FFCP PHASE1:Hg19::chr16:57662515..57662526,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4512 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y653,B3KQV4,B4DR54 | |||
|association_with_transcript=96bp_to_ENST00000388812,ENST00000388813,ENST00000456916,ENST00000538815,NM_001145771,NM_001145772,NM_001145773,NM_201524,NM_201525,uc002emd.2,uc002eme.2,uc002emf.2,uc010vhs.1,uc010vht.1_5end | |||
|cluster_id=chr16:57662515..57662526,+ | |||
|coexpression_cluster_id=C2380 | |||
|description=CAGE_peak_8_at_GPR56_5end | |||
|id=chr16:57662515..57662526,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.29e-16!24;CL:0000115!1.67e-12!35;CL:0000071!1.81e-12!18;CL:0002546!1.81e-12!18;CL:0002078!7.86e-12!44;CL:0000213!2.77e-09!57;CL:0000215!2.77e-09!57;CL:1000413!3.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.16e-25;24!CL:0000071;1.22e-18;18!CL:0000115;2.25e-18;36!CL:0002078;2.60e-12;45!CL:1000413;1.59e-10;9!CL:0000213;2.62e-10;58!CL:0000215;2.62e-10;58!CL:0002138;7.40e-08;6!CL:1000497;7.97e-08;17!CL:0002518;7.97e-08;17!CL:1000449;1.59e-07;15!CL:0002544;2.12e-07;6!CL:0002543;2.39e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.48e-25,24;CL:0000115,9.37e-22,36;CL:0002078,3.03e-19,45;CL:0000071,8.27e-19,18;CL:0002546,8.27e-19,18;CL:0000213,1.36e-16,58;CL:0000215,1.36e-16,58;CL:1000413,1.65e-10,9;CL:1000497,4.29e-08,17;CL:0002518,4.29e-08,17;CL:1000449,8.40e-08,15;CL:0005020,9.85e-08,6;CL:0002138,9.85e-08,6;CL:0005022,9.85e-08,6;CL:0002544,2.02e-07,6;CL:0002543,2.56e-07,6;CL:0000222,9.64e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.22e-18;18!CL:0005022;7.40e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.57e-24!57;UBERON:0005068!1.57e-24!57;UBERON:0006241!1.57e-24!57;UBERON:0007135!1.57e-24!57;UBERON:0005743!1.98e-23!86;UBERON:0001017!5.96e-23!82;UBERON:0003075!1.45e-21!86;UBERON:0007284!1.45e-21!86;UBERON:0002616!6.20e-21!59;UBERON:0007023!1.14e-20!115;UBERON:0000073!1.85e-20!94;UBERON:0001016!1.85e-20!94;UBERON:0000955!2.65e-20!69;UBERON:0006238!2.65e-20!69;UBERON:0000025!8.19e-20!194;UBERON:0000477!1.19e-19!286;UBERON:0002346!3.75e-19!90;UBERON:0004111!1.76e-18!241;UBERON:0003080!2.42e-17!42;UBERON:0002780!8.77e-17!41;UBERON:0001890!8.77e-17!41;UBERON:0006240!8.77e-17!41;UBERON:0000119!1.17e-15!312;UBERON:0000483!3.73e-15!309;UBERON:0003056!1.32e-14!61;UBERON:0000033!2.04e-14!123;UBERON:0002020!8.87e-14!34;UBERON:0003528!8.87e-14!34;UBERON:0001893!1.12e-13!34;UBERON:0000153!1.22e-13!129;UBERON:0007811!1.22e-13!129;UBERON:0002791!3.48e-13!33;UBERON:0001869!1.43e-12!32;UBERON:0001986!1.81e-12!18;UBERON:0004638!1.81e-12!18;UBERON:0004852!1.81e-12!18;UBERON:0004121!7.92e-12