FFCP PHASE1:Hg19::chr15:72502039..72502043,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5315 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9021 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=156bp_to_uc002atu.1_5end | |||
|cluster_id=chr15:72502039..72502043,- | |||
|description=CAGE_peak_11_at_PKM2_5end | |||
|id=chr15:72502039..72502043,- | |||
|ontology_enrichment_celltype=CL:0000548!5.62e-18!679;CL:0000004!5.62e-18!679;CL:0000255!5.62e-18!679;CL:0000012!4.09e-17!682;CL:0000055!7.25e-14!180;CL:0000144!7.78e-14!625;CL:0002371!2.78e-13!591;CL:0000003!3.38e-13!722;CL:0000220!1.29e-10!246;CL:0002321!1.45e-10!248;CL:0000183!7.20e-10!59;CL:0000680!3.34e-09!57;CL:0000056!3.34e-09!57;CL:0000355!3.34e-09!57;CL:0000187!2.23e-08!54;CL:0000393!4.09e-08!60;CL:0000211!4.09e-08!60;CL:0000222!4.21e-08!119;CL:0000192!1.85e-07!42;CL:0000514!1.85e-07!42;CL:0000057!4.84e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.06e-08;55!CL:0002494;3.12e-07;16!CL:0000048;3.36e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.84e-08,250;CL:0000222,8.02e-08,121;CL:0000680,1.26e-07,58;CL:0000056,1.26e-07,58;CL:0000355,1.26e-07,58;CL:0002494,1.47e-07,16;CL:0000187,6.21e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.73e-10!83;UBERON:0002329!6.73e-10!83;UBERON:0003077!6.73e-10!83;UBERON:0003059!6.73e-10!83;UBERON:0007282!6.73e-10!83;UBERON:0009618!6.73e-10!83;UBERON:0007285!6.73e-10!83;UBERON:0000486!1.13e-09!82;UBERON:0004290!1.58e-09!70;UBERON:0001134!2.75e-07!61;UBERON:0002036!2.75e-07!61;UBERON:0003082!2.75e-07!61;UBERON:0005256!4.71e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.38e-11,78;UBERON:0002329,2.66e-08,71;UBERON:0003059,2.66e-08,71;UBERON:0007282,2.66e-08,71;UBERON:0004290,2.66e-08,71;UBERON:0009618,2.66e-08,71;UBERON:0003077,4.50e-08,72;UBERON:0007285,4.50e-08,72;UBERON:0007524,7.47e-08,73;UBERON:0005256,1.51e-07,122;UBERON:0000486,2.23e-07,83 | |||
|phase1_expression=0,2.14100523890983,0.140954404095971,2.00146596706261,2.68176656656373,4.36169262050184,0,0,0.261185628199839,0.737201809504527,2.09340350391728,0.218441372130172,0,1.23766352960047,4.63956326019082,2.01697543935533,3.01347264011988,0.730310090387373,0,0.492484232307152,2.24400760368678,1.25381888591235,0.572471974262113,0.547497700291537,0.376627918784408,0.305653622991805,0.246301768349837,0.236132343941038,0,0,0.154816123316076,3.67768489791571,3.91567694411725,2.9580320813343,0.232401601740905,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0.726991193897824,0.755751887377619,0,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0.709446689665756,1.03423704220986,0,0,0.752969358170419,0.272906150057846,0.449446968890169,0.612167784741805,0.320929027076094,0,0.329851300186716,0.598390972864896,0,1.16083695451434,0,0.622822248995575,0.75374599577023,0.521482918420201,0.65156653411535,0,1.47311054395026,0.949387162322653,0.633765858935825,0.637812899895131,0,0.112328631146495,0,0,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.552700035571697,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,2.43806866313962,1.34140171940727,0.639312809217652,0,2.00535164254356,1.01392563272577,0,0.486634870302636,0.378139268656271,1.33037638477538,0.790513071238134,0.0654895377488563,0,3.33705998505986,0.649094787309367,0.174129737299267,1.19662164466979,0.238490624305342,0,0,0,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0.417989933073621,0,0,0,0,0,0.24406205754817,0,3.24056779152704,0.0892997282840798,0.673588117878509,0.563057402416611,1.53316637465883,0,0.366403487860815,0,0,1.3082821564276,0.993943903390637,0.379891534993739,0.662045904066094,2.0078563452417,0.709336764396714,1.12135520028461,4.2699598291882,1.72667283892012,0,0.808264032418128,0.817309515567294,0.151357427644931,0.576175924479999,0,0.624320153660641,1.1409436430889,0.747243402759