FFCP PHASE1:Hg19::chr16:1031762..1031781,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30812 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11203 | |||
|TSSclassifier=strong | |||
|UniProt=P57073 | |||
|association_with_transcript=-26bp_to_ENST00000293894,NM_014587,uc002ckn.2_5end | |||
|cluster_id=chr16:1031762..1031781,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SOX8_5end | |||
|id=chr16:1031762..1031781,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.08e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.64e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-41!115;UBERON:0005743!2.57e-41!86;UBERON:0000073!1.08e-40!94;UBERON:0001016!1.08e-40!94;UBERON:0001049!4.30e-39!57;UBERON:0005068!4.30e-39!57;UBERON:0006241!4.30e-39!57;UBERON:0007135!4.30e-39!57;UBERON:0001017!2.45e-38!82;UBERON:0002346!1.18e-33!90;UBERON:0003075!6.54e-33!86;UBERON:0007284!6.54e-33!86;UBERON:0002616!3.02e-31!59;UBERON:0002780!5.10e-31!41;UBERON:0001890!5.10e-31!41;UBERON:0006240!5.10e-31!41;UBERON:0003080!8.27e-30!42;UBERON:0000955!1.27e-29!69;UBERON:0006238!1.27e-29!69;UBERON:0002020!8.18e-27!34;UBERON:0003528!8.18e-27!34;UBERON:0001893!8.82e-27!34;UBERON:0002791!5.72e-26!33;UBERON:0001869!6.29e-25!32;UBERON:0003056!7.05e-24!61;UBERON:0000924!2.21e-23!173;UBERON:0006601!2.21e-23!173;UBERON:0004121!1.65e-22!169;UBERON:0000153!1.14e-20!129;UBERON:0007811!1.14e-20!129;UBERON:0000033!7.52e-20!123;UBERON:0000956!4.95e-19!25;UBERON:0000203!4.95e-19!25;UBERON:0002619!2.79e-17!22;UBERON:0001950!9.62e-16!20;UBERON:0003076!3.05e-10!15;UBERON:0003057!3.05e-10!15;UBERON:0002308!2.82e-09!9;UBERON:0000125!2.82e-09!9;UBERON:0002420!3.90e-09!9;UBERON:0007245!3.90e-09!9;UBERON:0010009!3.90e-09!9;UBERON:0010011!3.90e-09!9;UBERON:0000454!3.90e-09!9;UBERON:0004732!1.12e-08!13;UBERON:0004733!8.07e-08!12;UBERON:0002028!8.07e-08!12;UBERON:0007277!8.07e-08!12;UBERON:0009663!1.53e-07!7;UBERON:0000922!1.70e-07!612;UBERON:0000481!5.46e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.55e-39;34!UBERON:0003528;7.35e-39;34!UBERON:0002020;7.35e-39;34!UBERON:0002791;2.48e-38;32!UBERON:0001869;3.59e-38;32!UBERON:0002780;1.83e-36;41!UBERON:0001890;1.83e-36;41!UBERON:0000073;1.32e-34;53!UBERON:0002616;1.32e-34;53!UBERON:0000956;3.84e-32;25!UBERON:0000203;3.84e-32;25!UBERON:0002619;4.08e-29;22!UBERON:0001950;1.91e-26;20!UBERON:0000955;6.90e-23;68!UBERON:0001017;2.15e-22;75!UBERON:0001016;3.52e-21;83!UBERON:0000125;7.72e-15;9!UBERON:0002308;7.72e-15;9!UBERON:0002420;1.38e-14;9!UBERON:0007245;1.38e-14;9!UBERON:0010009;1.38e-14;9!UBERON:0010011;1.38e-14;9!UBERON:0000454;1.38e-14;9!UBERON:0007023;2.91e-12;114!UBERON:0009663;7.35e-12;7!UBERON:0004732;3.26e-11;13!UBERON:0002298;2.56e-10;6!UBERON:0011216;6.27e-10;132!UBERON:0004733;8.07e-10;12!UBERON:0002028;8.07e-10;12!UBERON:0000200;1.07e-09;6!UBERON:0000349;2.06e-08;5!UBERON:0001872;2.86e-08;5!UBERON:0002021;2.97e-08;5!UBERON:0001871;4.71e-08;6!UBERON:0001894;2.87e-07;7!UBERON:0000369;3.28e-07;4!UBERON:0002435;3.28e-07;4!UBERON:0000204;3.28e-07;4!UBERON:0000922;9.04e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.63e-64,56;UBERON:0005068