!169;UBERON:0000924!9.56e-11!173;UBERON:0006601!9.56e-11!173;UBERON:0000487!7.04e-10!22;UBERON:0000956!7.10e-09!25;UBERON:0000203!7.10e-09!25;UBERON:0003076!1.96e-08!15;UBERON:0003057!1.96e-08!15;UBERON:0006914!4.05e-08!25;UBERON:0002619!6.20e-08!22;UBERON:0000481!3.10e-07!347;UBERON:0003915!3.24e-07!9;UBERON:0004700!3.24e-07!9;UBERON:0001917!3.24e-07!9;UBERON:0002049!4.28e-07!79;UBERON:0007798!4.28e-07!79;UBERON:0004732!4.62e-07!13;UBERON:0001950!7.96e-07!20;UBERON:0002308!9.60e-07!9;UBERON:0000125!9.60e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.22e-18;18!UBERON:0001986;1.22e-18;18!UBERON:0004852;1.22e-18;18!UBERON:0000073;2.93e-18;53!UBERON:0002616;2.93e-18;53!UBERON:0001893;1.98e-17;34!UBERON:0002780;4.24e-17;41!UBERON:0001890;4.24e-17;41!UBERON:0003528;4.60e-17;34!UBERON:0002020;4.60e-17;34!UBERON:0001869;2.41e-16;32!UBERON:0002791;2.48e-16;32!UBERON:0000487;4.75e-14;22!UBERON:0000956;2.31e-12;25!UBERON:0000203;2.31e-12;25!UBERON:0001017;2.66e-12;75!UBERON:0002619;5.70e-12;22!UBERON:0006914;1.31e-11;25!UBERON:0000955;2.59e-11;68!UBERON:0001016;7.29e-11;83!UBERON:0003915;1.59e-10;9!UBERON:0004700;1.59e-10;9!UBERON:0001917;1.59e-10;9!UBERON:0001950;3.34e-10;20!UBERON:0000125;8.72e-10;9!UBERON:0002308;8.72e-10;9!UBERON:0004732;2.30e-09;13!UBERON:0000489;5.96e-09;29!UBERON:0004733;1.10e-08;12!UBERON:0002028;1.10e-08;12!UBERON:0009663;7.70e-08;7!UBERON:0002113;1.02e-07;24!UBERON:0011143;1.02e-07;24!UBERON:0002420;1.30e-07;9!UBERON:0007245;1.30e-07;9!UBERON:0010009;1.30e-07;9!UBERON:0010011;1.30e-07;9!UBERON:0000454;1.30e-07;9!UBERON:0000490;1.32e-07;33!UBERON:0006555;1.59e-07;15!UBERON:0004819;1.59e-07;15!UBERON:0001285;1.59e-07;15!UBERON:0007684;1.59e-07;15!UBERON:0006554;2.06e-07;30!UBERON:0001008;2.06e-07;30!UBERON:0002298;2.32e-07;6!UBERON:0007023;4.90e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.28e-34,56;UBERON:0005068,2.28e-34,56;UBERON:0006241,2.28e-34,56;UBERON:0007135,2.28e-34,56;UBERON:0000073,2.02e-31,53;UBERON:0002616,2.02e-31,53;UBERON:0001017,8.80e-30,81;UBERON:0003075,1.29e-27,82;UBERON:0007284,1.29e-27,82;UBERON:0000955,2.99e-26,68;UBERON:0006238,2.99e-26,68;UBERON:0001016,5.09e-26,89;UBERON:0002346,2.00e-25,86;UBERON:0000025,1.01e-24,192;UBERON:0002780,1.01e-23,41;UBERON:0001890,1.01e-23,41;UBERON:0003080,1.01e-23,41;UBERON:0006240,1.01e-23,41;UBERON:0004111,7.28e-21,240;UBERON:0007023,1.28e-20,114;UBERON:0010371,1.45e-20,104;UBERON:0003056,2.78e-20,61;UBERON:0003528,3.52e-20,34;UBERON:0002020,3.52e-20,34;UBERON:0001893,5.09e-20,34;UBERON:0004638,8.27e-19,18;UBERON:0001986,8.27e-19,18;UBERON:0004852,8.27e-19,18;UBERON:0002791,2.62e-18,32;UBERON:0001869,2.77e-18,32