.7829661926412,19.9411362254009,0,0,2.91597871958518,0.670869375198532,0,0.734364233889974,1.79520572082991,0.179287339332845,1.34340638123612,0,0,0,0.542999601753713,0,0.653174720218818,1.19730191562487,0.328370082997356,1.5334921960688,2.26624183040251,0.146552233678082,0,1.55139547633861,2.38018683136842,0.171086837884329,0,0,0.157204305099666,0,0.496166021811951,0,0.121792598380896,0,1.08803560673895,0.5013797880454,0.919036730290385,0.655745261419609,0,0,1.58634144372552,2.3786276834235,0.573409195690071,0.776503360757966,2.42175971471395,0.830091809617385,0.624902039810533,0.151649117541648,0,1.41159491818903,0,3.18826262943815,1.04478362020812,0.467426619694449,0.554805861502613,1.13641803165053,1.0062716070103,0,0,0.756154618816195,0.932623203496683,0.73927574994817,0.796483835818512,0.449803112163605,0.465788870628778,2.48823724704513,0.265841714557995,1.04349012362347,1.95334891696384,1.52322084867518,0.406870733204662,2.18218391043071,1.07410557042488,1.85613503951397,1.99047944349308,2.40016658797892,1.37358282073117,1.34699795506368,0,0.385239660814607,1.07220795687463,2.3489486276869,0.226705925512272,0.694567422971502,0.734210113519403,1.25362188757041,0,0.438568099157414,1.59020231351293,0.578742114812744,1.8583668471838,0,1.38172136692479,2.43087964941906,1.52084279766904,0,0,0,2.94848863961771,2.94927490504463,1.26787274015176,0,0.640150378164845,0,1.13503190713367,4.41854280604418,0,0,0.895260599125562,1.50954735955355,0,0.655257829152084,0.33946505990805,0.637724760305049,1.73510069962603,0,1.27201740261367,1.34064966502131,1.60114149657094,3.52675943690684,2.4499638188256,3.78952428069111,0,1.11743701340006,2.05116364240755,2.01657356977374,2.62797559364028,2.26065903884592,0,2.15924980702256,0.235939446695481,1.10057159113007,0.462102664601353,2.288292572803,0.690359926060101,0.198916222116275,0.300841313397029,0.80682027481408,0,0,1.96526301012116,1.6264169483875,3.98471749248528,0.781078098613847,0.826747186004736,3.10737469950143,1.09394961803644,0,0,1.23109871051734,0.383287282918786,0,0,0,1.82129753081038,0.354809480650555,0,0.342976018874837,3.67036558074891,2.56513816895111,0.354581522651905,0.667388411352415,0.627944742804112,4.87058328739606,0,0.913158720509496,0.647782773655864,1.43325506366115,0.357382720883282,0,0,0,0,0.62164849248911,0.3414369541879,1.38251932362818,0,1.89331201168905,2.2155485237381,0,0.68732060563215,1.24082554265728,0,0,0,0.121917924982269,0,0.205325613712494,0,0.485710993059139,1.40363678077263,0.596852325484105,0.594600453887843,0,0.549702583727146,0.452888530700021,0.154348316215889,0,0.470317296361523,0.245148321753905,0,0.392616934229891,0.594092800654172,1.6906229103336,2.37897960562944,0.0939839179798536,0.45120521581504,0.0999411559249289,0.357107877211315,1.76447435857846,0,0,0,0,0,3.33158301935482,4.79985759374415,0.5290268405154,1.48798007266701,1.84870251452567,0.865253124247578,0.504665699340316,0,0.380095503034311,0.815910637935854,0,0.459474497674225,0.250707539292375,0.303114792872958,0,0,0.413731983447581,0.213233981900981,0.476128862927481,0.129177819672012,0.434523000071005,3.25182401483779,0.190941474834495,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.215166616178029,0.332660356546013,0.651226148887796,2.34800160930974,1.9307228228694,0.359300808426348,0,0.366724332548599,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p5@GPR176 | |||
}} |
Latest revision as of 12:21, 17 September 2015
Short description: | p5@GPR176 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPR176_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -13bp_to_ENST00000561100, NM_007223, uc001zkj.1, uc001zkk.1_5end |
EntrezGene: | GPR176 |
HGNC: | 32370 |
UniProt: | Q14439 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.53e-11 | 76 |
skin fibroblast | 5.82e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.16e-10 | 171 |
ectoderm | 3.16e-10 | 171 |
presumptive ectoderm | 3.16e-10 | 171 |
nervous system | 6.51e-10 | 89 |
central nervous system | 6.62e-10 | 81 |
structure with developmental contribution from neural crest | 7.77e-10 | 132 |
cerebral hemisphere | 3.04e-09 | 32 |
epithelium | 3.29e-09 | 306 |
cell layer | 4.38e-09 | 309 |
brain grey matter | 4.47e-09 | 34 |
gray matter | 4.47e-09 | 34 |
regional part of nervous system | 7.64e-09 | 53 |
regional part of brain | 7.64e-09 | 53 |
neurectoderm | 9.41e-09 | 86 |
neural plate | 1.09e-08 | 82 |
presumptive neural plate | 1.09e-08 | 82 |
neural tube | 1.51e-08 | 56 |
neural rod | 1.51e-08 | 56 |
future spinal cord | 1.51e-08 | 56 |
neural keel | 1.51e-08 | 56 |
telencephalon | 2.88e-08 | 34 |
brain | 3.37e-08 | 68 |
future brain | 3.37e-08 | 68 |
regional part of telencephalon | 4.55e-08 | 32 |
ecto-epithelium | 5.07e-08 | 104 |
cerebral cortex | 2.95e-07 | 25 |
pallium | 2.95e-07 | 25 |
skin of body | 5.97e-07 | 41 |
pre-chordal neural plate | 6.21e-07 | 61 |