,2.63e-64,56;UBERON:0006241,2.63e-64,56;UBERON:0007135,2.63e-64,56;UBERON:0001017,4.84e-62,81;UBERON:0001016,9.33e-62,89;UBERON:0000073,9.36e-60,53;UBERON:0002616,9.36e-60,53;UBERON:0002346,1.72e-55,86;UBERON:0003075,2.97e-55,82;UBERON:0007284,2.97e-55,82;UBERON:0002780,2.42e-51,41;UBERON:0001890,2.42e-51,41;UBERON:0003080,2.42e-51,41;UBERON:0006240,2.42e-51,41;UBERON:0000955,8.43e-49,68;UBERON:0006238,8.43e-49,68;UBERON:0003528,1.19e-45,34;UBERON:0002020,1.19e-45,34;UBERON:0001893,1.36e-45,34;UBERON:0010371,6.44e-44,104;UBERON:0002791,1.41e-42,32;UBERON:0001869,2.21e-42,32;UBERON:0003056,5.48e-42,61;UBERON:0004121,5.66e-42,171;UBERON:0000924,5.66e-42,171;UBERON:0006601,5.66e-42,171;UBERON:0007023,1.07e-40,114;UBERON:0010314,2.50e-32,132;UBERON:0000956,3.60e-32,25;UBERON:0000203,3.60e-32,25;UBERON:0002619,3.79e-29,22;UBERON:0011216,2.84e-27,223;UBERON:0001950,1.72e-26,20;UBERON:0000125,7.94e-15,9;UBERON:0002308,7.94e-15,9;UBERON:0002420,1.39e-14,9;UBERON:0007245,1.39e-14,9;UBERON:0010009,1.39e-14,9;UBERON:0010011,1.39e-14,9;UBERON:0000454,1.39e-14,9;UBERON:0003076,8.52e-14,15;UBERON:0003057,8.52e-14,15;UBERON:0000025,4.16e-12,192;UBERON:0009663,7.56e-12,7;UBERON:0004732,3.35e-11,13;UBERON:0002298,2.65e-10,6;UBERON:0004111,6.70e-10,240;UBERON:0000483,7.84e-10,306;UBERON:0004733,8.28e-10,12;UBERON:0002028,8.28e-10,12;UBERON:0007277,8.28e-10,12;UBERON:0000200,1.09e-09,6;UBERON:0000119,1.53e-09,309;UBERON:0000922,2.85e-09,592;UBERON:0000349,2.06e-08,5;UBERON:0001872,2.83e-08,5;UBERON:0002021,2.83e-08,5;UBERON:0001871,4.52e-08,6;UBERON:0000923,6.90e-08,560;UBERON:0010316,6.90e-08,560;UBERON:0005291,6.90e-08,560;UBERON:0006598,6.90e-08,560;UBERON:0010317,6.90e-08,560;UBERON:0002532,6.90e-08,560;UBERON:0002050,1.26e-07,564;UBERON:0005423,2.36e-07,581;UBERON:0001894,2.94e-07,7;UBERON:0006222,2.94e-07,7;UBERON:0000369,3.37e-07,4;UBERON:0002435,3.37e-07,4;UBERON:0000204,3.37e-07,4;UBERON:0010082,3.37e-07,4;UBERON:0001781,6.87e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,4.57977579409691,2.18999080116615,3.64073654824928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,1.86846674698672,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.822405995998037,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0.741432815810302,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0.267440195783507,0.144824403882799,0,0,0.255725123687061,1.44575660953827,0.50133791063589,2.17269778441236,0.795285947051099,5.35298357332899,0.0945348171640679,0,0.087834785693126,6.61444331263449,0,0,1.62273696827342,1.21890816109487,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0.646584227275248,0,0,0,0,0,0,3.41526377162867,1.85541675650079,0.69716365721711,2.798848485415,2.01856680700503,2.18986415445498,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,1.6462960453256,7.3504355692771,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,4.28942498407784,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.968532774145487,0.414656231081544,0.288239906833923,0.25248486685276,0,1.52795370223311,0,1.71072446022705,1.54241239054985,2.10240140490742,0.571652865261156,