;UBERON:0010314,1.33e-17,132;UBERON:0000119,1.01e-15,309;UBERON:0000483,1.06e-15,306;UBERON:0000487,3.51e-14,22;UBERON:0000956,1.69e-12,25;UBERON:0000203,1.69e-12,25;UBERON:0002619,4.14e-12,22;UBERON:0004121,7.36e-12,171;UBERON:0000924,7.36e-12,171;UBERON:0006601,7.36e-12,171;UBERON:0003076,9.34e-12,15;UBERON:0003057,9.34e-12,15;UBERON:0006914,1.02e-11,25;UBERON:0003915,1.65e-10,9;UBERON:0004700,1.65e-10,9;UBERON:0001917,1.65e-10,9;UBERON:0001950,2.42e-10,20;UBERON:0000125,9.08e-10,9;UBERON:0002308,9.08e-10,9;UBERON:0004732,1.28e-09,13;UBERON:0004733,6.78e-09,12;UBERON:0002028,6.78e-09,12;UBERON:0007277,6.78e-09,12;UBERON:0000489,2.45e-08,31;UBERON:0000055,4.23e-08,68;UBERON:0004211,8.40e-08,15;UBERON:0009773,8.40e-08,15;UBERON:0001231,8.40e-08,15;UBERON:0001285,8.40e-08,15;UBERON:0007684,8.40e-08,15;UBERON:0004208,8.40e-08,15;UBERON:0009663,8.60e-08,7;UBERON:0002420,1.33e-07,9;UBERON:0007245,1.33e-07,9;UBERON:0010009,1.33e-07,9;UBERON:0010011,1.33e-07,9;UBERON:0000454,1.33e-07,9;UBERON:0002049,1.39e-07,78;UBERON:0007798,1.39e-07,78;UBERON:0002298,1.71e-07,6;UBERON:0006555,4.10e-07,16;UBERON:0004819,4.10e-07,16;UBERON:0002113,4.51e-07,26;UBERON:0003918,4.51e-07,26;UBERON:0011143,4.51e-07,26;UBERON:0005095,4.51e-07,26;UBERON:0007687,4.51e-07,26;UBERON:0000200,9.01e-07,6 | |||
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| |||
|short_description=p8@GPR56 | |||
}} |
Latest revision as of 04:13, 17 September 2015
Short description: | p8@GPR56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GPR56_5end |
Coexpression cluster: | C2380_Melanocyte_mesothelioma_Renal_Neural_renal_Endothelial_Hepatic |
Association with transcript: | 96bp_to_ENST00000388812, ENST00000388813, ENST00000456916, ENST00000538815, NM_001145771, NM_001145772, NM_001145773, NM_201524, NM_201525, uc002emd.2, uc002eme.2, uc002emf.2, uc010vhs.1, uc010vht.1_5end |
EntrezGene: | GPR56 |
HGNC: | 4512 |
UniProt: | Q9Y653B3KQV4B4DR54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.48e-25 | 24 |
endothelial cell | 9.37e-22 | 36 |
meso-epithelial cell | 3.03e-19 | 45 |
blood vessel endothelial cell | 8.27e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.27e-19 | 18 |
lining cell | 1.36e-16 | 58 |
barrier cell | 1.36e-16 | 58 |
endothelial cell of artery | 1.65e-10 | 9 |
kidney cell | 4.29e-08 | 17 |
kidney epithelial cell | 4.29e-08 | 17 |
epithelial cell of nephron | 8.40e-08 | 15 |
lymphangioblast | 9.85e-08 | 6 |
endothelial cell of lymphatic vessel | 9.85e-08 | 6 |
vascular lymphangioblast | 9.85e-08 | 6 |
aortic endothelial cell | 2.02e-07 | 6 |
vein endothelial cell | 2.56e-07 | 6 |
mesodermal cell | 9.64e-07 | 121 |