005,0.822041490506354,1.45685649931318,0.421352420106746,0.204154171254893,1.22834317311768,0.413303124703062,0,1.48360157567134,0.910161361938026,4.31170885089743,0.505008341862199,0.625592599359821,0,0.438977620880838,2.14541457059314,0.45071417671979,1.13432183160021,1.25572744982203,0.640672166455702,0.211931901159562,2.40072876867522,0.92747276314595,0.772921620136887,0.37223371266318,0.337552664482532,0.487185025805993,1.51460264546469,0.184099797284599,0.323292113637624,0.355009592516614,0.906768884048762,1.18692414617341,0.773043412653187,0.272746120590835,0,0.243947412259191,0.265059536642971,0.580969714347592,0.725627385107593,0.252320850875628,0.36497735907583,1.56449532329816,6.43240938192885,1.38134921352481,0.464367928031979,2.16563844500876,1.53798840051797,1.68584690078102,0.723033089650446,1.43382164552112,2.39667388501647,1.18635309555548,1.61797569792197,0.392442930250692,0.769494313892781,1.4763109092493,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0.590789906681404,1.7658523976586,0.122988438543114,0.343135620597051,0.219500570817251,0,1.20634766893957,0.277765335475589,0.325808305310325,1.03993478527958,7.21656710126366,0,0.352226082707465,0,0.925971025153221,0.190254152234598,1.58040879591855,4.29243081047436,0.984868024349589,0.468008530278475,0.445893486866185,0,1.00789276919316,0.992425680696705,0.447792613514241,0.871901815541886,2.30029607499127,0,0,0,0,0,0,0,1.17217447210047,0,0.925447434329912,1.20137223137567,0.285826432630578,0.448524337381443,0.87192013766656,0.22001485746285,0.387815147273333,0,0.845302752556,1.32969058292435,1.04007436911366,0.771622122786426,2.83698264046557,1.5985330740966,0.428933980974443,0,1.64648067356154,0.325736184293735,0,1.58390374586686,0.904318131178758,0,0.499864955910285,0,0,0,0.718874566474748,0,0,1.01346914667305,1.84928690295345,0.716243852959582,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0.623912584592421,2.67643483195743,0.630809660135739,0.585707074963566,0,2.27407504055985,0,0,1.10621501125022,0.434418072340414,0.587403472388222,1.02943027143257,0,0.431428401637234,0.106727557803444,0,1.66435439510497,2.11673205330776,0.496215615637554,0.61384789315225,0.841980283299221,0.384417447767103,0,0.321707842287215,0,0.462629081407967,0.887808626565635,0.0821271560138091,0,2.44041794765914,0,3.20810352485256,0,0.918515585316854,1.82091168006717,2.22911505431021,0.451199612907412,0.539107359730903,0,0,0.211103257785751,3.4120015221269,2.04112446331819,1.94324324491925,0,1.08378575017541,2.00675909541941,0.764628819135115,2.49322802678617,0.671624264166535,0,0,0.769350375349168,0,0,0,0.183138929636687,0,0,1.95018073810956,0,0.290012154876366,1.07834031980251,1.22802939780904,0.413509717453592,0.322260734604821,1.160133551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| |||
|short_description=p11@PKM2 | |||
}} |
Latest revision as of 22:30, 18 September 2015
Short description: | p11@PKM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PKM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 156bp_to_uc002atu.1_5end |
EntrezGene: | PKM2 |
HGNC: | 9021 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.84e-08 | 250 |
mesodermal cell | 8.02e-08 | 121 |
muscle precursor cell | 1.26e-07 | 58 |
myoblast | 1.26e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-07 | 58 |
cardiocyte | 1.47e-07 | 16 |
muscle cell | 6.21e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.38e-11 | 78 |
somite | 2.66e-08 | 71 |
presomitic mesoderm | 2.66e-08 | 71 |
presumptive segmental plate | 2.66e-08 | 71 |
dermomyotome | 2.66e-08 | 71 |
trunk paraxial mesoderm | 2.66e-08 | 71 |
paraxial mesoderm | 4.50e-08 | 72 |
presumptive paraxial mesoderm | 4.50e-08 | 72 |
dense mesenchyme tissue | 7.47e-08 | 73 |
trunk mesenchyme | 1.51e-07 | 122 |
multilaminar epithelium | 2.23e-07 | 83 |