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.868687840005475,0.61642896765115,1.25342674267927,0,0.591092280605782,0.215627574859517,0.256686072559497,13.9752043322355,5.20559415430487,3.86644406388848,5.69555302136786,6.37938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,7.20601190002797,0.206768026122887,0,0.426910231213777,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0.308419387605311,0.177561725313127,0,0,0,1.20859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,23.080511260475,22.6330105532797,5.85681110395745,0.103041011647722,0.0915694648183434,0,0,0,0,29.7745812339736,0.924291702687866,3.68408819342711,5.37562632689669,0.322260734604821,1.0151168573996,3.15338521439573,19.7651119135757,0,0,0.638063562472921,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,19.2283328029452,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0.146508179271894,0.36408156524854,0,0,0,0,0,15.9063623642608,42.9041720052064,0,0,0.211125408127993,3.38721580026819,2.21027132424918,0,0.306806047506464,0,0,0,0,0,0.789147245095469,0,0,66.8839594805701,34.324196319885,25.9497937401552,0.260427761085233,0,0,0.341380344856499,0,0.236387681767936,0.689486746482929,0,0,29.2294657318567,37.8672817283781,9.15490417902499,11.6108222927786,11.2308095202348,12.9437384320844,0,0,0.538651809526579,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,2.98578579323551,0.353830258013357,0.611030144933625,0,0,0,107.100400306296,4.81546588379273,45.6815669164411,0,0,1.45668227720456,0.789168805698781,0,5.81538247097931,1.32691817219825,0.60129367765797,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0,0,0.52418000472609,0,0,0,0,0.678923115418936,0.706049013532002,9.0392296312213,0,0,25.4509399742632,0.195551382734803,0,0.640358984218058,1.9980960958213,1.15272333723285,0.572682980829578,0,4.60975353562079,0,0,0,0,0,0,55.2386665613006,77.6253498317601,0,0,3.41753560563109,3.0721064139948,1.3749625440701,1.43574604915363,0,0,0,1.20930250476107,0,0,0.0787831823072236,0.247247575143499,0,0.590564889088493,0,7.15706720828373,44.5385137984852,2.25054407851027,1.78801267576404,0.83088067605837,0,0,20.5940997070704,0,0.157611414598396,0.524545881349981,0,0,0,1.42939065274673,0.662091970365432,1.017074150619,0,0,0,0,0.082092520749339,0,0.339936274560377,0,0,45.6368835956273,41.9177347524327,0,0,0,0.314408610199332,0,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,15.0631590594388,10.3722325166669,29.9206324388535,31.5375057629539,31.2819925333923,42.4118432089649,0.138348634936231,0,4.85277176133273,4.85291067026445,0,0.468334905806882,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,2.3489486276869,0,0,0,0.17908884108148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| |||
|short_description=p1@SOX8 | |||
}} |
Latest revision as of 04:17, 20 September 2015
Short description: | p1@SOX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX8_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -26bp_to_ENST00000293894, NM_014587, uc002ckn.2_5end |
EntrezGene: | SOX8 |
HGNC: | 11203 |
UniProt: | P57073 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.08e-07 | 8 |